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6694 Publications


2004 | Book Chapter | IST-REx-ID: 4239
A Mechanism for the Prebiotic Emergence of Proteins
H. de Vladar, R. Cipriani, B. Scharifker, J. Bubis, in:, J. Seckbach, J. Chela Flores, T. Owen, F. Raulin (Eds.), Life in the Universe From the Miller Experiment to the Search for Life on Other Worlds, Springer, 2004, pp. 83–87.
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2004 | Journal Article | IST-REx-ID: 4253
Coalescence in a Random Background
N.H. Barton, A. Etheridge, A. Sturm, Annals of Applied Probability 14 (2004) 754–785.
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2004 | Conference Paper | IST-REx-ID: 4372
Monitoring Temporal Properties of Continuous Signals
O. Maler, D. Nickovic, in:, Springer, 2004, pp. 152–166.
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2004 | Thesis | IST-REx-ID: 4424
Program verification by lazy abstraction
R. Jhala, Program Verification by Lazy Abstraction, University of California, Berkeley, 2004.
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2004 | Conference Paper | IST-REx-ID: 4445
A typed assembly language for real-time programs
T.A. Henzinger, C. Kirsch, in:, ACM, 2004, pp. 104–113.
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2004 | Conference Paper | IST-REx-ID: 4458
Abstractions from proofs
T.A. Henzinger, R. Jhala, R. Majumdar, K. Mcmillan, in:, ACM, 2004, pp. 232–244.
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2004 | Conference Paper | IST-REx-ID: 4459
Race checking by context inference
T.A. Henzinger, R. Jhala, R. Majumdar, in:, ACM, 2004, pp. 1–13.
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2004 | Book Chapter | IST-REx-ID: 4461
Extreme model checking
T.A. Henzinger, R. Jhala, R. Majumdar, M. Sanvido, in:, Verification: Theory and Practice, Springer, 2004, pp. 332–358.
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2004 | Conference Paper | IST-REx-ID: 4525
Event-driven programming with logical execution times
A. Ghosal, T.A. Henzinger, C. Kirsch, M. Sanvido, in:, Springer, 2004, pp. 167–170.
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2004 | Conference Paper | IST-REx-ID: 4555
Trading memory for randomness
K. Chatterjee, L. De Alfaro, T.A. Henzinger, in:, IEEE, 2004, pp. 206–217.
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2004 | Journal Article | IST-REx-ID: 4556
Stack size analysis for interrupt-driven programs
K. Chatterjee, D. Ma, R. Majumdar, T. Zhao, T.A. Henzinger, J. Palsberg, Information and Computation 194 (2004) 144–174.
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2004 | Conference Paper | IST-REx-ID: 4558
Quantitative stochastic parity games
K. Chatterjee, M. Jurdziński, T.A. Henzinger, in:, SIAM, 2004, pp. 121–130.
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2004 | Conference Paper | IST-REx-ID: 4577
An eclipse plug-in for model checking
D. Beyer, T.A. Henzinger, R. Jhala, R. Majumdar, in:, IEEE, 2004, pp. 251–255.
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2004 | Conference Paper | IST-REx-ID: 4578
The BLAST query language for software verification
D. Beyer, A. Chlipala, T.A. Henzinger, R. Jhala, R. Majumdar, in:, Springer, 2004, pp. 2–18.
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2004 | Conference Paper | IST-REx-ID: 4581
Generating tests from counterexamples
D. Beyer, A. Chlipala, T.A. Henzinger, R. Jhala, R. Majumdar, in:, IEEE, 2004, pp. 326–335.
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2004 | Journal Article | IST-REx-ID: 2997
A PINOID-dependent binary switch in apical-basal PIN polar targeting directs auxin efflux
J. Friml, X. Yang, M. Michniewicz, D. Weijers, A. Quint, O. Tietz, R. Benjamins, P. Ouwerkerk, K. Ljung, G. Sandberg, P. Hooykaas, K. Palme, R. Offringa, Science 306 (2004) 862–865.
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2004 | Journal Article | IST-REx-ID: 2998
The chromatin remodelling complex FACT associates with actively transcribed regions of the Arabidopsis genome
M. Duroux, A. Houben, K. Růžička, J. Friml, K. Grasser, Plant Journal 40 (2004) 660–671.
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2004 | Journal Article | IST-REx-ID: 2999
In vitro culture of Arabidopsis embryos within their ovules
M. Sauer, J. Friml, Plant Journal 40 (2004) 835–843.
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2004 | Book Review | IST-REx-ID: 3142
Control of neuronal phenotype: What targets tell the cell bodies
S. Hippenmeyer, I. Kramer, S. Arber, Trends in Neurosciences 27 (2004) 482–488.
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2004 | Journal Article | IST-REx-ID: 3172
Multiprocessor scheduling implementation of the simultaneous multiple volume SMV navigator method
V. Kolmogorov, T. Nguyen, A. Nuval, P. Spincemaille, M. Prince, R. Zabih, Y. Wang, Magnetic Resonance in Medicine 52 (2004) 362–367.
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2004 | Journal Article | IST-REx-ID: 3173
What energy functions can be minimized via graph cuts?
V. Kolmogorov, R. Zabih, IEEE Transactions on Pattern Analysis and Machine Intelligence 26 (2004) 147–159.
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2004 | Conference Paper | IST-REx-ID: 3177
Spatially coherent clustering using graph cuts
R. Zabih, V. Kolmogorov, in:, IEEE, 2004, pp. 437–444.
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2004 | Journal Article | IST-REx-ID: 3178
An experimental comparison of min-cut/max-flow algorithms for energy minimization in vision
Y. Boykov, V. Kolmogorov, IEEE Transactions on Pattern Analysis and Machine Intelligence 26 (2004) 1124–1137.
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2004 | Conference Paper | IST-REx-ID: 3179
"GrabCut" - Interactive foreground extraction using iterated graph cuts
C. Rother, V. Kolmogorov, A. Blake, in:, ACM, 2004, pp. 309–314.
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2004 | Conference Paper | IST-REx-ID: 3208
Composition of random systems: When two weak make one strong
U. Maurer, K.Z. Pietrzak, in:, Springer, 2004, pp. 410–427.
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2004 | Journal Article | IST-REx-ID: 3419
Probing the energy landscape of the membrane protein bacteriorhodopsin
H.L. Janovjak, J. Struckmeier, M. Hubain, M. Kessler, A. Kedrov, D. Mueller, Structure 12 (2004) 871–879.
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2004 | Journal Article | IST-REx-ID: 3420
Controlled unfolding and refolding of a single sodium/proton antiporter using atomic force microscopy
A. Kedrov, C. Ziegler, H.L. Janovjak, W. Kühlbrandt, D. Mueller, Journal of Molecular Biology 340 (2004) 1143–1152.
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2004 | Book Chapter | IST-REx-ID: 3574
Biological applications of computational topology
H. Edelsbrunner, in:, Handbook of Discrete and Computational Geometry, CRC Press, 2004, pp. 1395–1412.
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2004 | Book Chapter | IST-REx-ID: 3575
Jacobi sets of multiple Morse functions
H. Edelsbrunner, J. Harer, in:, Foundations of Computational Mathematics, Springer, 2004, pp. 37–57.
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2004 | Book Chapter | IST-REx-ID: 3587
Gastrulation in zebrafish
F. Ulrich, C.-P.J. Heisenberg, in:, V. Korzh, Z. Gong (Eds.), Fish Development and Genetics : The Zebrafish and Medaka Models, World Scientific Publishing, 2004, pp. 39–86.
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2004 | Book Review | IST-REx-ID: 3595
Genome size: Does bigger mean worse?
B. Charlesworth, N.H. Barton, Current Biology 14 (2004) R233–R235.
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2004 | Journal Article | IST-REx-ID: 3614
Effects of allele frequency changes on variance components under a general model of epistasis
N.H. Barton, M. Turelli, Evolution; International Journal of Organic Evolution 58 (2004) 2111–2132.
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2004 | Journal Article | IST-REx-ID: 3615 View | DOI
 

2004 | Book Review | IST-REx-ID: 3616
Speciation: Why, how, where and when?
N.H. Barton, Current Biology 14 (2004) R603–R604.
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2004 | Journal Article | IST-REx-ID: 3617
The effect of selection on genealogies
N.H. Barton, A. Etheridge, Genetics 166 (2004) 1115–1131.
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2004 | Conference Paper | IST-REx-ID: 3688
Document capture using stereo vision
A. Ulges, C. Lampert, T. Breuel, in:, ACM, 2004, pp. 198–200.
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2004 | Journal Article | IST-REx-ID: 9493 | OA
Role of Arabidopsis ARGONAUTE4 in RNA-directed DNA methylation triggered by inverted repeats
D. ZILBERMAN, X. Cao, L.K. Johansen, Z. Xie, J.C. Carrington, S.E. Jacobsen, Current Biology 14 (2004) 1214–1220.
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2004 | Journal Article | IST-REx-ID: 9454
RNA silencing genes control de novo DNA methylation
S.W.-L. Chan, D. ZILBERMAN, Zhixin Xie, Lisa K. Johansen, J.C. Carrington, S.E. Jacobsen, Science 303 (2004) 1336.
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2004 | Journal Article | IST-REx-ID: 9517 | OA
Genetic and functional diversification of small RNA pathways in plants
Z. Xie, L.K. Johansen, A.M. Gustafson, K.D. Kasschau, A.D. Lellis, D. ZILBERMAN, S.E. Jacobsen, J.C. Carrington, PLoS Biology 2 (2004) 0642–0652.
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2004 | Journal Article | IST-REx-ID: 9511 | OA
Silencing of transposons in plant genomes: kick them when they're down
D. ZILBERMAN, S. Henikoff, Genome Biology 5 (2004).
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2003 | Conference Paper | IST-REx-ID: 2337 | OA
Bose-Einstein condensation of dilute gases in traps
É. Lieb, R. Seiringer, in:, Y. Karpeshina, R. Weikard, Y. Zeng (Eds.), American Mathematical Society, 2003, pp. 239–250.
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2003 | Journal Article | IST-REx-ID: 2354 | OA
Ground state asymptotics of a dilute, rotating gas
R. Seiringer, Journal of Physics A: Mathematical and Theoretical 36 (2003) 9755–9778.
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2003 | Journal Article | IST-REx-ID: 2357 | OA
Poincaré inequalities in punctured domains
É. Lieb, R. Seiringer, J. Yngvason, Annals of Mathematics 158 (2003) 1067–1080.
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2003 | Journal Article | IST-REx-ID: 2358 | OA
One-dimensional Bosons in three-dimensional traps
É. Lieb, R. Seiringer, J. Yngvason, Physical Review Letters 91 (2003) 1504011–1504014.
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2003 | Thesis | IST-REx-ID: 2414
On k-Sets and Their Applications
U. Wagner, On K-Sets and Their Applications, ETH Zurich, 2003.
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2003 | Conference Paper | IST-REx-ID: 2422
On the rectilinear crossing number of complete graphs
U. Wagner, in:, SIAM, 2003, pp. 583–588.
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2003 | Conference Paper | IST-REx-ID: 2423
New constructions of weak epsilon-nets
J. Matoušek, U. Wagner, in:, ACM, 2003, pp. 129–135.
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2003 | Conference Paper | IST-REx-ID: 2424 View | DOI
 

2003 | Journal Article | IST-REx-ID: 2623
Mechanisms underlying cerebellar motor deficits due to mGluR1-autoantibodies
M. Coesmans, P. Sillevis Smitt, D. Linden, R. Shigemoto, T. Hirano, Y. Yamakawa, A. Van Alphen, C. Luo, J. Van Der Geest, J. Kros, C. Gaillard, M. Frens, C. De Zeeuw, Annals of Neurology 53 (2003) 325–336.
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2003 | Journal Article | IST-REx-ID: 2625
Long-term potentiation of mGluR1 activity by depolarization-induced Homer1a in mouse cerebellar Purkinje neurons
I. Minami, M. Kengaku, S. Smitt, R. Shigemoto, T. Hirano, European Journal of Neuroscience 17 (2003) 1023–1032.
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