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6694 Publications


2005 | Conference Paper | IST-REx-ID: 3896
Complexity of compositional model checking of computation tree logic on simple structures
K. Chatterjee, P. Dasgupta, P. Chakrabarti, in:, Springer, 2005, pp. 89–102.
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2005 | Conference Paper | IST-REx-ID: 3902
The drawback of mobility: invasive species in a globalised world
S. Cremer, J. Boomsma, in:, Elsevier, 2005.
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2005 | Journal Article | IST-REx-ID: 3915
Primary sex ratio adjustment by ant queens in response to local mate competition
L. De Menten, S. Cremer, J. Heinze, S. Aron, Animal Behaviour 69 (2005) 1031–1035.
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2005 | Journal Article | IST-REx-ID: 3916
Sexual cooperation: mating increases longevity in ant queens
A. Schrempf, J. Heinze, S. Cremer, Current Biology 15 (2005) 267–270.
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2005 | Journal Article | IST-REx-ID: 3933
The conduit system transports soluble antigens from the afferent lymph to resident dendritic cells in the T cell area of the lymph node
M.K. Sixt, N. Kanazawa, M. Selg, T. Samson, G. Roos, D. Reinhardt, R. Pabst, M. Lutz, L. Sorokin, Immunity 22 (2005) 19–29.
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2005 | Conference Paper | IST-REx-ID: 3982
Coarse and reliable geometric alignment for protein docking
Y. Wang, P. Agarwal, P. Brown, H. Edelsbrunner, J. Rudolph, in:, World Scientific Publishing, 2005, pp. 64–75.
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2005 | Journal Article | IST-REx-ID: 3983
Experimental validation of the docking orientation of Cdc25 with its Cdk2-CycA protein substrate
J. Sohn, J. Parks, G. Buhrman, P. Brown, K. Kristjánsdóttir, A. Safi, H. Edelsbrunner, W. Yang, J. Rudolph, Biochemistry 44 (2005) 16563–16573.
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2005 | Journal Article | IST-REx-ID: 4138
The limitations of adaptive dynamics as a model of evolution
N.H. Barton, J. Polechova, Journal of Evolutionary Biology 18 (2005) 1186–1190.
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2005 | Journal Article | IST-REx-ID: 4144
Wnt11 functions in gastrulation by controlling cell cohesion through Rab5c and E-cadherin
F. Ulrich, M. Krieg, E. Schötz, V. Link, I. Castanon, V. Schnabel, A. Taubenberger, D. Müller, P. Puech, C.-P.J. Heisenberg, Developmental Cell 9 (2005) 555–564.
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2005 | Journal Article | IST-REx-ID: 4155
Measuring cell adhesion forces of primary gastrulating cells from zebrafish using atomic force microscopy
P. Puech, A. Taubenberger, F. Ulrich, M. Krieg, D. Mueller, C.-P.J. Heisenberg, Journal of Cell Science 118 (2005) 4199–4206.
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2005 | Journal Article | IST-REx-ID: 4167
Monorail/Foxa2 regulates floorplate differentiation and specification of oligodendrocytes, serotonergic raphe neurones and cranial motoneurones
Norton W, Mangoli M, Lele Z, Pogoda H, Diamond B, Mercurio S, Russell C, Teraoka H, Stickney H, Rauch G, Heisenberg C-PJ, Houart C, Schilling T, Frohnhoefer H, Rastegar S, Neumann C, Gardiner RM, Strähle U, Geisler R, Rees M, Talbot W, Wilson S. 2005. Monorail/Foxa2 regulates floorplate differentiation and specification of oligodendrocytes, serotonergic raphe neurones and cranial motoneurones. Development. 132(4), 645–658.
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2005 | Journal Article | IST-REx-ID: 4171
Shield formation at the onset of zebrafish gastrulation
J. Montero, L. Carvalho, M. Wilsch Bräuninger, B. Kilian, C. Mustafa, C.-P.J. Heisenberg, Development 132 (2005) 1187–1198.
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2005 | Journal Article | IST-REx-ID: 4183
Misshapen mediates actin-based cell contraction during zebrafish epiboly and Drosophila dorsal closure
M. Köppen, B. Fernández, L. Carvalho, A. Jacinto, C.-P.J. Heisenberg, Mechanisms of Development 122 (2005) S112–S113.
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2005 | Journal Article | IST-REx-ID: 4249
Speciation through competition: A critical review
J. Polechova, N.H. Barton, Evolution; International Journal of Organic Evolution 59 (2005) 1194–1210.
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2005 | Journal Article | IST-REx-ID: 4251
Evolution of recombination due to random drift
N.H. Barton, S. Otto, Genetics 169 (2005) 2353–2370.
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2005 | Journal Article | IST-REx-ID: 4252 | OA
Theoretical models of selection and mutationon quantitative traits
T. Johnson, N.H. Barton, Philosophical Transactions of the Royal Society of London. Series B, Biological Sciences 360 (2005) 1411–1425.
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2005 | Conference Paper | IST-REx-ID: 4367
Boolean Heaps
A. Podelski, T. Wies, in:, Springer, 2005, pp. 267–282.
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2005 | Conference Paper | IST-REx-ID: 4404
Synthesis of interface specifications for Java classes
R. Alur, P. Cerny, P. Madhusudan, W. Nam, in:, ACM, 2005, pp. 98–109.
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2005 | Conference Paper | IST-REx-ID: 4412
Trading end-to-end latency for composability
S. Matic, T.A. Henzinger, in:, IEEE, 2005, pp. 99–110.
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2005 | Conference Paper | IST-REx-ID: 4418
A programmable microkernel for real-time systems
C. Kirsch, M. Sanvido, T.A. Henzinger, in:, ACM, 2005, pp. 35–45.
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2005 | Journal Article | IST-REx-ID: 4454
A classification of symbolic transition systems
T.A. Henzinger, R. Majumdar, J. Raskin, ACM Transactions on Computational Logic (TOCL) 6 (2005) 1–32.
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2005 | Conference Paper | IST-REx-ID: 4455
Quantifying similarities between timed systems
T.A. Henzinger, R. Majumdar, V. Prabhu, in:, Springer, 2005, pp. 226–241.
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2005 | Conference Paper | IST-REx-ID: 4456
Permissive interfaces
T.A. Henzinger, R. Jhala, R. Majumdar, in:, ACM, 2005, pp. 31–40.
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2005 | Conference Paper | IST-REx-ID: 4457
Composable code generation for distributed Giotto
T.A. Henzinger, C. Kirsch, S. Matic, in:, ACM, 2005, pp. 21–30.
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2005 | Conference Paper | IST-REx-ID: 4536
Automatic rectangular refinement of affine hybrid systems
L. Doyen, T.A. Henzinger, J. Raskin, in:, Springer, 2005, pp. 144–161.
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2005 | Conference Paper | IST-REx-ID: 4541
Semiperfect-information games
K. Chatterjee, T.A. Henzinger, in:, Schloss Dagstuhl - Leibniz-Zentrum für Informatik, 2005, pp. 1–18.
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2005 | Conference Paper | IST-REx-ID: 4553
The complexity of stochastic Rabin and Streett games
K. Chatterjee, L. De Alfaro, T.A. Henzinger, in:, Springer, 2005, pp. 878–890.
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2005 | Conference Paper | IST-REx-ID: 4554
Mean-payoff parity games
K. Chatterjee, T.A. Henzinger, M. Jurdziński, in:, IEEE, 2005, pp. 178–187.
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2005 | Conference Paper | IST-REx-ID: 4557
Counterexample-guided planning
K. Chatterjee, T.A. Henzinger, R. Jhala, R. Majumdar, in:, AUAI Press, 2005, pp. 104–111.
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2005 | Conference Paper | IST-REx-ID: 4560
Verifying quantitative properties using bound functions
A. Chakrabarti, K. Chatterjee, T.A. Henzinger, O. Kupferman, R. Majumdar, in:, Springer, 2005, pp. 50–64.
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2005 | Conference Paper | IST-REx-ID: 4576
Web service interfaces
D. Beyer, A. Chakrabarti, T.A. Henzinger, in:, ACM, 2005, pp. 148–159.
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2005 | Conference Paper | IST-REx-ID: 4579
Checking memory safety with BLAST
D. Beyer, T.A. Henzinger, R. Jhala, R. Majumdar, in:, Springer, 2005, pp. 2–18.
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2005 | Journal Article | IST-REx-ID: 3000
Cell polarity, auxin transport and cytoskeleton mediated division planes: Who comes first?
P. Dhonukshe, J. Kleine Vehn, J. Friml, Protoplasma 226 (2005) 67–73.
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2005 | Journal Article | IST-REx-ID: 3001
Auxin inhibits endocytosis and promotes its own efflux from cells
T. Paciorek, E. Zažímalová, N. Ruthardt, J. Petrášek, Y. Stierhof, J. Kleine Vehn, D. Morris, N. Emans, G. Jürgens, N. Geldner, J. Friml, Nature 435 (2005) 1251–1256.
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2005 | Journal Article | IST-REx-ID: 3003
Functional redundancy of PIN proteins is accompanied by auxin-dependent cross-regulation of PIN expression
A. Vieten, S. Vanneste, J. Wiśniewska, E. Benková, R. Benjamins, T. Beeckman, C. Luschnig, J. Friml, Development 132 (2005) 4521–4531.
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2005 | Journal Article | IST-REx-ID: 3004
Maintenance of embryonic auxin distribution for apical basal patterning by PIN FORMED dependent auxin transport in Arabidopsis
D. Weijers, M. Sauer, O. Meurette, J. Friml, K. Ljung, G. Sandberg, P. Hooykaas, R. Offringa, Plant Cell 17 (2005) 2517–2526.
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2005 | Journal Article | IST-REx-ID: 3141
Conformational changes in the Arp2 3 complex leading to actin nucleation
A. Rodal, O. Sokolova, D. Robins, K. Daugherty, S. Hippenmeyer, H. Riezman, N. Grigorieff, B. Goode, Nature Structural and Molecular Biology 12 (2005) 26–31.
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2005 | Journal Article | IST-REx-ID: 3143
A developmental switch in the response of DRG neurons to ETS transcription factor signaling
S. Hippenmeyer, E. Vrieseling, M. Sigrist, T. Portmann, C. Laengle, D. Ladle, S. Arber, PLoS Biology 3 (2005) 0878–0890.
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2005 | Conference Paper | IST-REx-ID: 3175
Digital tapestry
C. Rother, S. Kumar, V. Kolmogorov, A. Blake, in:, IEEE, 2005, pp. 589–596.
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2005 | Conference Paper | IST-REx-ID: 3176
Bi-layer segmentation of binocular stereo video
V. Kolmogorov, A. Criminisi, A. Blake, G. Cross, C. Rother, in:, IEEE, 2005, pp. 1186–1186.
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2005 | Conference Paper | IST-REx-ID: 3181
On the optimality of tree reweighted max product message passing
V. Kolmogorov, M. Wainwright, in:, AUAI Press, 2005, pp. 316–323.
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2005 | Conference Paper | IST-REx-ID: 3182 View | DOI
 

2005 | Conference Paper | IST-REx-ID: 3183
Bi-layer segmentation of binocular stereo video
V. Kolmogorov, A. Criminisi, A. Blake, G. Cross, C. Rother, in:, IEEE, 2005, pp. 407–414.
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2005 | Conference Paper | IST-REx-ID: 3211
Improved security analyses for CBC MACs
M. Bellare, K.Z. Pietrzak, P. Rogaway, in:, Springer, 2005, pp. 527–545.
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2005 | Conference Paper | IST-REx-ID: 3212
On the generic insecurity of the full domain hash
Y. Dodis, R. Oliveira, K.Z. Pietrzak, in:, Springer, 2005, pp. 449–466.
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2005 | Conference Paper | IST-REx-ID: 3213
Composition does not imply adaptive security
K.Z. Pietrzak, in:, Springer, 2005, pp. 55–65.
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2005 | Journal Article | IST-REx-ID: 3416 | OA
Complex stability of single proteins explored by forced unfolding experiments
H.L. Janovjak, T. Sapra, D. Mueller, Biophysical Journal 88 (2005) 37–39.
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2005 | Journal Article | IST-REx-ID: 3417
Automated alignment and pattern recognition of single-molecule force spectroscopy data
M. Kuhn, H.L. Janovjak, M. Hubain, D. Mueller, Journal of Microscopy 218 (2005) 125–132.
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2005 | Journal Article | IST-REx-ID: 3418
Hydrodynamic effects in fast AFM single molecule force measurements
H.L. Janovjak, J. Struckmeier, D. Mueller, European Biophysics Journal 34 (2005) 91–96.
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2005 | Journal Article | IST-REx-ID: 3426 | OA
Robust formation of morphogen gradients
M.T. Bollenbach, K. Kruse, P. Pantazis, M. González Gaitán, F. Jülicher, Physical Review Letters 94 (2005).
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