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9084 Publications
2010 | Journal Article | IST-REx-ID: 3073
Plasma membrane-bound AGC3 kinases phosphorylate PIN auxin carriers at TPRXS(N/S) motifs to direct apical PIN recycling
P. Dhonukshe, F. Huang, C. Galván Ampudia, A. Mähönen, J. Kleine Vehn, J. Xu, A. Quint, K. Prasad, J. Friml, B. Scheres, R. Offringa, Development 137 (2010) 3245–3255.
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P. Dhonukshe, F. Huang, C. Galván Ampudia, A. Mähönen, J. Kleine Vehn, J. Xu, A. Quint, K. Prasad, J. Friml, B. Scheres, R. Offringa, Development 137 (2010) 3245–3255.
2010 | Journal Article | IST-REx-ID: 3072 | 
The march of the PINs: Developmental plasticity by dynamic polar targeting in plant cells
W. Grunewald, J. Friml, EMBO Journal 29 (2010) 2700–2714.
[Published Version]
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W. Grunewald, J. Friml, EMBO Journal 29 (2010) 2700–2714.
2010 | Journal Article | IST-REx-ID: 3079
Emergence of tissue polarization from synergy of intracellular and extracellular auxin signaling
K.T. Wabnik, J. Kleine Vehn, J. Balla, M. Sauer, S. Naramoto, V. Reinöhl, R. Merks, W. Govaerts, J. Friml, Molecular Systems Biology 6 (2010).
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| DOI
K.T. Wabnik, J. Kleine Vehn, J. Balla, M. Sauer, S. Naramoto, V. Reinöhl, R. Merks, W. Govaerts, J. Friml, Molecular Systems Biology 6 (2010).
2010 | Journal Article | IST-REx-ID: 3075
ABP1 mediates auxin inhibition of clathrin-dependent endocytosis in Arabidopsis
S. Robert, J. Kleine Vehn, E. Barbez, M. Sauer, T. Paciorek, P. Baster, S. Vanneste, J. Zhang, S. Simon, M. Čovanová, K. Hayashi, P. Dhonukshe, Z. Yang, S. Bednarek, A. Jones, C. Luschnig, F. Aniento, E. Zažímalová, J. Friml, Cell 143 (2010) 111–121.
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| DOI
S. Robert, J. Kleine Vehn, E. Barbez, M. Sauer, T. Paciorek, P. Baster, S. Vanneste, J. Zhang, S. Simon, M. Čovanová, K. Hayashi, P. Dhonukshe, Z. Yang, S. Bednarek, A. Jones, C. Luschnig, F. Aniento, E. Zažímalová, J. Friml, Cell 143 (2010) 111–121.
2010 | Book Chapter | IST-REx-ID: 3078
Immunolocalization of proteins in plants
M. Sauer, J. Friml, in:, L. Hennig, C. Köhler (Eds.), Plant Developmental Biology, Humana Press, 2010, pp. 253–263.
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M. Sauer, J. Friml, in:, L. Hennig, C. Köhler (Eds.), Plant Developmental Biology, Humana Press, 2010, pp. 253–263.
2010 | Journal Article | IST-REx-ID: 3071
The AP 3 β adaptin mediates the biogenesis and function of lytic vacuoles in Arabidopsis
E. Feraru, T. Paciorek, M. Feraru, M. Zwiewka, R. De Groodt, R. De Rycke, J. Kleine Vehn, J. Friml, Plant Cell 22 (2010) 2812–2824.
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| DOI
E. Feraru, T. Paciorek, M. Feraru, M. Zwiewka, R. De Groodt, R. De Rycke, J. Kleine Vehn, J. Friml, Plant Cell 22 (2010) 2812–2824.
2010 | Journal Article | IST-REx-ID: 3074
Arabidopsis ROOT UVB SENSITIVE2 WEAK AUXIN RESPONSE1 is required for polar auxin transport
L. Ge, W. Peer, S. Robert, R. Swarup, S. Ye, M. Prigge, J. Cohen, J. Friml, A. Murphy, D. Tang, M. Estelle, Plant Cell 22 (2010) 1749–1761.
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| DOI
L. Ge, W. Peer, S. Robert, R. Swarup, S. Ye, M. Prigge, J. Cohen, J. Friml, A. Murphy, D. Tang, M. Estelle, Plant Cell 22 (2010) 1749–1761.
2010 | Journal Article | IST-REx-ID: 3076
Cell surface- and Rho GTPase-based auxin signaling controls cellular interdigitation in Arabidopsis
T. Xu, M. Wen, S. Nagawa, Y. Fu, J. Chen, M. Wu, C. Perrot Rechenmann, J. Friml, A. Jones, Z. Yang, Cell 143 (2010) 99–110.
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T. Xu, M. Wen, S. Nagawa, Y. Fu, J. Chen, M. Wu, C. Perrot Rechenmann, J. Friml, A. Jones, Z. Yang, Cell 143 (2010) 99–110.
2010 | Journal Article | IST-REx-ID: 3077 |
Endoplasmic reticulum: The rising compartment in auxin biology
J. Friml, A. Jones, Plant Physiology 154 (2010) 458–462.
[Published Version]
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J. Friml, A. Jones, Plant Physiology 154 (2010) 458–462.
2010 | Journal Article | IST-REx-ID: 3146
Genetic mosaic dissection of Lis1 and Ndel1 in neuronal migration
S. Hippenmeyer, Y. Youn, H. Moon, K. Miyamichi, H. Zong, A. Wynshaw Boris, L. Luo, Neuron 68 (2010) 695–709.
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| DOI
S. Hippenmeyer, Y. Youn, H. Moon, K. Miyamichi, H. Zong, A. Wynshaw Boris, L. Luo, Neuron 68 (2010) 695–709.
2010 | Journal Article | IST-REx-ID: 3202
A faster algorithm for computing the principal sequence of partitions of a graph
V. Kolmogorov, Algorithmica 56 (2010) 394–412.
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| DOI
V. Kolmogorov, Algorithmica 56 (2010) 394–412.
2010 | Conference Paper | IST-REx-ID: 10909
Hardness results for homology localization
C. Chen, D. Freedman, in:, Proceedings of the 2010 Annual ACM-SIAM Symposium on Discrete Algorithms, Society for Industrial and Applied Mathematics, 2010, pp. 1594–1604.
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C. Chen, D. Freedman, in:, Proceedings of the 2010 Annual ACM-SIAM Symposium on Discrete Algorithms, Society for Industrial and Applied Mathematics, 2010, pp. 1594–1604.
2010 | Journal Article | IST-REx-ID: 3303 |
The rate of fitness-valley crossing in sexual populations
D. Weissman, M. Feldman, D. Fisher, Genetics 186 (2010) 1389–1410.
[Submitted Version]
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D. Weissman, M. Feldman, D. Fisher, Genetics 186 (2010) 1389–1410.
2010 | Journal Article | IST-REx-ID: 3407
A light-gated, potassium-selective glutamate receptor for the optical inhibition of neuronal firing
H.L. Janovjak, S. Szobota, C. Wyart, D. Trauner, E. Isacoff, Nature Neuroscience 13 (2010) 1027–1032.
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| DOI
H.L. Janovjak, S. Szobota, C. Wyart, D. Trauner, E. Isacoff, Nature Neuroscience 13 (2010) 1027–1032.
2010 | Book Review | IST-REx-ID: 3406
Pharmacology of ionotropic glutamate receptors: a structural perspective
P. Stawski, H.L. Janovjak, D. Trauner, Bioorganic and Medicinal Chemistry 18 (2010) 7759–7772.
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| DOI
P. Stawski, H.L. Janovjak, D. Trauner, Bioorganic and Medicinal Chemistry 18 (2010) 7759–7772.
2010 | Journal Article | IST-REx-ID: 3441
The reorganization and reactivation of hippocampal maps predict spatial memory performance
D. Dupret, J. O’Neill, B. Pleydell Bouverie, J.L. Csicsvari, Nature Neuroscience 13 (2010) 995–1002.
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D. Dupret, J. O’Neill, B. Pleydell Bouverie, J.L. Csicsvari, Nature Neuroscience 13 (2010) 995–1002.
2010 | Journal Article | IST-REx-ID: 3442
Play it again: reactivation of waking experience and memory
J. O’Neill, B. Pleydell Bouverie, D. Dupret, J.L. Csicsvari, Trends in Neurosciences 33 (2010) 220–229.
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| DOI
J. O’Neill, B. Pleydell Bouverie, D. Dupret, J.L. Csicsvari, Trends in Neurosciences 33 (2010) 220–229.
2010 | Book Chapter | IST-REx-ID: 3459
Grundlagen zellulärer Erregbarkeit
B. Fakler, P.M. Jonas, in:, R. Schmidt, M. Heckmann, F. Lang (Eds.), Physiologie Des Menschen, Springer, 2010.
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B. Fakler, P.M. Jonas, in:, R. Schmidt, M. Heckmann, F. Lang (Eds.), Physiologie Des Menschen, Springer, 2010.
2010 | Journal Article | IST-REx-ID: 3538 |
High-frequency network activity, global increase in neuronal activity, and synchrony expansion precede epileptic seizures in vitro
P. Jiruska, J.L. Csicsvari, A. Powell, J. Fox, W. Chang, M. Vreugdenhil, X. Li, M. Palus, A. Bujan, R. Dearden, J. Jefferys, Journal of Neuroscience 30 (2010) 5690–5701.
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P. Jiruska, J.L. Csicsvari, A. Powell, J. Fox, W. Chang, M. Vreugdenhil, X. Li, M. Palus, A. Bujan, R. Dearden, J. Jefferys, Journal of Neuroscience 30 (2010) 5690–5701.
2010 | Journal Article | IST-REx-ID: 3604
Investigating temporal changes in hybridisation and introgression between invasive sika (Cervus nippon) and native red deer (Cervus elaphus) on the Kintyre Peninsula, Scotland
H. Senn, S. Goodman, G. Swanson, N.H. Barton, J. Pemberton, Molecular Ecology 19 (2010) 910–924.
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H. Senn, S. Goodman, G. Swanson, N.H. Barton, J. Pemberton, Molecular Ecology 19 (2010) 910–924.
2010 | Journal Article | IST-REx-ID: 3603
A new model for large-scale population dynamics: quantifying phylogeography
N.H. Barton, J. Kelleher, A. Etheridge, Evolution; International Journal of Organic Evolution 64 (2010) 2701–2715.
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| DOI
N.H. Barton, J. Kelleher, A. Etheridge, Evolution; International Journal of Organic Evolution 64 (2010) 2701–2715.
2010 | Journal Article | IST-REx-ID: 3686
Global interactions in random field models: A potential function ensuring connectedness
S. Nowozin, C. Lampert, SIAM Journal on Imaging Sciences 3 (2010) 1048–1074.
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S. Nowozin, C. Lampert, SIAM Journal on Imaging Sciences 3 (2010) 1048–1074.
2010 | Conference Paper | IST-REx-ID: 3682
Optimizing one-shot recognition with micro-set learning
K. Tang, M. Tappen, R. Sukthankar, C. Lampert, in:, IEEE, 2010, pp. 3027–3034.
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K. Tang, M. Tappen, R. Sukthankar, C. Lampert, in:, IEEE, 2010, pp. 3027–3034.
2010 | Conference Paper | IST-REx-ID: 3702
Movement templates for learning of hitting and batting
J. Kober, K. Mülling, O. Krömer, C. Lampert, B. Schölkopf, J. Peters, in:, IEEE, 2010, pp. 853–858.
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J. Kober, K. Mülling, O. Krömer, C. Lampert, B. Schölkopf, J. Peters, in:, IEEE, 2010, pp. 853–858.
2010 | Conference Paper | IST-REx-ID: 3719 |
Lumpability abstractions of rule-based systems
J. Feret, T.A. Henzinger, H. Koeppl, T. Petrov, in:, Open Publishing Association, 2010, pp. 142–161.
[Submitted Version]
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J. Feret, T.A. Henzinger, H. Koeppl, T. Petrov, in:, Open Publishing Association, 2010, pp. 142–161.
2010 | Journal Article | IST-REx-ID: 3718
P2Y1 receptors inhibit long-term depression in the prefrontal cortex.
J. Guzmán, H. Schmidt, H. Franke, U. Krügel, J. Eilers, P. Illes, Z. Gerevich, Neuropharmacology 59 (2010) 406–415.
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| DOI
J. Guzmán, H. Schmidt, H. Franke, U. Krügel, J. Eilers, P. Illes, Z. Gerevich, Neuropharmacology 59 (2010) 406–415.
2010 | Journal Article | IST-REx-ID: 3735
Local statistics in natural scenes predict the saliency of synthetic textures
G. Tkačik, J. Prentice, J. Victor, V. Balasubramanian, PNAS 107 (2010) 18149–18154.
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G. Tkačik, J. Prentice, J. Victor, V. Balasubramanian, PNAS 107 (2010) 18149–18154.
2010 | Journal Article | IST-REx-ID: 3736
Optimal population coding by noisy spiking neurons
G. Tkačik, J. Prentice, V. Balasubramanian, E. Schneidman, PNAS 107 (2010) 14419–14424.
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G. Tkačik, J. Prentice, V. Balasubramanian, E. Schneidman, PNAS 107 (2010) 14419–14424.
2010 | Journal Article | IST-REx-ID: 3738
Optimizing information flow in small genetic networks. II. Feed-forward interactions
A. Walczak, G. Tkačik, W. Bialek, Physical Review E Statistical Nonlinear and Soft Matter Physics 81 (2010).
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A. Walczak, G. Tkačik, W. Bialek, Physical Review E Statistical Nonlinear and Soft Matter Physics 81 (2010).
2010 | Journal Article | IST-REx-ID: 3748 |
Interdependence of behavioural variability and response to small stimuli in bacteria
H. Park, W. Pontius, C.C. Guet, J. Marko, T. Emonet, P. Cluzel, Nature 468 (2010) 819–823.
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H. Park, W. Pontius, C.C. Guet, J. Marko, T. Emonet, P. Cluzel, Nature 468 (2010) 819–823.
2010 | Journal Article | IST-REx-ID: 3749 |
Fine-tuning of chemotactic response in E. coli determined by high-throughput capillary assay
H. Park, C.C. Guet, T. Emonet, P. Cluzel, Current Microbiology 62 (2010) 764–769.
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H. Park, C.C. Guet, T. Emonet, P. Cluzel, Current Microbiology 62 (2010) 764–769.
2010 | Journal Article | IST-REx-ID: 3766
A multiscale approach to mesh-based surface tension flows
N. Thürey, C. Wojtan, M. Gross, G. Turk, ACM Transactions on Graphics 29 (2010).
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N. Thürey, C. Wojtan, M. Gross, G. Turk, ACM Transactions on Graphics 29 (2010).
2010 | Journal Article | IST-REx-ID: 3783
Microsatelight – Pipeline to expedite microsatellite analysis
F. Palero, F. González Candelas, M. Pascual, Journal of Heredity 102 (2010) 247–249.
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| DOI
F. Palero, F. González Candelas, M. Pascual, Journal of Heredity 102 (2010) 247–249.
2010 | Conference Paper | IST-REx-ID: 3782
Topology noise removal for curve and surface evolution
C. Chen, D. Freedman, in:, Conference Proceedings MCV 2010, Springer, 2010, pp. 31–42.
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C. Chen, D. Freedman, in:, Conference Proceedings MCV 2010, Springer, 2010, pp. 31–42.
2010 | Book Chapter | IST-REx-ID: 3795 |
The stability of the apparent contour of an orientable 2-manifold
H. Edelsbrunner, D. Morozov, A. Patel, in:, Topological Data Analysis and Visualization: Theory, Algorithms and Applications, Springer, 2010, pp. 27–42.
[Submitted Version]
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H. Edelsbrunner, D. Morozov, A. Patel, in:, Topological Data Analysis and Visualization: Theory, Algorithms and Applications, Springer, 2010, pp. 27–42.
2010 | Conference Paper | IST-REx-ID: 3794
Weakly-paired maximum covariance analysis for multimodal dimensionality reduction and transfer learning
C. Lampert, O. Krömer, in:, Springer, 2010, pp. 566–579.
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C. Lampert, O. Krömer, in:, Springer, 2010, pp. 566–579.
2010 | Journal Article | IST-REx-ID: 3831 |
Distinct nonuniform cable properties optimize rapid and efficient activation of fast-spiking GABAergic interneurons
A. Norenberg, H. Hu, I. Vida, M. Bartos, P.M. Jonas, PNAS 107 (2010) 894–9.
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A. Norenberg, H. Hu, I. Vida, M. Bartos, P.M. Jonas, PNAS 107 (2010) 894–9.
2010 | Journal Article | IST-REx-ID: 3832 |
Beyond TARPs: The growing list of auxiliary AMPAR subunits
J. Guzmán, P.M. Jonas, Neuron 66 (2010) 8–10.
[Published Version]
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J. Guzmán, P.M. Jonas, Neuron 66 (2010) 8–10.
2010 | Journal Article | IST-REx-ID: 3830
Dendritic mechanisms underlying rapid synaptic activation of fast-spiking hippocampal interneurons
H. Hu, M. Martina, P.M. Jonas, Science 327 (2010) 52–8.
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| DOI
H. Hu, M. Martina, P.M. Jonas, Science 327 (2010) 52–8.
2010 | Journal Article | IST-REx-ID: 3833
GABA release at terminals of CCK-interneurons: synchrony, asynchrony and modulation by cannabinoid receptors (commentary on Ali & Todorova)
P.M. Jonas, S. Hefft, The European Journal of Neuroscience 31 (2010) 1194–1195.
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P.M. Jonas, S. Hefft, The European Journal of Neuroscience 31 (2010) 1194–1195.
2010 | Journal Article | IST-REx-ID: 3829
A small number of open Ca(2+) channels trigger transmitter release at a central GABAergic synapse
I. Bucurenciu, J. Bischofberger, P.M. Jonas, Nature Neuroscience 13 (2010) 19–21.
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| DOI
I. Bucurenciu, J. Bischofberger, P.M. Jonas, Nature Neuroscience 13 (2010) 19–21.
2010 | Conference Paper | IST-REx-ID: 3847 |
SABRE: A tool for the stochastic analysis of biochemical reaction networks
F. Didier, T.A. Henzinger, M. Mateescu, V. Wolf, in:, IEEE, 2010, pp. 193–194.
[Submitted Version]
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F. Didier, T.A. Henzinger, M. Mateescu, V. Wolf, in:, IEEE, 2010, pp. 193–194.
2010 | Conference Paper | IST-REx-ID: 3845 |
Aligators for arrays
T.A. Henzinger, T. Hottelier, L. Kovács, A. Rybalchenko, in:, Springer, 2010, pp. 348–356.
[Submitted Version]
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T.A. Henzinger, T. Hottelier, L. Kovács, A. Rybalchenko, in:, Springer, 2010, pp. 348–356.
2010 | Journal Article | IST-REx-ID: 3842 |
Fast adaptive uniformization of the chemical master equation
F. Didier, T.A. Henzinger, M. Mateescu, V. Wolf, IET Systems Biology 4 (2010) 441–452.
[Submitted Version]
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F. Didier, T.A. Henzinger, M. Mateescu, V. Wolf, IET Systems Biology 4 (2010) 441–452.
2010 | Conference Paper | IST-REx-ID: 3848
The robustness of level sets
P. Bendich, H. Edelsbrunner, D. Morozov, A. Patel, in:, Springer, 2010, pp. 1–10.
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| DOI
P. Bendich, H. Edelsbrunner, D. Morozov, A. Patel, in:, Springer, 2010, pp. 1–10.
2010 | Conference Paper | IST-REx-ID: 3858 |
The complexity of partial-observation parity games
K. Chatterjee, L. Doyen, in:, Springer, 2010, pp. 1–14.
[Submitted Version]
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K. Chatterjee, L. Doyen, in:, Springer, 2010, pp. 1–14.
2010 | Conference Paper | IST-REx-ID: 3856 |
Randomness for free
K. Chatterjee, L. Doyen, H. Gimbert, T.A. Henzinger, in:, Springer, 2010, pp. 246–257.
[Preprint]
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K. Chatterjee, L. Doyen, H. Gimbert, T.A. Henzinger, in:, Springer, 2010, pp. 246–257.
2010 | Conference (Editor) | IST-REx-ID: 3859
Formal modeling and analysis of timed systems
K. Chatterjee, T.A. Henzinger, eds., Formal Modeling and Analysis of Timed Systems, Springer, 2010.
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K. Chatterjee, T.A. Henzinger, eds., Formal Modeling and Analysis of Timed Systems, Springer, 2010.
2010 | Conference Paper | IST-REx-ID: 3866 |
Robustness in the presence of liveness
R. Bloem, K. Chatterjee, K. Greimel, T.A. Henzinger, B. Jobstmann, in:, T. Touili, B. Cook, P. Jackson (Eds.), Springer, 2010, pp. 410–424.
[Submitted Version]
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R. Bloem, K. Chatterjee, K. Greimel, T.A. Henzinger, B. Jobstmann, in:, T. Touili, B. Cook, P. Jackson (Eds.), Springer, 2010, pp. 410–424.
2010 | Journal Article | IST-REx-ID: 3868 |
Algorithms for game metrics
K. Chatterjee, L. De Alfaro, R. Majumdar, V. Raman, Logical Methods in Computer Science 6 (2010) 1–27.
[Published Version]
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K. Chatterjee, L. De Alfaro, R. Majumdar, V. Raman, Logical Methods in Computer Science 6 (2010) 1–27.