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7223 Publications


2004 | Book Chapter | IST-REx-ID: 3574
H. Edelsbrunner, “Biological applications of computational topology,” in Handbook of Discrete and Computational Geometry, CRC Press, 2004, pp. 1395–1412.
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2004 | Book Chapter | IST-REx-ID: 3575
H. Edelsbrunner and J. Harer, “Jacobi sets of multiple Morse functions,” in Foundations of Computational Mathematics, vol. 312, Springer, 2004, pp. 37–57.
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2004 | Book Chapter | IST-REx-ID: 3587
F. Ulrich and C.-P. J. Heisenberg, “Gastrulation in zebrafish,” in Fish development and genetics : the zebrafish and medaka models, vol. 2, V. Korzh and Z. Gong, Eds. World Scientific Publishing, 2004, pp. 39–86.
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2004 | Book Review | IST-REx-ID: 3595
B. Charlesworth and N. H. Barton, “Genome size: Does bigger mean worse?,” Current Biology, vol. 14, no. 6. Cell Press, pp. R233–R235, 2004.
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2004 | Journal Article | IST-REx-ID: 3614
N. H. Barton and M. Turelli, “Effects of allele frequency changes on variance components under a general model of epistasis,” Evolution; International Journal of Organic Evolution, vol. 58, no. 10. Wiley-Blackwell, pp. 2111–2132, 2004.
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2004 | Journal Article | IST-REx-ID: 3615
M. Turelli and N. H. Barton, “Polygenic variation maintained by balancing selection: pleiotropy, sex-dependent allelic effects and GxE interactions,” Genetics, vol. 166, no. 2. Genetics Society of America, pp. 1053–1079, 2004.
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2004 | Book Review | IST-REx-ID: 3616
N. H. Barton, “Speciation: Why, how, where and when?,” Current Biology, vol. 14, no. 15. Cell Press, pp. R603–R604, 2004.
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2004 | Journal Article | IST-REx-ID: 3617
N. H. Barton and A. Etheridge, “The effect of selection on genealogies,” Genetics, vol. 166, no. 2. Genetics Society of America, pp. 1115–1131, 2004.
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2004 | Conference Paper | IST-REx-ID: 3688
A. Ulges, C. Lampert, and T. Breuel, “Document capture using stereo vision,” presented at the DocEng: ACM Symposium on Document Engineering, 2004, pp. 198–200.
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2004 | Journal Article | IST-REx-ID: 3805
P. M. Jonas, J. Bischofberger, D. Fricker, and R. Miles, “Interneuron Diversity series: Fast in, fast out--temporal and spatial signal processing in hippocampal interneurons,” Trends in Neurosciences, vol. 27, no. 1. Elsevier, pp. 30–40, 2004.
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2004 | Journal Article | IST-REx-ID: 3807 | OA
B. Kampa, J. Clements, P. M. Jonas, and G. Stuart, “Kinetics of Mg(2+) unblock of NMDA receptors: implications for spike-timing dependent synaptic plasticity,” Journal of Physiology, vol. 556, no. Pt 2. Wiley-Blackwell, pp. 337–45, 2004.
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2004 | Journal Article | IST-REx-ID: 3809
C. Schmidt Hieber, P. M. Jonas, and J. Bischofberger, “Enhanced synaptic plasticity in newly generated granule cells of the adult hippocampus,” Nature, vol. 429, no. 6988. Nature Publishing Group, pp. 184–7, 2004.
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2004 | Journal Article | IST-REx-ID: 3810
D. Oliver, C. Lien, M. Soom, T. Baukrowitz, P. M. Jonas, and B. Fakler, “Functional conversion between A-type and delayed rectifier K+ channels by membrane lipids,” Science, vol. 304, no. 5668. American Association for the Advancement of Science, pp. 265–70, 2004.
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2004 | Conference Paper | IST-REx-ID: 3894
K. Chatterjee, R. Majumdar, and M. Jurdziński, “On Nash equilibria in stochastic games,” presented at the CSL: Computer Science Logic, 2004, vol. 3210, pp. 26–40.
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2004 | Conference Paper | IST-REx-ID: 3895
K. Chatterjee, T. A. Henzinger, and M. Jurdziński, “Games with secure equilibria,” presented at the LICS: Logic in Computer Science, 2004, pp. 160–169.
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2004 | Journal Article | IST-REx-ID: 3918
J. Heinze, A. Böttcher, and S. Cremer, “Production of winged and wingless males in the ant, Cardiocondyla minutior,” Insectes Sociaux, vol. 51, no. 3. Springer, pp. 275–278, 2004.
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2004 | Journal Article | IST-REx-ID: 3929
V. Witte et al., “HIV-1 Nef mimics an integrin receptor signal that recruits the polycomb group protein Eed to the plasma membrane,” Molecular Cell, vol. 13, no. 2. Cell Press, pp. 179–190, 2004.
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2004 | Journal Article | IST-REx-ID: 3931
H. Zhang, S. Baader, M. K. Sixt, J. Kappler, and U. Rauch, “Neurocan-GFP fusion protein: a new approach to detect hyaluronan on tissue sections and living cells,” Journal of Histochemistry and Cytochemistry, vol. 52, no. 7. Histochemical Society, pp. 915–922, 2004.
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2004 | Journal Article | IST-REx-ID: 3984
P. Bremer, H. Edelsbrunner, B. Hamann, and V. Pascucci, “A topological hierarchy for functions on triangulated surfaces,” IEEE Transactions on Visualization and Computer Graphics, vol. 10, no. 4. IEEE, pp. 385–396, 2004.
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2004 | Journal Article | IST-REx-ID: 3985
K. Cole Mclaughlin, H. Edelsbrunner, J. Harer, V. Natarajan, and V. Pascucci, “Loops in Reeb graphs of 2-manifolds,” Discrete & Computational Geometry, vol. 32, no. 2. Springer, pp. 231–244, 2004.
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2004 | Journal Article | IST-REx-ID: 3986
R. Bryant, H. Edelsbrunner, P. Koehl, and M. Levitt, “The area derivative of a space-filling diagram,” Discrete & Computational Geometry, vol. 32, no. 3. Springer, pp. 293–308, 2004.
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2004 | Journal Article | IST-REx-ID: 3987
V. Natarajan and H. Edelsbrunner, “Simplification of three-dimensional density maps,” IEEE Transactions on Visualization and Computer Graphics, vol. 10, no. 5. IEEE, pp. 587–597, 2004.
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2004 | Conference Paper | IST-REx-ID: 3988
V. Choi, P. Agarwal, H. Edelsbrunner, and J. Rudolph, “Local search heuristic for rigid protein docking,” presented at the WABI: 4th International Workshop on Algorithms in Bioinformatics, 2004, vol. 3240, pp. 218–229.
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2004 | Conference Paper | IST-REx-ID: 3989
H. Edelsbrunner, J. Harer, V. Natarajan, and V. Pascucci, “Local and global comparison of continuous functions,” presented at the VIS: IEEE Visualization, 2004, pp. 275–280.
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2004 | Journal Article | IST-REx-ID: 3990
P. Agarwal, H. Edelsbrunner, and Y. Wang, “Computing the writhing number of a polygonal knot,” Discrete & Computational Geometry, vol. 32, no. 1. Springer, pp. 37–53, 2004.
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2004 | Journal Article | IST-REx-ID: 4172
J. Montero and C.-P. J. Heisenberg, “Gastrulation dynamics: cells move into focus,” Trends in Cell Biology, vol. 14, no. 11. Cell Press, pp. 620–627, 2004.
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2004 | Journal Article | IST-REx-ID: 4224
K. Kruse, P. Pantazis, M. T. Bollenbach, F. Julicher, and M. Gonzalez Gaitan, “Dpp gradient formation by dynamin-dependent endocytosis: receptor trafficking and the diffusion model,” Development, vol. 131, no. 19. Company of Biologists, pp. 4843–4856, 2004.
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2004 | Book Chapter | IST-REx-ID: 4230
H. de Vladar, R. Cipriani, B. Scharifker, and J. Bubis, “A mechanism for the prebiotic emergence of proteins,” in Life in the Universe From the Miller Experiment to the Search for Life on Other Worlds, A. Hanslmeier, S. Kempe, and J. Seckbach, Eds. Springer, 2004, pp. 83–87.
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2004 | Thesis | IST-REx-ID: 4236
H. de Vladar, “Métodos no lineales y sus aplicaciones en dinámicas aleatorias de poblaciones celulares,” Centro de estudios avazados, IVIC, 2004.
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2004 | Journal Article | IST-REx-ID: 4238
H. de Vladar and J. González, “Dynamic response of cancer under the influence of immunological activity and therapy,” Journal of Theoretical Biology, vol. 227, no. 3. Elsevier, pp. 335–348, 2004.
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2004 | Book Chapter | IST-REx-ID: 4239
H. de Vladar, R. Cipriani, B. Scharifker, and J. Bubis, “A Mechanism for the Prebiotic Emergence of Proteins,” in Life in the Universe From the Miller Experiment to the Search for Life on Other Worlds, vol. 7, J. Seckbach, J. Chela Flores, T. Owen, and F. Raulin, Eds. Springer, 2004, pp. 83–87.
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2004 | Journal Article | IST-REx-ID: 4253
N. H. Barton, A. Etheridge, and A. Sturm, “Coalescence in a Random Background,” Annals of Applied Probability, vol. 14, no. 2. Institute of Mathematical Statistics, pp. 754–785, 2004.
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2004 | Conference Paper | IST-REx-ID: 4372
O. Maler and D. Nickovic, “Monitoring Temporal Properties of Continuous Signals,” presented at the FORMATS: Formal Modeling and Analysis of Timed Systems, 2004, pp. 152–166.
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2003 | Journal Article | IST-REx-ID: 2990
J. Friml, “Auxin transport - Shaping the plant,” Current Opinion in Plant Biology, vol. 6, no. 1. Elsevier, pp. 7–12, 2003.
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2003 | Journal Article | IST-REx-ID: 2992
V. Willemsen, J. Friml, M. Grebe, A. Van Den Toorn, K. Palme, and B. Scheres, “Cell polarity and PIN protein positioning in Arabidopsis require STEROL METHYLTRANSFERASE1 function,” Plant Cell, vol. 15, no. 3. American Society of Plant Biologists, pp. 612–625, 2003.
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2003 | Journal Article | IST-REx-ID: 2993
J. Friml, E. Benková, U. Mayer, K. Palme, and G. Muster, “Automated whole mount localisation techniques for plant seedlings,” Plant Journal, vol. 34, no. 1. Wiley-Blackwell, pp. 115–124, 2003.
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2003 | Journal Article | IST-REx-ID: 2994
D. Reinhardt et al., “Regulation of phyllotaxis by polar auxin transport,” Nature, vol. 426, no. 6964. Nature Publishing Group, pp. 255–260, 2003.
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2003 | Journal Article | IST-REx-ID: 2995
J. Friml et al., “Efflux dependent auxin gradients establish the apical basal axis of Arabidopsis,” Nature, vol. 426, no. 6963. Nature Publishing Group, pp. 147–153, 2003.
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2003 | Journal Article | IST-REx-ID: 2996
E. Benková et al., “Local, efflux-dependent auxin gradients as a common module for plant organ formation,” Cell, vol. 115, no. 5. Cell Press, pp. 591–602, 2003.
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2003 | Book Review | IST-REx-ID: 3139
H. Chen, S. Hippenmeyer, S. Arber, and E. Frank, “Development of the monosynaptic stretch reflex circuit,” Current Opinion in Neurobiology, vol. 13, no. 1. Elsevier, pp. 96–102, 2003.
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2003 | Journal Article | IST-REx-ID: 3150
D. E. Siekhaus and D. Drubin, “Spontaneous receptor-independent heterotrimeric G-protein signalling in an RGS mutant,” Nature Cell Biology, vol. 5, no. 3. Nature Publishing Group, pp. 231–235, 2003.
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2003 | Journal Article | IST-REx-ID: 3151
L. Rayburn et al., “Amontillado, the Drosophila homolog of the prohormone processing protease PC2, is required during embryogenesis and early larval development,” Genetics, vol. 163, no. 1. Genetics Society of America, pp. 227–237, 2003.
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2003 | Conference Paper | IST-REx-ID: 3170
Y. Boykov and V. Kolmogorov, “Computing geodesics and minimal surfaces via graph cuts,” presented at the ICCV: International Conference on Computer Vision, 2003, vol. 1, pp. 26–33.
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2003 | Conference Paper | IST-REx-ID: 3171
V. Kolmogorov, R. Zabih, and S. Gortler, “Generalized multi camera scene reconstruction using graph cuts,” presented at the EMMCVPR: Energy Minimization Methods in Computer Vision and Pattern Recognition, 2003, vol. 2683, pp. 501–516.
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2003 | Conference Paper | IST-REx-ID: 3174
J. Kim, V. Kolmogorov, and R. Zabih, “Visual correspondence using energy minimization and mutual information,” presented at the ICCV: International Conference on Computer Vision, 2003, vol. 2, pp. 1033–1040.
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2003 | Journal Article | IST-REx-ID: 3209
K. Z. Pietrzak, “On the parameterized complexity of the fixed alphabet shortest common supersequence and longest common subsequence problems,” Journal of Computer and System Sciences, vol. 67, no. 4. Elsevier, pp. 757–771, 2003.
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2003 | Conference Paper | IST-REx-ID: 3210
U. Maurer and K. Z. Pietrzak, “The security of many round Luby Rackoff pseudo random permutations,” presented at the EUROCRYPT: Theory and Applications of Cryptographic Techniques, 2003, vol. 2656, pp. 544–561.
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2003 | Journal Article | IST-REx-ID: 847
S. Sunyaev, F. Kondrashov, P. Bork, and V. Ramensky, “Impact of selection, mutation rate and genetic drift on human genetic variation,” Human Molecular Genetics, vol. 12, no. 24. Oxford University Press, pp. 3325–3330, 2003.
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2003 | Journal Article | IST-REx-ID: 8519
V. Kaloshin, “The existential Hilbert 16-th problem and an estimate for cyclicity of elementary polycycles,” Inventiones mathematicae, vol. 151, no. 3. Springer Nature, pp. 451–512, 2003.
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2003 | Thesis | IST-REx-ID: 4416
R. Majumdar, “Symbolic algorithms for verification and control,” University of California, Berkeley, 2003.
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