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9070 Publications


2014 | Journal Article | IST-REx-ID: 8021 | OA
Araya, R., et al. “Activity-Dependent Dendritic Spine Neck Changes Are Correlated with Synaptic Strength.” Proceedings of the National Academy of Sciences, vol. 111, no. 28, Proceedings of the National Academy of Sciences, 2014, pp. E2895–904, doi:10.1073/pnas.1321869111.
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2014 | Journal Article | IST-REx-ID: 8023 | OA
Tomm, Christian, et al. “Connection-Type-Specific Biases Make Uniform Random Network Models Consistent with Cortical Recordings.” Journal of Neurophysiology, vol. 112, no. 8, American Physiological Society, 2014, pp. 1801–14, doi:10.1152/jn.00629.2013.
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2014 | Journal Article | IST-REx-ID: 8022 | OA
Hennequin, Guillaume, et al. “Optimal Control of Transient Dynamics in Balanced Networks Supports Generation of Complex Movements.” Neuron, vol. 82, no. 6, Elsevier, 2014, pp. 1394–406, doi:10.1016/j.neuron.2014.04.045.
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2014 | Journal Article | IST-REx-ID: 809
Bharata, Tanmay, et al. “Cryo Electron Microscopy of Tubular Arrays of HIV-1 Gag Resolves Structures Essential for Immature Virus Assembly.” PNAS, vol. 111, no. 22, National Academy of Sciences, 2014, pp. 8233–38, doi:10.1073/pnas.1401455111.
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2014 | Journal Article | IST-REx-ID: 8244
Singer, J., et al. “Generation of a Canine Anti-EGFR (ErbB-1) Antibody for Passive Immunotherapy in Dog Cancer Patients.” Molecular Cancer Therapeutics, vol. 13, no. 7, American Association for Cancer Research, 2014, pp. 1777–90, doi:10.1158/1535-7163.mct-13-0288.
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2014 | Journal Article | IST-REx-ID: 8459
Morin, Sébastien, et al. “Relax: The Analysis of Biomolecular Kinetics and Thermodynamics Using NMR Relaxation Dispersion Data.” Bioinformatics, vol. 30, no. 15, Oxford University Press, 2014, pp. 2219–20, doi:10.1093/bioinformatics/btu166.
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2014 | Journal Article | IST-REx-ID: 8458
Schanda, Paul, et al. “Atomic Model of a Cell-Wall Cross-Linking Enzyme in Complex with an Intact Bacterial Peptidoglycan.” Journal of the American Chemical Society, vol. 136, no. 51, American Chemical Society, 2014, pp. 17852–60, doi:10.1021/ja5105987.
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2014 | Journal Article | IST-REx-ID: 8460
Ma, Peixiang, et al. “Probing Transient Conformational States of Proteins by Solid-State R1ρ Relaxation-Dispersion NMR Spectroscopy.” Angewandte Chemie International Edition, vol. 53, no. 17, Wiley, 2014, pp. 4312–17, doi:10.1002/anie.201311275.
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2014 | Journal Article | IST-REx-ID: 8501
Bounemoura, Abed, and Vadim Kaloshin. “Generic Fast Diffusion for a Class of Non-Convex Hamiltonians with Two Degrees of Freedom.” Moscow Mathematical Journal, vol. 14, no. 2, Independent University of Moscow, 2014, pp. 181–203, doi:10.17323/1609-4514-2014-14-2-181-203.
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2014 | Journal Article | IST-REx-ID: 8500
Kaloshin, Vadim, et al. “Arnol′d Diffusion in a Pendulum Lattice.” Communications on Pure and Applied Mathematics, vol. 67, no. 5, Wiley, 2014, pp. 748–75, doi:10.1002/cpa.21509.
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2014 | Journal Article | IST-REx-ID: 852
Rosello, Oriol, and Fyodor Kondrashov. “Long-Term Asymmetrical Acceleration of Protein Evolution after Gene Duplication.” Genome Biology and Evolution, vol. 6, no. 8, Oxford University Press, 2014, pp. 1949–55, doi:10.1093/gbe/evu159.
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2014 | Journal Article | IST-REx-ID: 856
Pougach, Ksenia, et al. “Duplication of a Promiscuous Transcription Factor Drives the Emergence of a New Regulatory Network.” Nature Communications, vol. 5, Nature Publishing Group, 2014, doi:10.1038/ncomms5868.
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2014 | Journal Article | IST-REx-ID: 863
Moroz L, Kocot K, Citarella M, Dosung S, Norekian T, Povolotskaya I, Grigorenko A, Dailey C, Berezikov E, Buckley K, Ptitsyn A, Reshetov D, Mukherjee K, Moroz T, Bobkova Y, Yu F, Kapitonov V, Jurka J, Bobkov Y, Swore J, Girardo D, Fodor A, Gusev F, Sanford R, Bruders R, Kittler E, Mills C, Rast J, Derelle R, Solovyev V, Kondrashov F, Swalla B, Sweedler J, Rogaev E, Halanych K, Kohn A. 2014. The ctenophore genome and the evolutionary origins of neural systems. Nature. 510(7503), 109–114.
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2014 | Journal Article | IST-REx-ID: 865
Koval, Alexey, et al. “Anti Leprosy Drug Clofazimine Inhibits Growth of Triple-Negative Breast Cancer Cells via Inhibition of Canonical Wnt Signaling.” Biochemical Pharmacology, vol. 87, no. 4, Elsevier, 2014, pp. 571–78, doi:10.1016/j.bcp.2013.12.007.
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2014 | Journal Article | IST-REx-ID: 925
Dong, Bo, et al. “Balance between Apical Membrane Growth and Luminal Matrix Resistance Determines Epithelial Tubule Shape.” Cell Reports, vol. 7, no. 4, Cell Press, 2014, pp. 941–50, doi:10.1016/j.celrep.2014.03.066.
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2014 | Journal Article | IST-REx-ID: 927
Hannezo, Edouard B., et al. “Theory of Epithelial Sheet Morphology in Three Dimensions.” PNAS, vol. 111, no. 1, National Academy of Sciences, 2014, pp. 27–32, doi:10.1073/pnas.1312076111.
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2014 | Journal Article | IST-REx-ID: 9519
Kim, M. Yvonne, and Daniel Zilberman. “DNA Methylation as a System of Plant Genomic Immunity.” Trends in Plant Science, vol. 19, no. 5, Elsevier, 2014, pp. 320–26, doi:10.1016/j.tplants.2014.01.014.
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2014 | Journal Article | IST-REx-ID: 96 | OA
Higginbotham, Andrew P., et al. “Coherent Operations and Screening in Multielectron Spin Qubits.” APS Physics, Physical Review Letters, vol. 112, no. 2, 026801, American Physiological Society, 2014, doi:10.1103/PhysRevLett.112.026801.
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2014 | Journal Article | IST-REx-ID: 9594 | OA
Greenhill, Catherine, et al. “On the Number of Spanning Trees in Random Regular Graphs.” The Electronic Journal of Combinatorics, vol. 21, no. 1, P1.45, The Electronic Journal of Combinatorics, 2014, doi:10.37236/3752.
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2014 | Journal Article | IST-REx-ID: 9655 | OA
Perkovic, Mario, et al. “Correlative Light- and Electron Microscopy with Chemical Tags.” Journal of Structural Biology, vol. 186, no. 2, Elsevier, 2014, pp. 205–13, doi:10.1016/j.jsb.2014.03.018.
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2014 | Journal Article | IST-REx-ID: 9686
Cheng, Bingqing, et al. “Strength of Metals under Vibrations – Dislocation-Density-Function Dynamics Simulations.” Philosophical Magazine, vol. 95, no. 16–18, Taylor & Francis, 2014, pp. 1845–65, doi:10.1080/14786435.2014.897008.
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2014 | Journal Article | IST-REx-ID: 2083 | OA
Lagator, Mato, et al. “Role of Sex and Migration in Adaptation to Sink Environments.” Evolution, vol. 68, no. 8, Wiley, 2014, pp. 2296–305, doi:10.1111/evo.12440.
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2014 | Research Data Reference | IST-REx-ID: 9747 | OA
Lagator, Mato, et al. Data from: Role of Sex and Migration in Adaptation to Sink Environments. Dryad, 2014, doi:10.5061/dryad.s42n1.
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2014 | Journal Article | IST-REx-ID: 977 | OA
Serbyn, Maksym, et al. “Interferometric Probes of Many-Body Localization.” Physical Review Letters, vol. 113, no. 14, American Physical Society, 2014, doi:10.1103/PhysRevLett.113.147204.
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2014 | Journal Article | IST-REx-ID: 980 | OA
Serbyn, Maksym, et al. “Quantum Quenches in the Many-Body Localized Phase.” Physical Review B - Condensed Matter and Materials Physics, vol. 90, no. 17, American Physical Society, 2014, doi:10.1103/PhysRevB.90.174302.
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2014 | Journal Article | IST-REx-ID: 98 | OA
Higginbotham, Andrew P., et al. “Hole Spin Coherence in a Ge/Si Heterostructure Nanowire.” Nano Letters, vol. 14, no. 6, American Chemical Society, 2014, pp. 3582–86, doi:10.1021/nl501242b.
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2014 | Journal Article | IST-REx-ID: 2086 | OA
Wolf, Stephan, et al. “So near and yet so Far: Harmonic Radar Reveals Reduced Homing Ability of Nosema Infected Honeybees.” PLoS One, vol. 9, no. 8, e103989, Public Library of Science, 2014, doi:10.1371/journal.pone.0103989.
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2014 | Research Data Reference | IST-REx-ID: 9888
Wolf, Stephan, et al. Supporting Information. Public Library of Science, 2014, doi:10.1371/journal.pone.0103989.s003.
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2014 | Journal Article | IST-REx-ID: 845
Seplyarskiy, Vladimir, et al. “Crossing-over in a Hypervariable Species Preferentially Occurs in Regions of High Local Similarity.” Molecular Biology and Evolution, vol. 31, no. 11, Oxford University Press, 2014, pp. 3016–25, doi:10.1093/molbev/msu242.
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2014 | Journal Article | IST-REx-ID: 892
Ivankov, Dmitry, et al. “A Structural Perspective of Compensatory Evolution.” Current Opinion in Structural Biology, vol. 26, no. 1, Elsevier, 2014, pp. 104–12, doi:10.1016/j.sbi.2014.05.004.
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2014 | Journal Article | IST-REx-ID: 9050 | OA
Takagi, Daisuke, et al. “Hydrodynamic Capture of Microswimmers into Sphere-Bound Orbits.” Soft Matter, vol. 10, no. 11, 1784, Royal Society of Chemistry , 2014, doi:10.1039/c3sm52815d.
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2014 | Journal Article | IST-REx-ID: 9166 | OA
Palacci, Jérémie A., et al. “Light-Activated Self-Propelled Colloids.” Philosophical Transactions of the Royal Society A: Mathematical, Physical and Engineering Sciences, vol. 372, no. 2029, 20130372, The Royal Society, 2014, doi:10.1098/rsta.2013.0372.
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2014 | Journal Article | IST-REx-ID: 926
Hannezo, Edouard B., et al. “Growth Homeostatic Regulation and Stem Cell Dynamics in Tissues.” Journal of the Royal Society Interface, vol. 11, no. 93, Royal Society of London, 2014, doi:10.1098/rsif.2013.0895.
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2014 | Journal Article | IST-REx-ID: 9458 | OA
Huff, Jason T., and Daniel Zilberman. “Dnmt1-Independent CG Methylation Contributes to Nucleosome Positioning in Diverse Eukaryotes.” Cell, vol. 156, no. 6, Elsevier, 2014, pp. 1286–97, doi:10.1016/j.cell.2014.01.029.
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2014 | Journal Article | IST-REx-ID: 9479 | OA
Mérai, Zsuzsanna, et al. “The AAA-ATPase Molecular Chaperone Cdc48/P97 Disassembles Sumoylated Centromeres, Decondenses Heterochromatin, and Activates Ribosomal RNA Genes.” Proceedings of the National Academy of Sciences, vol. 111, no. 45, National Academy of Sciences, 2014, pp. 16166–71, doi:10.1073/pnas.1418564111.
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2014 | Journal Article | IST-REx-ID: 9662 | OA
Cheng, Bingqing, and Michele Ceriotti. “Direct Path Integral Estimators for Isotope Fractionation Ratios.” The Journal of Chemical Physics, vol. 141, no. 24, 244112, AIP Publishing, 2014, doi:10.1063/1.4904293.
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2014 | Journal Article | IST-REx-ID: 97 | OA
Higginbotham, Andrew P., et al. “Antilocalization of Coulomb Blockade in a Ge/Si Nanowire.” APS Physics, Physical Review Letters, vol. 112, no. 21, 216806, American Physical Society, 2014, doi:10.1103/PhysRevLett.112.216806.
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2014 | Journal Article | IST-REx-ID: 2004 | OA
Lovrics, Anna, et al. “Boolean Modelling Reveals New Regulatory Connections between Transcription Factors Orchestrating the Development of the Ventral Spinal Cord.” PLoS One, vol. 9, no. 11, e111430, Public Library of Science, 2014, doi:10.1371/journal.pone.0111430.
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2014 | Research Data Reference | IST-REx-ID: 9722
Lovrics, Anna, et al. Transition Probability between TF Expression States When Dbx2 Inhibits Nkx2.2. Public Library of Science, 2014, doi:10.1371/journal.pone.0111430.s006.
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2014 | Journal Article | IST-REx-ID: 2039 | OA
Chatterjee, Krishnendu, et al. “The Time Scale of Evolutionary Innovation.” PLoS Computational Biology, vol. 10, no. 9, 7p, Public Library of Science, 2014, doi:10.1371/journal.pcbi.1003818.
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2014 | Journal Article | IST-REx-ID: 2161
Westhus, Claudia, et al. “Increased Grooming after Repeated Brood Care Provides Sanitary Benefits in a Clonal Ant.” Behavioral Ecology and Sociobiology, vol. 68, no. 10, Springer, 2014, pp. 1701–10, doi:10.1007/s00265-014-1778-8.
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2014 | Journal Article | IST-REx-ID: 2036 | OA
Lagator, Mato, et al. “Selection History and Epistatic Interactions Impact Dynamics of Adaptation to Novel Environmental Stresses.” Proceedings of the Royal Society of London Series B Biological Sciences, vol. 281, no. 1794, 20141679, Royal Society, The, 2014, doi:10.1098/rspb.2014.1679.
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2014 | Research Data Reference | IST-REx-ID: 9740 | OA
Konrad, Matthias, et al. Data from: Anti-Pathogen Protection versus Survival Costs Mediated by an Ectosymbiont in an Ant Host. Dryad, 2014, doi:10.5061/dryad.vm0vc.
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2014 | Research Data Reference | IST-REx-ID: 9741 | OA
Lagator, Mato, et al. Data from: Selection History and Epistatic Interactions Impact Dynamics of Adaptation to Novel Environmental Stresses. Dryad, 2014, doi:10.5061/dryad.85dn7.
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2014 | Research Data Reference | IST-REx-ID: 9739
Chatterjee, Krishnendu, et al. Detailed Proofs for “The Time Scale of Evolutionary Innovation.” Public Library of Science, 2014, doi:10.1371/journal.pcbi.1003818.s001.
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2014 | Journal Article | IST-REx-ID: 2170 | OA
Hearn, Jack, et al. “Likelihood-Based Inference of Population History from Low-Coverage de Novo Genome Assemblies.” Molecular Ecology, vol. 23, no. 1, Wiley-Blackwell, 2014, pp. 198–211, doi:10.1111/mec.12578.
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2014 | Research Data Reference | IST-REx-ID: 9753 | OA
Tragust, Simon, et al. Data from: Pupal Cocoons Affect Sanitary Brood Care and Limit Fungal Infections in Ant Colonies. Dryad, 2014, doi:10.5061/dryad.nc0gc.
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2014 | Research Data Reference | IST-REx-ID: 9752 | OA
Simmons, Kristina, et al. Data from: Transformation of Stimulus Correlations by the Retina. Dryad, 2014, doi:10.5061/dryad.246qg.
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2014 | Journal Article | IST-REx-ID: 978 | OA
Zeljkovic, Ilija, et al. “Mapping the Unconventional Orbital Texture in Topological Crystalline Insulators.” Nature Physics, vol. 10, no. 8, Nature Publishing Group, 2014, pp. 572–77, doi:10.1038/nphys3012.
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2014 | Journal Article | IST-REx-ID: 979 | OA
Serbyn, Maksym, and Liang Fu. “Symmetry Breaking and Landau Quantization in Topological Crystalline Insulators.” Physical Review B - Condensed Matter and Materials Physics, vol. 90, no. 3, American Physical Society, 2014, doi:10.1103/PhysRevB.90.035402.
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