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7346 Publications


2009 | Conference Paper | IST-REx-ID: 4376
Lublinerman, Roberto, Swarat Chaudhuri, and Pavol Cerny. “Parallel Programming with Object Assemblies,” 61–80. ACM, 2009. https://doi.org/1546.
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2009 | Conference Paper | IST-REx-ID: 4377
Hoenicke, Jochen, K Rustan Leino, Andreas Podelski, Martin Schäf, and Thomas Wies. “It’s Doomed; We Can Prove It,” 338–53. Springer, 2009. https://doi.org/1557.
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2009 | Conference Paper | IST-REx-ID: 4383 | OA
Guerraoui, Rachid, Thomas A Henzinger, and Vasu Singh. “Software Transactional Memory on Relaxed Memory Models,” 5643:321–36. Springer, 2009. https://doi.org/10.1007/978-3-642-02658-4_26.
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2009 | Conference Paper | IST-REx-ID: 4385
Dragojevic, Aleksandar, Rachid Guerraoui, Anmol Singh, and Vasu Singh. “Preventing versus Curing: Avoiding Conflicts in Transactional Memories,” 7–16. ACM, 2009. https://doi.org/1533.
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2009 | Conference Paper | IST-REx-ID: 4391
Cerny, Pavol, and Rajeev Alur. “Automated Analysis of Java Methods for Confidentiality,” 173–87. Springer, 2009. https://doi.org/1548.
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2009 | Conference Paper | IST-REx-ID: 4403 | OA
Alur, Rajeev, Pavol Cerny, and Scott Weinstein. “Algorithmic Analysis of Array-Accessing Programs,” 5771:86–101. Springer, 2009. https://doi.org/10.1007/978-3-642-04027-6_9.
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2009 | Journal Article | IST-REx-ID: 11105 | OA
Capelson, Maya, and Martin Hetzer. “The Role of Nuclear Pores in Gene Regulation, Development and Disease.” EMBO Reports. EMBO, 2009. https://doi.org/10.1038/embor.2009.147.
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2009 | Journal Article | IST-REx-ID: 11107 | OA
Dawson, T. Renee, Michelle D. Lazarus, Martin Hetzer, and Susan R. Wente. “ER Membrane–Bending Proteins Are Necessary for de Novo Nuclear Pore Formation.” Journal of Cell Biology. Rockefeller University Press, 2009. https://doi.org/10.1083/jcb.200806174.
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2009 | Journal Article | IST-REx-ID: 11103 | OA
Hetzer, Martin, and Susan R. Wente. “Border Control at the Nucleus: Biogenesis and Organization of the Nuclear Membrane and Pore Complexes.” Developmental Cell. Elsevier, 2009. https://doi.org/10.1016/j.devcel.2009.10.007.
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2009 | Journal Article | IST-REx-ID: 11108 | OA
D’Angelo, Maximiliano A., Marcela Raices, Siler H. Panowski, and Martin Hetzer. “Age-Dependent Deterioration of Nuclear Pore Complexes Causes a Loss of Nuclear Integrity in Postmitotic Cells.” Cell. Elsevier, 2009. https://doi.org/10.1016/j.cell.2008.11.037.
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2009 | Journal Article | IST-REx-ID: 11106 | OA
Anderson, Daniel J., Jesse D. Vargas, Joshua P. Hsiao, and Martin Hetzer. “Recruitment of Functionally Distinct Membrane Proteins to Chromatin Mediates Nuclear Envelope Formation in Vivo.” Journal of Cell Biology. Rockefeller University Press, 2009. https://doi.org/10.1083/jcb.200901106.
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2009 | Conference Paper | IST-REx-ID: 11752
Yang, Xiaodong, Peter S Riseborough, Kimberly A Modic, R A Fisher, C P Oppeil, T R Finlayson, J C Cooley, et al. “Influence of Magnetic Fields on Structural Martensitic Transitions.” In Journal of Physics: Conference Series, Vol. 200. IOP Publishing, 2009. https://doi.org/10.1088/1742-6596/200/3/032062.
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2009 | Journal Article | IST-REx-ID: 7080
Yang, X.-D., P.S. Riseborough, Kimberly A Modic, R.A. Fisher, C.P. Opeil, T.R. Finlayson, J.C. Cooley, et al. “Influence of Magnetic Fields on Structural Martensitic Transitions.” Philosophical Magazine. Taylor & Francis, 2009. https://doi.org/10.1080/14786430902865518.
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2008 | Journal Article | IST-REx-ID: 2795
Hof, Björn, Alberto De Lózar, Dirk Kuik, and Jerry Westerweel. “Repeller or Attractor? Selecting the Dynamical Model for the Onset of Turbulence in Pipe Flow.” Physical Review Letters. American Physical Society, 2008. https://doi.org/10.1103/PhysRevLett.101.214501.
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2008 | Journal Article | IST-REx-ID: 2892
Azevedo, Ricardo, Rolf Lohaus, and Tiago Paixao. “Networking Networks.” Evolution & Development. Wiley-Blackwell, 2008. https://doi.org/10.1111/j.1525-142X.2008.00265.x.
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2008 | Journal Article | IST-REx-ID: 3030
Růčková, Eva, Jiří Friml, Petra Procházková Schrumpfová, and Jiří Fajkus. “Role of Alternative Telomere Lengthening Unmasked in Telomerase Knock-out Mutant Plants.” Plant Molecular Biology. Springer, 2008. https://doi.org/10.1007/s11103-008-9295-7.
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2008 | Journal Article | IST-REx-ID: 3031
Dhonukshe, Pankaj, Ilya Grigoriev, Rainer Fischer, Motoki Tominaga, David Robinson, Jiří Hašek, Tomasz Paciorek, et al. “Auxin Transport Inhibitors Impair Vesicle Motility and Actin Cytoskeleton Dynamics in Diverse Eukaryotes.” PNAS. National Academy of Sciences, 2008. https://doi.org/10.1073/pnas.0711414105.
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2008 | Journal Article | IST-REx-ID: 3032
Kleine Vehn, Jürgen, Pankaj Dhonukshe, Michael Sauer, Philip Brewer, Justyna Wiśniewska, Tomasz Paciorek, Eva Benková, and Jiří Friml. “ARF GEF Dependent Transcytosis and Polar Delivery of PIN Auxin Carriers in Arabidopsis.” Current Biology. Cell Press, 2008. https://doi.org/10.1016/j.cub.2008.03.021.
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2008 | Book Chapter | IST-REx-ID: 3033
Sauer, Michael, and Jiří Friml. “Visualization of Auxin Gradients in Embryogenesis .” In Plant Embryogenesis, edited by María Suárez and Peter Bozhkov, 427:137–44. Humana Press, 2008. https://doi.org/10.1007/978-1-59745-273-1_11.
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2008 | Journal Article | IST-REx-ID: 3034
Friml, Jiří, and Michael Sauer. “Plant Biology: In Their Neighbour’s Shadow.” Nature. Nature Publishing Group, 2008. https://doi.org/10.1038/453298a.
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2008 | Book Chapter | IST-REx-ID: 3035
Sauer, Michael, and Jiří Friml. “In Vitro Culture of Arabidopsis Embryos .” In Plant Embryogenesis, edited by María Suárez and Peter Bozhkov, 427:71–76. Humana Press, 2008. https://doi.org/10.1007/978-1-59745-273-1_5.
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2008 | Journal Article | IST-REx-ID: 3036
Dubrovsky, Joseph, Michael Sauer, Selene Napsucialy Mendivil, Maria Ivanchenko, Jiří Friml, Svetlana Shishkova, John Celenza, and Eva Benková. “Auxin Acts as a Local Morphogenetic Trigger to Specify Lateral Root Founder Cells.” PNAS. National Academy of Sciences, 2008. https://doi.org/10.1073/pnas.0712307105.
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2008 | Journal Article | IST-REx-ID: 3037 | OA
Feraru, Elena, and Jiří Friml. “PIN Polar Targeting.” Plant Physiology. American Society of Plant Biologists, 2008. https://doi.org/10.1104/pp.108.121756.
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2008 | Journal Article | IST-REx-ID: 3038
Swarup K, Benková E, Swarup R, Casimiro I, Péret B, Yang Y, Parry G, Nielsen E, De Smet I, Vanneste S, Levesque M, Carrier D, James N, Calvo V, Ljung K, Kramer E, Roberts R, Graham N, Marillonnet S, Patel K, Jones J, Taylor C, Schachtman D, May S, Sandberg G, Benfey P, Friml J, Kerr I, Beeckman T, Laplaze L, Bennett M. 2008. The auxin influx carrier LAX3 promotes lateral root emergence. Nature Cell Biology. 10(8), 946–954.
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2008 | Journal Article | IST-REx-ID: 3039
De Smet, Ive, Valya Vassileva, Bert De Rybel, Mitchell Levesque, Wim Grunewald, Daniël Van Damme, Giel Van Noorden, et al. “Receptor-like Kinase ACR4 Restricts Formative Cell Divisions in the Arabidopsis Root.” Science. American Association for the Advancement of Science, 2008. https://doi.org/10.1126/science.1160158.
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2008 | Journal Article | IST-REx-ID: 3040
Kleine Vehn, Jürgen, Łukasz Łangowski, Justyna Wiśniewska, Pankaj Dhonukshe, Philip Brewer, and Jiří Friml. “Cellular and Molecular Requirements for Polar PIN Targeting and Transcytosis in Plants.” Molecular Plant. Oxford University Press, 2008. https://doi.org/10.1093/mp/ssn062.
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2008 | Journal Article | IST-REx-ID: 3041
Santelia, Diana, Sina Henrichs, Vincent Vincenzetti, Michael Sauer, Laurent Bigler, Markus Klein, Aurélien Bailly, et al. “Flavonoids Redirect PIN Mediated Polar Auxin Fluxes during Root Gravitropic Responses.” Journal of Biological Chemistry. American Society for Biochemistry and Molecular Biology, 2008. https://doi.org/ 10.1074/jbc.M710122200.
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2008 | Journal Article | IST-REx-ID: 3042
Kleine Vehn, Jürgen, Johannes Leitner, Marta Zwiewka, Michael Sauer, Lindy Abas, Christian Luschnig, and Jiří Friml. “Differential Degradation of PIN2 Auxin Efflux Carrier by Retromer Dependent Vacuolar Targeting.” PNAS. National Academy of Sciences, 2008. https://doi.org/10.1073/pnas.0808073105.
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2008 | Journal Article | IST-REx-ID: 3043
Kleine Vehn, Jürgen, and Jiří Friml. “Polar Targeting and Endocytic Recycling in Auxin-Dependent Plant Development.” Annual Review of Cell and Developmental Biology. Annual Reviews, 2008. https://doi.org/10.1146/annurev.cellbio.24.110707.175254.
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2008 | Journal Article | IST-REx-ID: 3044
Mravec, Jozef, Martin Kubeš, Agnieszka Bielach, Vassilena Gaykova, Jan Petrášek, Petr Skůpa, Suresh Chand, Eva Benková, Eva Zažímalová, and Jiří Friml. “Interaction of PIN and PGP Transport Mechanisms in Auxin Distribution-Dependent Development.” Development. Company of Biologists, 2008. https://doi.org/10.1242/dev.021071.
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2008 | Journal Article | IST-REx-ID: 3045
Dhonukshe, Pankaj, Hirokazu Tanaka, Tatsuaki Goh, Kazuo Ebine, Ari Mähönen, Kalika Prasad, Ikram Blilou, et al. “Generation of Cell Polarity in Plants Links Endocytosis Auxin Distribution and Cell Fate Decisions.” Nature. Nature Publishing Group, 2008. https://doi.org/10.1038/nature07409.
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2008 | Conference Paper | IST-REx-ID: 3194
Kohli, Pushmeet, Alexander Shekhovtsov, Carsten Rother, Vladimir Kolmogorov, and Philip Torr. “On Partial Optimality in Multi Label MRFs,” 480–87. Omnipress, 2008. https://doi.org/10.1145/1390156.1390217.
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2008 | Conference Paper | IST-REx-ID: 3195
Vicente, Sara, Vladimir Kolmogorov, and Carsten Rother. “Graph Cut Based Image Segmentation with Connectivity Priors.” IEEE, 2008. https://doi.org/10.1109/CVPR.2008.4587440.
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2008 | Journal Article | IST-REx-ID: 3196
Szeliski, Richard, Ramin Zabih, Daniel Scharstein, Olga Veksler, Vladimir Kolmogorov, Aseem Agarwala, Marshall Tappen, and Carsten Rother. “A Comparative Study of Energy Minimization Methods for Markov Random Fields with Smoothness-Based Priors.” IEEE Transactions on Pattern Analysis and Machine Intelligence. IEEE, 2008. https://doi.org/10.1109/TPAMI.2007.70844.
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2008 | Conference Paper | IST-REx-ID: 3198
Torresani, Lorenzo, Vladimir Kolmogorov, and Carsten Rother. “Feature Correspondence via Graph Matching: Models and Global Optimization,” 5303:596–609. Springer, 2008. https://doi.org/10.1007/978-3-540-88688-4_44.
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2008 | Conference Paper | IST-REx-ID: 3224
Dodis, Yevgeniy, Krzysztof Z Pietrzak, and Prashant Puniya. “A New Mode of Operation for Block Ciphers and Length Preserving MACs,” 4965:198–219. Springer, 2008. https://doi.org/10.1007/978-3-540-78967-3_12.
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2008 | Conference Paper | IST-REx-ID: 3225
Fischlin, Marc, Anja Lehmann, and Krzysztof Z Pietrzak. “Robust Multi Property Combiners for Hash Functions Revisited,” 5126:655–66. Springer, 2008. https://doi.org/10.1007/978-3-540-70583-3_53.
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2008 | Conference Paper | IST-REx-ID: 3226
Pietrzak, Krzysztof Z, and Johan Sjödin. “Weak Pseudorandom Functions in Minicrypt,” 5126:423–36. Springer, 2008. https://doi.org/10.1007/978-3-540-70583-3_35.
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2008 | Journal Article | IST-REx-ID: 3227
Zubielik, Piotr, Jerzy Nadaczny, Krzysztof Z Pietrzak, and Marcin Lawenda. “Elektrowiz – System of Measurement Data Management.” Przeglad Elektrotechniczny. SIGMA-NOT, 2008.
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2008 | Conference Paper | IST-REx-ID: 3228
Pietrzak, Krzysztof Z. “Compression from Collisions or Why CRHF Combiners Have a Long Output,” 5157:413–32. Springer, 2008. https://doi.org/10.1007/978-3-540-85174-5_23.
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2008 | Conference Paper | IST-REx-ID: 3229
Dziembowski, Stefan, and Krzysztof Z Pietrzak. “Leakage Resilient Cryptography,” 293–302. IEEE, 2008. https://doi.org/10.1109/FOCS.2008.56.
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2008 | Journal Article | IST-REx-ID: 3291
Schmalhorst, Philipp S, Sven Krappmann, Wouter Vervecken, Manfred Rohde, Meike Müller, Gerhard Braus, Roland Contreras, Armin Braun, Hans Bakker, and Françoise Routier. “Contribution of Galactofuranose to the Virulence of the Opportunistic Pathogen Aspergillus Fumigatus.” Eukaryotic Cell. American Society for Microbiology, 2008. https://doi.org/10.1128/EC.00065-08.
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2008 | Journal Article | IST-REx-ID: 3307 | OA
Green R, Malaspinas A, Krause J, Briggs A, Johnson P, Uhler C, Meyer M, Good J, Maricic T, Stenzel U, Prüfer K, Siebauer M, Burbano H, Ronan M, Rothberg J, Egholm M, Rudan P, Brajković D, Kućan Ž, Gušić I, Wikström M, Laakkonen L, Kelso J, Slatkin M, Pääbo S. 2008. A complete neandertal mitochondrial genome sequence determined by highhhroughput sequencing. Cell. 134, 416–426.
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2008 | Journal Article | IST-REx-ID: 3409
Struckmeier, Jens, Reiner Wahl, Mirko Leuschner, Joao Nunes, Harald L Janovjak, Ulrich Geisler, Gerd Hofmann, Torsten Jähnke, and Daniel Mueller. “Fully Automated Single-Molecule Force Spectroscopy for Screening Applications.” Nanotechnology. IOP Publishing Ltd., 2008. https://doi.org/10.1088/0957-4484/19/38/384020.
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2008 | Book Review | IST-REx-ID: 3410
Janovjak, Harald L, Tanuj Sapra, Alexej Kedrov, and Daniel Mueller. “From Valleys to Ridges: Exploring the Energy Landscape of Single Membrane Proteins.” ChemPhysChem. Wiley-Blackwell, 2008. https://doi.org/10.1002/cphc.200700662.
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2008 | Journal Article | IST-REx-ID: 844
Schmidt, Steffen, Anna Gerasimova, Fyodor Kondrashov, Ivan Adzuhbei, Alexey Kondrashov, and Shamil Sunyaev. “Hypermutable Non-Synonymous Sites Are under Stronger Negative Selection.” PLoS Genetics. Public Library of Science, 2008. https://doi.org/10.1371/journal.pgen.1000281.
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2008 | Journal Article | IST-REx-ID: 8480
Schanda, Paul, Bernhard Brutscher, Robert Konrat, and Martin Tollinger. “Folding of the KIX Domain: Characterization of the Equilibrium Analog of a Folding Intermediate Using 15N/13C Relaxation Dispersion and Fast 1H/2H Amide Exchange NMR Spectroscopy.” Journal of Molecular Biology. Elsevier, 2008. https://doi.org/10.1016/j.jmb.2008.05.040.
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2008 | Journal Article | IST-REx-ID: 8481
Bersch, Beate, Adrien Favier, Paul Schanda, Sébastien van Aelst, Tatiana Vallaeys, Jacques Covès, Max Mergeay, and Ruddy Wattiez. “Molecular Structure and Metal-Binding Properties of the Periplasmic CopK Protein Expressed in Cupriavidus Metallidurans CH34 during Copper Challenge.” Journal of Molecular Biology. Elsevier, 2008. https://doi.org/10.1016/j.jmb.2008.05.017.
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2008 | Journal Article | IST-REx-ID: 8482
Kern, Thomas, Paul Schanda, and Bernhard Brutscher. “Sensitivity-Enhanced IPAP-SOFAST-HMQC for Fast-Pulsing 2D NMR with Reduced Radiofrequency Load.” Journal of Magnetic Resonance. Elsevier, 2008. https://doi.org/10.1016/j.jmr.2007.11.015.
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2008 | Journal Article | IST-REx-ID: 8509
Kaloshin, Vadim, and Mark Levi. “Geometry of Arnold Diffusion.” SIAM Review. Society for Industrial & Applied Mathematics, 2008. https://doi.org/10.1137/070703235.
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