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8978 Publications


2013 | Conference Paper | IST-REx-ID: 2295 | OA [Published Version] View | Files available | DOI
 

2013 | Technical Report | IST-REx-ID: 5403 | OA
Qualitative analysis of concurrent mean-payoff games
K. Chatterjee, R. Ibsen-Jensen, Qualitative Analysis of Concurrent Mean-Payoff Games, IST Austria, 2013.
[Published Version] View | Files available | DOI
 

2013 | Technical Report | IST-REx-ID: 5402 | OA
How free is your linearizable concurrent data structure?
T.A. Henzinger, A. Sezgin, How Free Is Your Linearizable Concurrent Data Structure?, IST Austria, 2013.
[Published Version] View | Files available | DOI
 

2013 | Technical Report | IST-REx-ID: 5400 | OA
What is decidable about partially observable Markov decision processes with ω-regular objectives
K. Chatterjee, M. Chmelik, M. Tracol, What Is Decidable about Partially Observable Markov Decision Processes with ω-Regular Objectives, IST Austria, 2013.
[Published Version] View | Files available | DOI
 

2013 | Technical Report | IST-REx-ID: 5404 | OA
The complexity of ergodic games
K. Chatterjee, R. Ibsen-Jensen, The Complexity of Ergodic Games, IST Austria, 2013.
[Published Version] View | Files available | DOI
 

2013 | Report | IST-REx-ID: 5401 | OA
Initiatives and projects related to RD
J. Porsche, Initiatives and Projects Related to RD, IST Austria, 2013.
[Published Version] View | Files available
 

2013 | Technical Report | IST-REx-ID: 5405 | OA
Perfect-information stochastic mean-payoff parity games
K. Chatterjee, L. Doyen, H. Gimbert, Y. Oualhadj, Perfect-Information Stochastic Mean-Payoff Parity Games, IST Austria, 2013.
[Published Version] View | Files available | DOI
 

2013 | Technical Report | IST-REx-ID: 5409 | OA
Edit distance for timed automata
K. Chatterjee, R. Ibsen-Jensen, R. Majumdar, Edit Distance for Timed Automata, IST Austria, 2013.
[Published Version] View | Files available | DOI
 

2013 | Conference Paper | IST-REx-ID: 1376
Distributed synthesis for LTL fragments
K. Chatterjee, T.A. Henzinger, J. Otop, A. Pavlogiannis, in:, 13th International Conference on Formal Methods in Computer-Aided Design, IEEE, 2013, pp. 18–25.
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2013 | Technical Report | IST-REx-ID: 5406 | OA
Distributed synthesis for LTL Fragments
K. Chatterjee, T.A. Henzinger, J. Otop, A. Pavlogiannis, Distributed Synthesis for LTL Fragments, IST Austria, 2013.
[Published Version] View | Files available | DOI
 

2013 | Technical Report | IST-REx-ID: 5408 | OA
The complexity of partial-observation stochastic parity games with finite-memory strategies
K. Chatterjee, L. Doyen, S. Nain, M. Vardi, The Complexity of Partial-Observation Stochastic Parity Games with Finite-Memory Strategies, IST Austria, 2013.
[Published Version] View | Files available | DOI
 

2013 | Report | IST-REx-ID: 5407 | OA
Technical requirements and features
J. Porsche, Technical Requirements and Features, IST Austria, 2013.
[Published Version] View | Files available
 

2013 | Technical Report | IST-REx-ID: 5410 | OA
Automatic generation of alternative starting positions for traditional board games
U. Ahmed, K. Chatterjee, S. Gulwani, Automatic Generation of Alternative Starting Positions for Traditional Board Games, IST Austria, 2013.
[Published Version] View | Files available | DOI
 

2013 | Conference Paper | IST-REx-ID: 2327 | OA
From model checking to model measuring
T.A. Henzinger, J. Otop, 8052 (2013) 273–287.
[Submitted Version] View | Files available | DOI
 

2013 | Conference Paper | IST-REx-ID: 590
Polarization dependent focusing
D. Schmid, T. Huang, R. Dirks, O. Hosten, P. Kwiat, in:, OSA, 2013.
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2013 | Journal Article | IST-REx-ID: 5920
Finiteness theorems and algorithms for permutation invariant chains of Laurent lattice ideals
C.J. Hillar, A. Martin del Campo Sanchez, Journal of Symbolic Computation 50 (2013) 314–334.
View | Files available | DOI
 

2013 | Journal Article | IST-REx-ID: 591
Adjustable and robust methods for polarization-dependent focusing
D. Schmid, T. Huang, S. Hazrat, R. Dirks, O. Hosten, S. Quint, D. Thian, P. Kwiat, Optics Express 21 (2013) 15538–15552.
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2013 | Journal Article | IST-REx-ID: 595 | OA
Struggling to let go: A non-coding RNA directs its own extension and destruction
C. Bernecky, P. Cramer, EMBO Journal 32 (2013) 771–772.
View | DOI | Download None (ext.)
 

2013 | Journal Article | IST-REx-ID: 6128 | OA
Cross-modulation of homeostatic responses to temperature, oxygen and carbon dioxide in C. elegans
E. Kodama-Namba, L.A. Fenk, A.J. Bretscher, E. Gross, K.E. Busch, M. de Bono, PLoS Genetics 9 (2013).
[Published Version] View | Files available | DOI | PubMed | Europe PMC
 

2013 | Journal Article | IST-REx-ID: 6130 | OA
Efficient genome editing in Caenorhabditis elegans by CRISPR-targeted homologous recombination
C. Chen, L.A. Fenk, M. de Bono, Nucleic Acids Research 41 (2013).
[Published Version] View | Files available | DOI | PubMed | Europe PMC
 

2013 | Journal Article | IST-REx-ID: 6133 | OA
In vivo genetic dissection of O2-evoked cGMP dynamics in a Caenorhabditis elegans gas sensor
A. Couto, S. Oda, V.O. Nikolaev, Z. Soltesz, M. de Bono, Proceedings of the National Academy of Sciences 110 (2013) E3301–E3310.
[Published Version] View | Files available | DOI | PubMed | Europe PMC
 

2013 | Journal Article | IST-REx-ID: 6135
Worms under stress: C. elegans stress response and its relevance to complex human disease and aging
M. Rodriguez, L.B. Snoek, M. de Bono, J.E. Kammenga, Trends in Genetics 29 (2013) 367–374.
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2013 | Book Chapter | IST-REx-ID: 6132
Optogenetic actuation, inhibition, modulation and readout for neuronal networks generating behavior in the nematode Caenorhabditis elegans
M. de Bono, W.R. Schafer, A. Gottschalk, in:, P. Hegemann, S. Sigrist (Eds.), Optogenetics, Walter de Gruyter, 2013, pp. 61–78.
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2013 | Journal Article | IST-REx-ID: 6370
Molecular origins of the high-performance nonlinear optical susceptibility in a phenolic polyene chromophore: Electron density distributions, hydrogen bonding, and ab initio calculations
T.-C. Lin, J.M. Cole, A.P. Higginbotham, A.J. Edwards, R.O. Piltz, J. Pérez-Moreno, J.-Y. Seo, S.-C. Lee, K. Clays, O.-P. Kwon, The Journal of Physical Chemistry C 117 (2013) 9416–9430.
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2013 | Technical Report | IST-REx-ID: 6440 | OA
Replacing competition with cooperation to achieve scalable lock-free FIFO queues
T.A. Henzinger, H. Payer, A. Sezgin, Replacing Competition with Cooperation to Achieve Scalable Lock-Free FIFO Queues , IST Austria, 2013.
[Published Version] View | Files available | DOI
 

2013 | Journal Article | IST-REx-ID: 6768 | OA
A finite difference scheme for the stack filter simulating the MCM
M. Mondelli, Image Processing On Line 3 (2013) 68–111.
[Published Version] View | Files available | DOI
 

2013 | Conference Paper | IST-REx-ID: 2329 | OA
Hyperplane separation technique for multidimensional mean-payoff games
K. Chatterjee, Y. Velner, 8052 (2013) 500–515.
[Preprint] View | Files available | DOI | Download Preprint (ext.) | arXiv
 

2013 | Journal Article | IST-REx-ID: 7306
A stable cathode for the aprotic Li–O2 battery
M.M. Ottakam Thotiyl, S.A. Freunberger, Z. Peng, Y. Chen, Z. Liu, P.G. Bruce, Nature Materials 12 (2013) 1050–1056.
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2013 | Journal Article | IST-REx-ID: 7307
Charging a Li–O2 battery using a redox mediator
Y. Chen, S.A. Freunberger, Z. Peng, O. Fontaine, P.G. Bruce, Nature Chemistry 5 (2013) 489–494.
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2013 | Journal Article | IST-REx-ID: 7596
Arabidopsis casein kinase1 proteins CK1.3 and CK1.4 phosphorylate cryptochrome2 to regulate blue light signaling
S. Tan, C. Dai, H.-T. Liu, H.-W. Xue, The Plant Cell 25 (2013) 2618–2632.
View | DOI | PubMed | Europe PMC
 

2013 | Journal Article | IST-REx-ID: 7595
Arabidopsis inositol 1,3,4-trisphosphate 5/6 kinase 2 is required for seed coat development
Y. Tang, S. Tan, H. Xue, Acta Biochimica et Biophysica Sinica 45 (2013) 549–560.
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2013 | Conference Paper | IST-REx-ID: 765
Randomized loose renaming in O(loglogn) time
D.-A. Alistarh, J. Aspnes, G. Giakkoupis, P. Woelfel, in:, ACM, 2013, pp. 200–209.
View | DOI
 

2013 | Journal Article | IST-REx-ID: 7745
Partitioning of genetic variation across the genome using multimarker methods in a wild bird population
M.R. Robinson, A.W. Santure, I. DeCauwer, B.C. Sheldon, J. Slate, Molecular Ecology 22 (2013) 3963–3980.
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2013 | Journal Article | IST-REx-ID: 7746
Genomic dissection of variation in clutch size and egg mass in a wild great tit (Parus major) population
A.W. Santure, I. De Cauwer, M.R. Robinson, J. Poissant, B.C. Sheldon, J. Slate, Molecular Ecology 22 (2013) 3949–3962.
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2013 | Journal Article | IST-REx-ID: 7747 View | DOI
 

2013 | Journal Article | IST-REx-ID: 7775
Stability of jammed packings II: The transverse length scale
S.S. Schoenholz, C.P. Goodrich, O. Kogan, A.J. Liu, S.R. Nagel, Soft Matter 9 (2013).
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2013 | Journal Article | IST-REx-ID: 7774
Stability of jammed packings I: The rigidity length scale
C.P. Goodrich, W.G. Ellenbroek, A.J. Liu, Soft Matter 9 (2013).
View | DOI
 

2013 | Journal Article | IST-REx-ID: 8030 | OA
Inhibitory synaptic plasticity: Spike timing-dependence and putative network function
T.P. Vogels, R.C. Froemke, N. Doyon, M. Gilson, J.S. Haas, R. Liu, A. Maffei, P. Miller, C.J. Wierenga, M.A. Woodin, F. Zenke, H. Sprekeler, Frontiers in Neural Circuits 7 (2013).
[Published Version] View | Files available | DOI | PubMed | Europe PMC
 

2013 | Journal Article | IST-REx-ID: 811
Rac function is crucial for cell migration but is not required for spreading and focal adhesion formation
A. Steffen, M. Ladwein, G.A. Dimchev, A. Hein, L. Schwenkmezger, S. Arens, K. Ladwein, J. Holleboom, F.K. Schur, J. Small, J. Schwarz, R. Gerhard, J. Faix, T. Stradal, C. Brakebusch, K. Rottner, Journal of Cell Science 126 (2013) 4572–4588.
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2013 | Journal Article | IST-REx-ID: 812
Arp2/3 complex is essential for actin network treadmilling as well as for targeting of capping protein and cofilin
S. Koestler, A. Steffen, M. Nemethova, M. Winterhoff, N. Luo, J. Holleboom, J. Krupp, S. Jacob, M. Vinzenz, F.K. Schur, K. Schlüter, P. Gunning, C. Winkler, C. Schmeiser, J. Faix, T. Stradal, J. Small, K. Rottner, Molecular Biology of the Cell 24 (2013) 2861–2875.
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2013 | Journal Article | IST-REx-ID: 810
Determination of protein structure at 8.5Å resolution using cryo-electron tomography and sub-tomogram averaging
F.K. Schur, W. Hagen, A. De Marco, J. Briggs, Journal of Structural Biology 184 (2013) 394–400.
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2013 | Journal Article | IST-REx-ID: 8245 | OA
Trastuzumab mediates antibody-dependent cell-mediated cytotoxicity and phagocytosis to the same extent in both adjuvant and metastatic HER2/neu breast cancer patients
B. Petricevic, J. Laengle, J. Singer, M. Sachet, J. Singer, G. Steger, R. Bartsch, E. Jensen-Jarolim, M. Bergmann, Journal of Translational Medicine 11 (2013).
View | Files available | DOI | PubMed | Europe PMC
 

2013 | Journal Article | IST-REx-ID: 827 | OA
Cytokinin cross talking during biotic and abiotic stress responses
J. O’Brien, E. Benková, Frontiers in Plant Science 4 (2013).
[Published Version] View | Files available | DOI
 

2013 | Journal Article | IST-REx-ID: 828 | OA
Systems approaches to study root architecture dynamics
C. Cuesta, K.T. Wabnik, E. Benková, Frontiers in Plant Science 4 (2013).
[Published Version] View | Files available | DOI
 

2013 | Journal Article | IST-REx-ID: 830
An integrative model of the control of ovule primordia formation
F. Galbiati, D. Sinha Roy, S. Simonini, M. Cucinotta, L. Ceccato, C. Cuesta, M. Šimášková, E. Benková, Y. Kamiuchi, M. Aida, D. Weijers, R. Simon, S. Masiero, L. Colombo, The Plant Journal for Cell and Molecular Biology 76 (2013) 446–455.
View | DOI | PubMed | Europe PMC
 

2013 | Journal Article | IST-REx-ID: 831
Sequential induction of auxin efflux and influx carriers regulates lateral root emergence
Péret B, Middleton A, French A, Larrieu A, Bishopp A, Njo M, Wells D, Porco S, Mellor N, Band L, Casimiro I, Kleine Vehn J, Vanneste S, Sairanen I, Mallet R, Sandberg G, Ljung K, Beeckman T, Benková E, Friml J, Kramer E, King J, De Smet I, Pridmore T, Owen M, Bennett M. 2013. Sequential induction of auxin efflux and influx carriers regulates lateral root emergence. Molecular Systems Biology. 9.
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2013 | Journal Article | IST-REx-ID: 8462
Oligomeric states along the folding pathways of β2-microglobulin: Kinetics, thermodynamics, and structure
E. Rennella, T. Cutuil, P. Schanda, I. Ayala, F. Gabel, V. Forge, A. Corazza, G. Esposito, B. Brutscher, Journal of Molecular Biology 425 (2013) 2722–2736.
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2013 | Journal Article | IST-REx-ID: 899
Breen et al. reply
M. Breen, C. Kemena, P. Vlasov, C. Notredame, F. Kondrashov, Nature 497 (2013) E2–E3.
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2013 | Journal Article | IST-REx-ID: 9674
The crystal structures of sintered copper nanoparticles: A molecular dynamics study
B. Cheng, A.H.W. Ngan, International Journal of Plasticity 47 (2013) 65–79.
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