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8989 Publications


2011 | Journal Article | IST-REx-ID: 3147
Liu, Chong, et al. “Mosaic Analysis with Double Markers Reveals Tumor Cell of Origin in Glioma.” Cell, vol. 146, no. 2, Cell Press, 2011, pp. 209–21, doi:10.1016/j.cell.2011.06.014.
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2011 | Conference Paper | IST-REx-ID: 3204
Kolmogorov, Vladimir. Submodularity on a Tree: Unifying Submodularity on a Tree: Unifying L-Convex and Bisubmodular Functions Convex and Bisubmodular Functions. Vol. 6907, Springer, 2011, pp. 400–11, doi:10.1007/978-3-642-22993-0_37.
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2011 | Conference Paper | IST-REx-ID: 3206
Osokin, Anton, et al. Submodular Decomposition Framework for Inference in Associative Markov Networks with Global Constraints. IEEE, 2011, pp. 1889–96, doi:10.1109/CVPR.2011.5995361.
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2011 | Conference Paper | IST-REx-ID: 3205
Tarlow, Daniel, et al. Dynamic Tree Block Coordinate Ascent. Omnipress, 2011, pp. 113–20.
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2011 | Conference Paper | IST-REx-ID: 3207
Vicente, Sara, et al. Object Cosegmentation. IEEE, 2011, pp. 2217–24, doi:10.1109/CVPR.2011.5995530.
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2011 | Conference Paper | IST-REx-ID: 3240
Barak, Boaz, et al. Leftover Hash Lemma Revisited. Vol. 6841, Springer, 2011, pp. 1–20, doi: 10.1007/978-3-642-22792-9_1.
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2011 | Conference Paper | IST-REx-ID: 3264
Gupta, Ashutosh, et al. Solving Recursion-Free Horn Clauses over LI+UIF. Edited by Hongseok Yang, vol. 7078, Springer, 2011, pp. 188–203, doi:10.1007/978-3-642-25318-8_16.
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2011 | Conference Paper | IST-REx-ID: 3266
Ion, Adrian, et al. “Probabilistic Joint Image Segmentation and Labeling.” NIPS Proceedings, vol. 24, Neural Information Processing Systems Foundation, 2011, pp. 1827–35.
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2011 | Journal Article | IST-REx-ID: 3269 | OA
Sheng, Yu, et al. “Perceptual Global Illumination Cancellation in Complex Projection Environments.” Computer Graphics Forum, vol. 30, no. 4, Wiley-Blackwell, 2011, pp. 1261–68, doi:10.1111/j.1467-8659.2011.01985.x.
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2011 | Journal Article | IST-REx-ID: 3267
Chen, Chao, and Daniel Freedman. “Hardness Results for Homology Localization.” Discrete & Computational Geometry, vol. 45, no. 3, Springer, 2011, pp. 425–48, doi:10.1007/s00454-010-9322-8.
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2011 | Book Chapter | IST-REx-ID: 3268
Freedman, Daniel, and Chao Chen. “Algebraic Topology for Computer Vision.” Computer Vision, Nova Science Publishers, 2011, pp. 239–68.
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2011 | Journal Article | IST-REx-ID: 3288 | OA
Smutny, Michael, et al. “Multicomponent Analysis of Junctional Movements Regulated by Myosin II Isoforms at the Epithelial Zonula Adherens.” PLoS One, vol. 6, no. 7, Public Library of Science, 2011, doi:10.1371/journal.pone.0022458.
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2011 | Journal Article | IST-REx-ID: 3286
Weghuber, Julian, et al. “Cationic Amphipathic Peptides Accumulate Sialylated Proteins and Lipids in the Plasma Membrane of Eukaryotic Host Cells.” Biochimica et Biophysica Acta (BBA) - Biomembranes, vol. 1808, no. 10, Elsevier, 2011, pp. 2581–90, doi:10.1016/j.bbamem.2011.06.007.
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2011 | Journal Article | IST-REx-ID: 3287
Ruprecht, Verena, et al. “What Can We Learn from Single Molecule Trajectories?” Current Protein & Peptide Science, vol. 12, no. 8, Bentham Science Publishers, 2011, pp. 714–24, doi:10.2174/138920311798841753.
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2011 | Journal Article | IST-REx-ID: 3285
Ruprecht, Verena, et al. “Spot Variation Fluorescence Correlation Spectroscopy Allows for Superresolution Chronoscopy of Confinement Times in Membranes.” Biophysical Journal, vol. 100, no. 11, Biophysical Society, 2011, pp. 2839–45, doi:10.1016/j.bpj.2011.04.035.
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2011 | Conference Paper | IST-REx-ID: 3302 | OA
Henzinger, Thomas A., et al. Static Scheduling in Clouds. USENIX, 2011, pp. 1–6.
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2011 | Conference Paper | IST-REx-ID: 3301 | OA
Henzinger, Thomas A., and Maria Mateescu. Tail Approximation for the Chemical Master Equation. Tampere International Center for Signal Processing, 2011.
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2011 | Conference Paper | IST-REx-ID: 3299 | OA
Henzinger, Thomas A., and Maria Mateescu. Propagation Models for Computing Biochemical Reaction Networks. Springer, 2011, pp. 1–3, doi:10.1145/2037509.2037510.
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2011 | Conference Paper | IST-REx-ID: 3316 | OA
Bloem, Roderick, et al. “Specification-Centered Robustness.” 6th IEEE International Symposium on Industrial and Embedded Systems, IEEE, 2011, pp. 176–85, doi:10.1109/SIES.2011.5953660.
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2011 | Journal Article | IST-REx-ID: 3318 | OA
Eggermann, Emmanuel, and Peter M. Jonas. “How the ‘Slow’ Ca(2+) Buffer Parvalbumin Affects Transmitter Release in Nanodomain Coupling Regimes at GABAergic Synapses.” Nature Neuroscience, vol. 15, Nature Publishing Group, 2011, pp. 20–22, doi:10.1038/nn.3002.
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2011 | Book Chapter | IST-REx-ID: 3335 | OA
Van De Weygaert, Rien, et al. “Alpha, Betti and the Megaparsec Universe: On the Topology of the Cosmic Web.” Transactions on Computational Science XIV, edited by Marina Gavrilova et al., vol. 6970, Springer, 2011, pp. 60–101, doi:10.1007/978-3-642-25249-5_3.
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2011 | Conference Paper | IST-REx-ID: 3329 | OA
Berberich, Eric, et al. “Deconstructing Approximate Offsets.” Proceedings of the Twenty-Seventh Annual Symposium on Computational Geometry, ACM, 2011, pp. 187–96, doi:10.1145/1998196.1998225.
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2011 | Journal Article | IST-REx-ID: 3332 | OA
Kerber, Michael, and Michael Sagraloff. “A Note on the Complexity of Real Algebraic Hypersurfaces.” Graphs and Combinatorics, vol. 27, no. 3, Springer, 2011, pp. 419–30, doi:10.1007/s00373-011-1020-7.
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2011 | Conference Paper | IST-REx-ID: 3330 | OA
Kerber, Michael, and Michael Sagraloff. Root Refinement for Real Polynomials. Springer, 2011, pp. 209–16, doi:10.1145/1993886.1993920.
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2011 | Conference Paper | IST-REx-ID: 3328 | OA
Berberich, Eric, et al. A Generic Algebraic Kernel for Non Linear Geometric Applications. ACM, 2011, pp. 179–86, doi:10.1145/1998196.1998224.
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2011 | Journal Article | IST-REx-ID: 3334
Edelsbrunner, Herbert, et al. “Letter from the New Editors-in-Chief.” Discrete & Computational Geometry, vol. 45, no. 1, Springer, 2011, pp. 1–2, doi:10.1007/s00454-010-9313-9.
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2011 | Journal Article | IST-REx-ID: 3353 | OA
Tripakis, Stavros, et al. “A Theory of Synchronous Relational Interfaces.” ACM Transactions on Programming Languages and Systems (TOPLAS), vol. 33, no. 4, 14, ACM, 2011, doi:10.1145/1985342.1985345.
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2011 | Conference Paper | IST-REx-ID: 3355 | OA
Halalai, Raluca, et al. Quantitative Evaluation of BFT Protocols. IEEE, 2011, pp. 255–64, doi:10.1109/QEST.2011.40.
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2011 | Conference Paper | IST-REx-ID: 3350
Chatterjee, Krishnendu, and Ritankar Majumdar. Minimum Attention Controller Synthesis for Omega Regular Objectives. Edited by Uli Fahrenberg and Stavros Tripakis, vol. 6919, Springer, 2011, pp. 145–59, doi:10.1007/978-3-642-24310-3_11.
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2011 | Conference Paper | IST-REx-ID: 3351 | OA
Chatterjee, Krishnendu, et al. On Memoryless Quantitative Objectives. Edited by Olaf Owe et al., vol. 6914, Springer, 2011, pp. 148–59, doi:10.1007/978-3-642-22953-4_13.
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2011 | Journal Article | IST-REx-ID: 3354
Chatterjee, Krishnendu, et al. “Qualitative Concurrent Parity Games.” ACM Transactions on Computational Logic (TOCL), vol. 12, no. 4, 28, ACM, 2011, doi:10.1145/1970398.1970404.
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2011 | Conference Paper | IST-REx-ID: 3349 | OA
Chatterjee, Krishnendu, and Nathanaël Fijalkow. A Reduction from Parity Games to Simple Stochastic Games. Vol. 54, EPTCS, 2011, pp. 74–86, doi:10.4204/EPTCS.54.6.
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2011 | Journal Article | IST-REx-ID: 335
Ibáñez, Maria, et al. “Means and Limits of Control of the Shell Parameters in Hollow Nanoparticles Obtained by the Kirkendall Effect.” Chemistry of Materials, vol. 23, no. 12, American Chemical Society, 2011, pp. 3095–104, doi:10.1021/cm2006633.
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2011 | Journal Article | IST-REx-ID: 3352
Fisher, Jasmin, et al. “Biology as Reactivity.” Communications of the ACM, vol. 54, no. 10, ACM, 2011, pp. 72–82, doi:10.1145/2001269.2001289.
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2011 | Conference Paper | IST-REx-ID: 3362 | OA
Fisher, Jasmin, et al. Dynamic Reactive Modules. Vol. 6901, Schloss Dagstuhl - Leibniz-Zentrum für Informatik, 2011, pp. 404–18, doi:10.1007/978-3-642-23217-6_27.
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2011 | Conference Paper | IST-REx-ID: 3365 | OA
Chatterjee, Krishnendu, et al. QUASY: Quantitative Synthesis Tool. Vol. 6605, Springer, 2011, pp. 267–71, doi:10.1007/978-3-642-19835-9_24.
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2011 | Conference Paper | IST-REx-ID: 3367
Chen, Chao, and Michael Kerber. An Output Sensitive Algorithm for Persistent Homology. ACM, 2011, pp. 207–16, doi:10.1145/1998196.1998228.
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2011 | Preprint | IST-REx-ID: 3363 | OA
Chatterjee, Krishnendu, et al. The Decidability Frontier for Probabilistic Automata on Infinite Words. ArXiv.
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2011 | Journal Article | IST-REx-ID: 3372 | OA
Abbot P et al. 2011. Inclusive fitness theory and eusociality. Nature. 471(7339), E1–E4.
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2011 | Journal Article | IST-REx-ID: 3371 | OA
Sixt, Michael K., and Carole Parent. “Cells on the Move in Philadelphia.” Molecular Biology and Evolution, vol. 22, no. 6, Oxford University Press, 2011, p. 724, doi:10.1091/mbc.E10-12-0958.
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2011 | Journal Article | IST-REx-ID: 3374 | OA
Tkačik, Gašper, and Aleksandra Walczak. “Information Transmission in Genetic Regulatory Networks a Review.” Journal of Physics: Condensed Matter, vol. 23, no. 15, 153102, IOP Publishing Ltd., 2011, doi:10.1088/0953-8984/23/15/153102.
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2011 | Journal Article | IST-REx-ID: 3368 | OA
Krens, Gabriel, et al. “Enveloping Cell Layer Differentiation at the Surface of Zebrafish Germ Layer Tissue Explants.” PNAS, vol. 108, no. 3, National Academy of Sciences, 2011, pp. E9–10, doi:10.1073/pnas.1010767108.
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2011 | Journal Article | IST-REx-ID: 3370 | OA
Kupczok, Anne. “Consequences of Different Null Models on the Tree Shape Bias of Supertree Methods.” Systematic Biology, vol. 60, no. 2, Oxford University Press, 2011, pp. 218–25, doi:10.1093/sysbio/syq086.
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2011 | Journal Article | IST-REx-ID: 3369
Pernia-Andrade, Alejandro, and Peter M. Jonas. “The Multiple Faces of RIM.” Neuron, vol. 69, no. 2, Elsevier, 2011, pp. 185–87, doi:10.1016/j.neuron.2011.01.010.
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2011 | Journal Article | IST-REx-ID: 3396 | OA
Stockinger, Petra, et al. “Defective Neuroepithelial Cell Cohesion Affects Tangential Branchiomotor Neuron Migration in the Zebrafish Neural Tube.” Development, vol. 138, no. 21, Company of Biologists, 2011, pp. 4673–83, doi:10.1242/dev.071233.
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2011 | Journal Article | IST-REx-ID: 3394 | OA
Polechova, Jitka, and Nicholas H. Barton. “Genetic Drift Widens the Expected Cline but Narrows the Expected Cline Width.” Genetics, vol. 189, no. 1, Genetics Society of America, 2011, pp. 227–35, doi:10.1534/genetics.111.129817.
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2011 | Journal Article | IST-REx-ID: 3390 | OA
Barton, Nicholas H., and Alison Etheridge. “The Relation between Reproductive Value and Genetic Contribution.” Genetics, vol. 188, no. 4, Genetics Society of America, 2011, pp. 953–73, doi:10.1534/genetics.111.127555.
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2011 | Journal Article | IST-REx-ID: 3391 | OA
de Vladar, Harold, and Nicholas H. Barton. “The Contribution of Statistical Physics to Evolutionary Biology.” Trends in Ecology and Evolution, vol. 26, no. 8, Cell Press, 2011, pp. 424–32, doi:10.1016/j.tree.2011.04.002.
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2011 | Journal Article | IST-REx-ID: 3397 | OA
Maître, Jean-Léon, and Carl-Philipp J. Heisenberg. “The Role of Adhesion Energy in Controlling Cell-Cell Contacts.” Current Opinion in Cell Biology, vol. 23, no. 5, Elsevier, 2011, pp. 508–14, doi:10.1016/j.ceb.2011.07.004.
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2011 | Journal Article | IST-REx-ID: 3405 | OA
Janovjak, Harald L., et al. “Modern Ionotropic Glutamate Receptor with a K+ Selectivity Signature Sequence.” Nature Communications, vol. 2, no. 232, Nature Publishing Group, 2011, pp. 1–6, doi:10.1038/ncomms1231.
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