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9067 Publications
2008 | Journal Article | IST-REx-ID: 3038
Swarup K, Benková E, Swarup R, Casimiro I, Péret B, Yang Y, Parry G, Nielsen E, De Smet I, Vanneste S, Levesque M, Carrier D, James N, Calvo V, Ljung K, Kramer E, Roberts R, Graham N, Marillonnet S, Patel K, Jones J, Taylor C, Schachtman D, May S, Sandberg G, Benfey P, Friml J, Kerr I, Beeckman T, Laplaze L, Bennett M. 2008. The auxin influx carrier LAX3 promotes lateral root emergence. Nature Cell Biology. 10(8), 946–954.
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2008 | Journal Article | IST-REx-ID: 3036
Dubrovsky, J., Sauer, M., Napsucialy Mendivil, S., Ivanchenko, M., Friml, J., Shishkova, S., … Benková, E. (2008). Auxin acts as a local morphogenetic trigger to specify lateral root founder cells. PNAS. National Academy of Sciences. https://doi.org/10.1073/pnas.0712307105
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2008 | Journal Article | IST-REx-ID: 3030
Růčková, E., Friml, J., Procházková Schrumpfová, P., & Fajkus, J. (2008). Role of alternative telomere lengthening unmasked in telomerase knock-out mutant plants. Plant Molecular Biology. Springer. https://doi.org/10.1007/s11103-008-9295-7
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2008 | Journal Article | IST-REx-ID: 3032
Kleine Vehn, J., Dhonukshe, P., Sauer, M., Brewer, P., Wiśniewska, J., Paciorek, T., … Friml, J. (2008). ARF GEF dependent transcytosis and polar delivery of PIN auxin carriers in Arabidopsis. Current Biology. Cell Press. https://doi.org/10.1016/j.cub.2008.03.021
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2008 | Book Chapter | IST-REx-ID: 3035
Sauer, M., & Friml, J. (2008). In vitro culture of Arabidopsis embryos . In M. Suárez & P. Bozhkov (Eds.), Plant Embryogenesis (Vol. 427, pp. 71–76). Humana Press. https://doi.org/10.1007/978-1-59745-273-1_5
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2008 | Book Chapter | IST-REx-ID: 3033
Sauer, M., & Friml, J. (2008). Visualization of auxin gradients in embryogenesis . In M. Suárez & P. Bozhkov (Eds.), Plant Embryogenesis (Vol. 427, pp. 137–144). Humana Press. https://doi.org/10.1007/978-1-59745-273-1_11
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2008 | Journal Article | IST-REx-ID: 3037 | 
Feraru, E., & Friml, J. (2008). PIN polar targeting. Plant Physiology. American Society of Plant Biologists. https://doi.org/10.1104/pp.108.121756
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2008 | Journal Article | IST-REx-ID: 3034
Friml, J., & Sauer, M. (2008). Plant biology: In their neighbour’s shadow. Nature. Nature Publishing Group. https://doi.org/10.1038/453298a
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2008 | Journal Article | IST-REx-ID: 3196
Szeliski, R., Zabih, R., Scharstein, D., Veksler, O., Kolmogorov, V., Agarwala, A., … Rother, C. (2008). A comparative study of energy minimization methods for Markov random fields with smoothness-based priors. IEEE Transactions on Pattern Analysis and Machine Intelligence. IEEE. https://doi.org/10.1109/TPAMI.2007.70844
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2008 | Conference Paper | IST-REx-ID: 3198
Torresani, L., Kolmogorov, V., & Rother, C. (2008). Feature correspondence via graph matching: Models and global optimization (Vol. 5303, pp. 596–609). Presented at the ECCV: European Conference on Computer Vision, Springer. https://doi.org/10.1007/978-3-540-88688-4_44
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2008 | Conference Paper | IST-REx-ID: 3195
Vicente, S., Kolmogorov, V., & Rother, C. (2008). Graph cut based image segmentation with connectivity priors. Presented at the CVPR: Computer Vision and Pattern Recognition, IEEE. https://doi.org/10.1109/CVPR.2008.4587440
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2008 | Conference Paper | IST-REx-ID: 3224
Dodis, Y., Pietrzak, K. Z., & Puniya, P. (2008). A new mode of operation for block ciphers and length preserving MACs (Vol. 4965, pp. 198–219). Presented at the EUROCRYPT: Theory and Applications of Cryptographic Techniques, Springer. https://doi.org/10.1007/978-3-540-78967-3_12
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2008 | Conference Paper | IST-REx-ID: 3225
Fischlin, M., Lehmann, A., & Pietrzak, K. Z. (2008). Robust multi property combiners for hash functions revisited (Vol. 5126, pp. 655–666). Presented at the ICALP: Automata, Languages and Programming, Springer. https://doi.org/10.1007/978-3-540-70583-3_53
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2008 | Journal Article | IST-REx-ID: 3291
Schmalhorst, P. S., Krappmann, S., Vervecken, W., Rohde, M., Müller, M., Braus, G., … Routier, F. (2008). Contribution of galactofuranose to the virulence of the opportunistic pathogen Aspergillus fumigatus. Eukaryotic Cell. American Society for Microbiology. https://doi.org/10.1128/EC.00065-08
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2008 | Journal Article | IST-REx-ID: 3307 |
Green R, Malaspinas A, Krause J, Briggs A, Johnson P, Uhler C, Meyer M, Good J, Maricic T, Stenzel U, Prüfer K, Siebauer M, Burbano H, Ronan M, Rothberg J, Egholm M, Rudan P, Brajković D, Kućan Ž, Gušić I, Wikström M, Laakkonen L, Kelso J, Slatkin M, Pääbo S. 2008. A complete neandertal mitochondrial genome sequence determined by highhhroughput sequencing. Cell. 134, 416–426.
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2008 | Journal Article | IST-REx-ID: 3435 |
Bollback, J. P., York, T., & Nielsen, R. (2008). Estimation of 2Nes From Temporal Allele Frequency Data. Genetics. Genetics Society of America. https://doi.org/10.1534/genetics.107.085019
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2008 | Journal Article | IST-REx-ID: 3516
Huxter, J., Senior, T., Allen, K., & Csicsvari, J. L. (2008). Theta phase-specific codes for two-dimensional position, trajectory and heading in the hippocampus. Nature Neuroscience. Nature Publishing Group. https://doi.org/10.1038/nn.2106
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2008 | Journal Article | IST-REx-ID: 3530
Fuentealba, P., Begum, R., Capogna, M., Jinno, S., Marton, L., Csicsvari, J. L., … Klausberger, T. (2008). Ivy cells: A population of nitric-oxide-producing, slow-spiking GABAergic neurons and their involvement in hippocampal network activity. Neuron. Elsevier. https://doi.org/10.1016/j.neuron.2008.01.034
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2008 | Journal Article | IST-REx-ID: 3544
Mallet, N., Pogosyan, A., Sharott, A., Csicsvari, J. L., Bolam, J., Brown, P., & Magill, P. (2008). Disrupted dopamine transmission and the emergence of exaggerated beta oscillations in subthalamic nucleus and cerebral cortex. Journal of Neuroscience. Society for Neuroscience. https://doi.org/10.1523/JNEUROSCI.0123-08.2008
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2008 | Book Chapter | IST-REx-ID: 3577
Biasotti, S., Attali, D., Boissonnat, J., Edelsbrunner, H., Elber, G., Mortara, M., … Veltkam, R. (2008). Skeletal structures. In Shape Analysis and Structuring (pp. 145–183). Springer. https://doi.org/10.1007/978-3-540-33265-7_5
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2008 | Journal Article | IST-REx-ID: 3591
Ulrich, F., & Heisenberg, C.-P. J. (2008). Probing E-cadherin endocytosis by morpholino-mediated Rab5 knock-down in zebrafish. Methods in Molecular Biology. Springer. https://doi.org/10.1007/978-1-59745-178-9_27
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2008 | Conference Paper | IST-REx-ID: 3599
Yang, E., Erdogan, A., Arslan, T., & Barton, N. H. (2008). Adaptive formation control and bio-inspired optimization of a cluster-based satellite wireless sensor network (pp. 432–439). Presented at the AHS: NASA/ESA Conference on Adaptive Hardware and Systems, IEEE. https://doi.org/10.1109/AHS.2008.60
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2008 | Conference Paper | IST-REx-ID: 3698
Blaschko, M., Lampert, C., & Gretton, A. (2008). Semi-supervised Laplacian regularization of kernel canonical correlation analysis (Vol. 5211, pp. 133–145). Presented at the ECML: European Conference on Machine Learning, Springer. https://doi.org/10.1007/978-3-540-87479-9_27
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2008 | Conference Paper | IST-REx-ID: 3694
Goldstein, M., Lampert, C., Reif, M., Stahl, A., & Breuel, T. (2008). Bayes optimal DDoS mitigation by adaptive history-based IP filtering (pp. 174–179). Presented at the ICN: International Conference on Networking, IEEE. https://doi.org/10.1109/ICN.2008.64
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2008 | Conference Paper | IST-REx-ID: 3706
Lampert, C., & Blaschko, M. (2008). Joint kernel support estimation for structured prediction (pp. 1–4). Presented at the NIPS SISO: NIPS Workshop on “Structured Input - Structured Output,” Curran Associates, Inc.
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2008 | Conference Paper | IST-REx-ID: 3712
Blaschko, M., & Lampert, C. (2008). Correlational spectral clustering (pp. 1–8). Presented at the CVPR: Computer Vision and Pattern Recognition, IEEE. https://doi.org/10.1109/CVPR.2008.4587353
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2008 | Book Chapter | IST-REx-ID: 3726
Engel, A., Janovjak, H. L., Fotiadis, D., Kedrov, A., Cisneros, D., & Mueller, D. (2008). Single-molecule microscopy and force spectroscopy of membrane proteins. In Single Molecules and Nanotechnology (Vol. 12, pp. 279–311). Springer. https://doi.org/10.1007/978-3-540-73924-1_11
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2008 | Journal Article | IST-REx-ID: 3739
Tkačik, G., Callan, C., & Bialek, W. (2008). Information capacity of genetic regulatory elements. Physical Review E Statistical Nonlinear and Soft Matter Physics. American Institute of Physics. https://doi.org/10.1103/PhysRevE.78.011910
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2008 | Journal Article | IST-REx-ID: 3740 |
Tkačik, G., Callan, C., & Bialek, W. (2008). Information flow and optimization in transcriptional regulation. PNAS. National Academy of Sciences. https://doi.org/10.1073/pnas.0806077105
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2008 | Journal Article | IST-REx-ID: 3744 |
Tkačik, G., & Magnasco, M. (2008). Decoding spike timing: The differential reverse-correlation method. Biosystems. Elsevier. https://doi.org/10.1016/j.biosystems.2008.04.011
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2008 | Journal Article | IST-REx-ID: 3760
Wojtan, C., & Turk, G. (2008). Fast viscoelastic behavior with thin features. ACM Transactions on Graphics. ACM. https://doi.org/10.1145/1360612.1360646
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2008 | Journal Article | IST-REx-ID: 3825 |
Aponte, Y., Bischofberger, J., & Jonas, P. M. (2008). Efficient Ca(2+) buffering in fast-spiking basket cells of rat hippocampus. Journal of Physiology. Wiley-Blackwell. https://doi.org/10.1113/jphysiol.2007.147298
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2008 | Journal Article | IST-REx-ID: 3822 |
Schmidt Hieber, C., Jonas, P. M., & Bischofberger, J. (2008). Action potential initiation and propagation in hippocampal mossy fibre axons. Journal of Physiology. Wiley-Blackwell. https://doi.org/10.1113/jphysiol.2007.150151
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2008 | Journal Article | IST-REx-ID: 3824
Bucurenciu, I., Kulik, Á., Schwaller, B., Frotscher, M., & Jonas, P. M. (2008). Nanodomain coupling between Ca(2+) channels and Ca2+ sensors promotes fast and efficient transmitter release at a cortical GABAergic synapse. Neuron. Elsevier. https://doi.org/10.1016/j.neuron.2007.12.026
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2008 | Journal Article | IST-REx-ID: 3823
Kerr, A., & Jonas, P. M. (2008). The two sides of hippocampal mossy fiber plasticity (Review). Neuron. Elsevier. https://doi.org/10.1016/j.neuron.2007.12.015
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2008 | Conference Paper | IST-REx-ID: 3880
Berwanger, D., Chatterjee, K., Doyen, L., Henzinger, T. A., & Raje, S. (2008). Strategy construction for parity games with imperfect information (Vol. 5201, pp. 325–339). Presented at the CONCUR: Concurrency Theory, Schloss Dagstuhl - Leibniz-Zentrum für Informatik. https://doi.org/10.1007/978-3-540-85361-9
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2008 | Journal Article | IST-REx-ID: 3903
Ugelvig, L. V., Drijfhout, F., Kronauer, D., Boomsma, J., Pedersen, J., & Cremer, S. (2008). The introduction history of invasive garden ants in Europe: integrating genetic, chemical and behavioural approaches. BMC Biology. BioMed Central. https://doi.org/10.1186/1741-7007-6-11
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2008 | Journal Article | IST-REx-ID: 3905
Cremer, S., D’Ettorre, P., Drijfhout, F., Sledge, M., Turillazzi, S., & Heinze, J. (2008). Imperfect chemical female mimicry in males of the ant Cardiocondyla obscurior. Naturwissenschaften. Springer. https://doi.org/10.1007/s00114-008-0430-8
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2008 | Journal Article | IST-REx-ID: 3907
Suefuji, M., Cremer, S., Oettler, J., & Heinze, J. (2008). Queen number influences the timing of the sexual production in colonies of Cardiocondyla ants. Biology Letters. Royal Society, The. https://doi.org/10.1098/rsbl.2008.0355
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2008 | Journal Article | IST-REx-ID: 3906
Cremer, S., Ugelvig, L. V., Drijfhout, F., Schlick Steiner, B., Steiner, F., Seifert, B., … Boomsma, J. (2008). The evolution of invasiveness in garden ants. PLoS One. Public Library of Science. https://doi.org/10.1371/journal.pone.0003838
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2008 | Journal Article | IST-REx-ID: 3939
Lämmermann, T., & Sixt, M. K. (2008). The microanatomy of T-cell responses. Immunological Reviews. Wiley-Blackwell. https://doi.org/10.1111/j.1600-065X.2008.00592.x
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2008 | Journal Article | IST-REx-ID: 3940
Lokmic, Z., Lämmermann, T., Sixt, M. K., Cardell, S., Hallmann, R., & Sorokin, L. (2008). The extracellular matrix of the spleen as a potential organizer of immune cell compartments. Seminars in Immunology. Academic Press. https://doi.org/10.1016/j.smim.2007.12.009
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2008 | Journal Article | IST-REx-ID: 3970
Dequéant, M., Ahnert, S., Edelsbrunner, H., Fink, T., Glynn, E., Hattem, G., … Pourquie, O. (2008). Comparison of pattern detection methods in microarray time series of the segmentation clock. PLoS One. Public Library of Science. https://doi.org/10.1371/journal.pone.0002856
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2008 | Journal Article | IST-REx-ID: 3971
Edelsbrunner, H., Harer, J., Mascarenhas, A., Pascucci, V., & Snoeyink, J. (2008). Time-varying Reeb graphs for continuous space-time data. Computational Geometry: Theory and Applications. Elsevier. https://doi.org/10.1016/j.comgeo.2007.11.001
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2008 | Book Chapter | IST-REx-ID: 3969
Edelsbrunner, H., & Harer, J. (2008). Persistent homology - a survey. In Surveys on Discrete and Computational Geometry: Twenty Years Later (pp. 257–282). American Mathematical Society.
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2008 | Journal Article | IST-REx-ID: 4141
Vervenne, H., Crombez, K., Lambaerts, K., Carvalho, L., Köppen, M., Heisenberg, C.-P. J., … Petit, M. (2008). Lpp is involved in Wnt/PCP signaling and acts together with Scrib to mediate convergence and extension movements during zebrafish gastrulation. Developmental Biology. Elsevier. https://doi.org/10.1016/j.ydbio.2008.05.529
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2008 | Journal Article | IST-REx-ID: 4161
Oteíza, P., Köppen, M., Concha, M., & Heisenberg, C.-P. J. (2008). Origin and shaping of the laterality organ in zebrafish. Development. Company of Biologists. https://doi.org/10.1242/dev.022228
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2008 | Journal Article | IST-REx-ID: 4190
Kai, M., Heisenberg, C.-P. J., & Tada, M. (2008). Sphingosine-1-phosphate receptors regulate individual cell behaviours underlying the directed migration of prechordal plate progenitor cells during zebrafish gastrulation. Development. Company of Biologists. https://doi.org/10.1242/dev.020396
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2008 | Conference Paper | IST-REx-ID: 4384 |
Guerraoui, R., Henzinger, T. A., Jobstmann, B., & Singh, V. (2008). Model checking transactional memories (pp. 372–382). Presented at the PLDI: Programming Languages Design and Implementation, ACM. https://doi.org/10.1145/1375581.1375626
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2008 | Conference Paper | IST-REx-ID: 4386
Guerraoui, R., Henzinger, T. A., & Singh, V. (2008). Permissiveness in transactional memories (Vol. 5218, pp. 305–319). Presented at the DISC: Distributed Computing, Springer. https://doi.org/10.1007/978-3-540-87779-0_21
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