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9071 Publications


2008 | Journal Article | IST-REx-ID: 3036
Dubrovsky J, Sauer M, Napsucialy Mendivil S, Ivanchenko M, Friml J, Shishkova S, Celenza J, Benková E. 2008. Auxin acts as a local morphogenetic trigger to specify lateral root founder cells. PNAS. 105(25), 8790–8794.
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2008 | Journal Article | IST-REx-ID: 3030
Růčková E, Friml J, Procházková Schrumpfová P, Fajkus J. 2008. Role of alternative telomere lengthening unmasked in telomerase knock-out mutant plants. Plant Molecular Biology. 66(6), 637–646.
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2008 | Journal Article | IST-REx-ID: 3032
Kleine Vehn J, Dhonukshe P, Sauer M, Brewer P, Wiśniewska J, Paciorek T, Benková E, Friml J. 2008. ARF GEF dependent transcytosis and polar delivery of PIN auxin carriers in Arabidopsis. Current Biology. 18(7), 526–531.
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2008 | Book Chapter | IST-REx-ID: 3035
Sauer M, Friml J. 2008.In vitro culture of Arabidopsis embryos . In: Plant Embryogenesis. Methods In Molecular Biology, vol. 427, 71–76.
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2008 | Book Chapter | IST-REx-ID: 3033
Sauer M, Friml J. 2008.Visualization of auxin gradients in embryogenesis . In: Plant Embryogenesis. Methods In Molecular Biology, vol. 427, 137–144.
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2008 | Journal Article | IST-REx-ID: 3037 | OA
Feraru E, Friml J. 2008. PIN polar targeting. Plant Physiology. 147(4), 1553–1559.
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2008 | Journal Article | IST-REx-ID: 3034
Friml J, Sauer M. 2008. Plant biology: In their neighbour’s shadow. Nature. 453(7193), 298–299.
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2008 | Journal Article | IST-REx-ID: 3196
Szeliski R, Zabih R, Scharstein D, Veksler O, Kolmogorov V, Agarwala A, Tappen M, Rother C. 2008. A comparative study of energy minimization methods for Markov random fields with smoothness-based priors. IEEE Transactions on Pattern Analysis and Machine Intelligence. 30(6), 1068–1080.
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2008 | Conference Paper | IST-REx-ID: 3198
Torresani L, Kolmogorov V, Rother C. 2008. Feature correspondence via graph matching: Models and global optimization. ECCV: European Conference on Computer Vision, LNCS, vol. 5303, 596–609.
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2008 | Conference Paper | IST-REx-ID: 3195
Vicente S, Kolmogorov V, Rother C. 2008. Graph cut based image segmentation with connectivity priors. CVPR: Computer Vision and Pattern Recognition.
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2008 | Conference Paper | IST-REx-ID: 3224
Dodis Y, Pietrzak KZ, Puniya P. 2008. A new mode of operation for block ciphers and length preserving MACs. EUROCRYPT: Theory and Applications of Cryptographic Techniques, LNCS, vol. 4965, 198–219.
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2008 | Conference Paper | IST-REx-ID: 3225
Fischlin M, Lehmann A, Pietrzak KZ. 2008. Robust multi property combiners for hash functions revisited. ICALP: Automata, Languages and Programming, LNCS, vol. 5126, 655–666.
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2008 | Journal Article | IST-REx-ID: 3291
Schmalhorst PS, Krappmann S, Vervecken W, Rohde M, Müller M, Braus G, Contreras R, Braun A, Bakker H, Routier F. 2008. Contribution of galactofuranose to the virulence of the opportunistic pathogen Aspergillus fumigatus. Eukaryotic Cell. 7(8), 1268–1277.
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2008 | Journal Article | IST-REx-ID: 3307 | OA
Green R, Malaspinas A, Krause J, Briggs A, Johnson P, Uhler C, Meyer M, Good J, Maricic T, Stenzel U, Prüfer K, Siebauer M, Burbano H, Ronan M, Rothberg J, Egholm M, Rudan P, Brajković D, Kućan Ž, Gušić I, Wikström M, Laakkonen L, Kelso J, Slatkin M, Pääbo S. 2008. A complete neandertal mitochondrial genome sequence determined by highhhroughput sequencing. Cell. 134, 416–426.
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2008 | Journal Article | IST-REx-ID: 3435 | OA
Bollback JP, York T, Nielsen R. 2008. Estimation of 2Nes From Temporal Allele Frequency Data. Genetics. 179(1), 497–502.
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2008 | Journal Article | IST-REx-ID: 3516
Huxter J, Senior T, Allen K, Csicsvari JL. 2008. Theta phase-specific codes for two-dimensional position, trajectory and heading in the hippocampus. Nature Neuroscience. 11(5), 587–594.
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2008 | Journal Article | IST-REx-ID: 3530
Fuentealba P, Begum R, Capogna M, Jinno S, Marton L, Csicsvari JL, Thomson A, Somogyi P, Klausberger T. 2008. Ivy cells: A population of nitric-oxide-producing, slow-spiking GABAergic neurons and their involvement in hippocampal network activity. Neuron. 57(6), 917–929.
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2008 | Journal Article | IST-REx-ID: 3544
Mallet N, Pogosyan A, Sharott A, Csicsvari JL, Bolam J, Brown P, Magill P. 2008. Disrupted dopamine transmission and the emergence of exaggerated beta oscillations in subthalamic nucleus and cerebral cortex. Journal of Neuroscience. 28(18), 4795–4806.
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2008 | Book Chapter | IST-REx-ID: 3577
Biasotti S, Attali D, Boissonnat J, Edelsbrunner H, Elber G, Mortara M, Sanniti Di Baja G, Spagnuolo M, Tanase M, Veltkam R. 2008.Skeletal structures. In: Shape Analysis and Structuring. Mathematics and Visualization, , 145–183.
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2008 | Journal Article | IST-REx-ID: 3591
Ulrich F, Heisenberg C-PJ. 2008. Probing E-cadherin endocytosis by morpholino-mediated Rab5 knock-down in zebrafish. Methods in Molecular Biology. 440, 371–387.
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2008 | Conference Paper | IST-REx-ID: 3599
Yang E, Erdogan A, Arslan T, Barton NH. 2008. Adaptive formation control and bio-inspired optimization of a cluster-based satellite wireless sensor network . AHS: NASA/ESA Conference on Adaptive Hardware and Systems, 432–439.
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2008 | Conference Paper | IST-REx-ID: 3698
Blaschko M, Lampert C, Gretton A. 2008. Semi-supervised Laplacian regularization of kernel canonical correlation analysis. ECML: European Conference on Machine Learning, LNCS, vol. 5211, 133–145.
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2008 | Conference Paper | IST-REx-ID: 3694
Goldstein M, Lampert C, Reif M, Stahl A, Breuel T. 2008. Bayes optimal DDoS mitigation by adaptive history-based IP filtering. ICN: International Conference on Networking, 174–179.
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2008 | Conference Paper | IST-REx-ID: 3706
Lampert C, Blaschko M. 2008. Joint kernel support estimation for structured prediction. NIPS SISO: NIPS Workshop on ‘Structured Input - Structured Output’, 1–4.
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2008 | Conference Paper | IST-REx-ID: 3712
Blaschko M, Lampert C. 2008. Correlational spectral clustering. CVPR: Computer Vision and Pattern Recognition, 1–8.
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2008 | Book Chapter | IST-REx-ID: 3726
Engel A, Janovjak HL, Fotiadis D, Kedrov A, Cisneros D, Mueller D. 2008.Single-molecule microscopy and force spectroscopy of membrane proteins. In: Single Molecules and Nanotechnology. vol. 12, 279–311.
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2008 | Journal Article | IST-REx-ID: 3739
Tkačik G, Callan C, Bialek W. 2008. Information capacity of genetic regulatory elements. Physical Review E Statistical Nonlinear and Soft Matter Physics. 78(1).
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2008 | Journal Article | IST-REx-ID: 3740 | OA
Tkačik G, Callan C, Bialek W. 2008. Information flow and optimization in transcriptional regulation. PNAS. 105(34), 12265–12270.
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2008 | Journal Article | IST-REx-ID: 3744 | OA
Tkačik G, Magnasco M. 2008. Decoding spike timing: The differential reverse-correlation method. Biosystems. 93(1–2), 90–100.
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2008 | Journal Article | IST-REx-ID: 3760
Wojtan C, Turk G. 2008. Fast viscoelastic behavior with thin features. ACM Transactions on Graphics. 27(3).
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2008 | Journal Article | IST-REx-ID: 3825 | OA
Aponte Y, Bischofberger J, Jonas PM. 2008. Efficient Ca(2+) buffering in fast-spiking basket cells of rat hippocampus. Journal of Physiology. 586(8), 2061–75.
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2008 | Journal Article | IST-REx-ID: 3822 | OA
Schmidt Hieber C, Jonas PM, Bischofberger J. 2008. Action potential initiation and propagation in hippocampal mossy fibre axons. Journal of Physiology. 586(7), 1849–57.
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2008 | Journal Article | IST-REx-ID: 3824
Bucurenciu I, Kulik Á, Schwaller B, Frotscher M, Jonas PM. 2008. Nanodomain coupling between Ca(2+) channels and Ca2+ sensors promotes fast and efficient transmitter release at a cortical GABAergic synapse. Neuron. 57(4), 536–45.
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2008 | Journal Article | IST-REx-ID: 3823
Kerr A, Jonas PM. 2008. The two sides of hippocampal mossy fiber plasticity (Review). Neuron. 57(1), 5–7.
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2008 | Conference Paper | IST-REx-ID: 3880
Berwanger D, Chatterjee K, Doyen L, Henzinger TA, Raje S. 2008. Strategy construction for parity games with imperfect information. CONCUR: Concurrency Theory, LNCS, vol. 5201, 325–339.
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2008 | Journal Article | IST-REx-ID: 3903
Ugelvig LV, Drijfhout F, Kronauer D, Boomsma J, Pedersen J, Cremer S. 2008. The introduction history of invasive garden ants in Europe: integrating genetic, chemical and behavioural approaches. BMC Biology. 6(11).
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2008 | Journal Article | IST-REx-ID: 3905
Cremer S, D’Ettorre P, Drijfhout F, Sledge M, Turillazzi S, Heinze J. 2008. Imperfect chemical female mimicry in males of the ant Cardiocondyla obscurior. Naturwissenschaften. 95(11), 1101–1105.
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2008 | Journal Article | IST-REx-ID: 3907
Suefuji M, Cremer S, Oettler J, Heinze J. 2008. Queen number influences the timing of the sexual production in colonies of Cardiocondyla ants. Biology Letters. 4(6), 670–673.
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2008 | Journal Article | IST-REx-ID: 3906
Cremer S, Ugelvig LV, Drijfhout F, Schlick Steiner B, Steiner F, Seifert B, Hughes D, Schulz A, Petersen K, Konrad H, Stauffer C, Kiran K, Espadaler X, D’Ettorre P, Aktaç N, Eilenberg J, Jones G, Nash D, Pedersen J, Boomsma J. 2008. The evolution of invasiveness in garden ants. PLoS One. 3(12).
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2008 | Journal Article | IST-REx-ID: 3939
Lämmermann T, Sixt MK. 2008. The microanatomy of T-cell responses. Immunological Reviews. 221(1), 26–43.
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2008 | Journal Article | IST-REx-ID: 3940
Lokmic Z, Lämmermann T, Sixt MK, Cardell S, Hallmann R, Sorokin L. 2008. The extracellular matrix of the spleen as a potential organizer of immune cell compartments. Seminars in Immunology. 20(1), 4–13.
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2008 | Journal Article | IST-REx-ID: 3970
Dequéant M, Ahnert S, Edelsbrunner H, Fink T, Glynn E, Hattem G, Kudlicki A, Mileyko Y, Morton J, Mushegian A, Pachter L, Rowicka M, Shiu A, Sturmfels B, Pourquie O. 2008. Comparison of pattern detection methods in microarray time series of the segmentation clock. PLoS One. 3(8).
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2008 | Journal Article | IST-REx-ID: 3971
Edelsbrunner H, Harer J, Mascarenhas A, Pascucci V, Snoeyink J. 2008. Time-varying Reeb graphs for continuous space-time data. Computational Geometry: Theory and Applications. 41(3), 149–166.
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2008 | Book Chapter | IST-REx-ID: 3969
Edelsbrunner H, Harer J. 2008.Persistent homology - a survey. In: Surveys on Discrete and Computational Geometry: Twenty Years Later. Contemporary Mathematics, , 257–282.
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2008 | Journal Article | IST-REx-ID: 4141
Vervenne H, Crombez K, Lambaerts K, Carvalho L, Köppen M, Heisenberg C-PJ, Van De Ven W, Petit M. 2008. Lpp is involved in Wnt/PCP signaling and acts together with Scrib to mediate convergence and extension movements during zebrafish gastrulation. Developmental Biology. 320(1), 267–277.
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2008 | Journal Article | IST-REx-ID: 4161
Oteíza P, Köppen M, Concha M, Heisenberg C-PJ. 2008. Origin and shaping of the laterality organ in zebrafish. Development. 135(16), 2807–2813.
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2008 | Journal Article | IST-REx-ID: 4190
Kai M, Heisenberg C-PJ, Tada M. 2008. Sphingosine-1-phosphate receptors regulate individual cell behaviours underlying the directed migration of prechordal plate progenitor cells during zebrafish gastrulation. Development. 135(18), 3043–3051.
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2008 | Conference Paper | IST-REx-ID: 4384 | OA
Guerraoui R, Henzinger TA, Jobstmann B, Singh V. 2008. Model checking transactional memories. PLDI: Programming Languages Design and Implementation, 372–382.
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2008 | Conference Paper | IST-REx-ID: 4386
Guerraoui R, Henzinger TA, Singh V. 2008. Permissiveness in transactional memories. DISC: Distributed Computing, LNCS, vol. 5218, 305–319.
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2008 | Conference Paper | IST-REx-ID: 4387
Guerraoui R, Henzinger TA, Singh V. 2008. Completeness and nondeterminism in model checking transactional memories. CONCUR: Concurrency Theory, LNCS, vol. 5201, 21–35.
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