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7346 Publications


2009 | Conference Paper | IST-REx-ID: 4376
Lublinerman R, Chaudhuri S, Cerny P. Parallel programming with object assemblies. In: ACM; 2009:61-80. doi:1546
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2009 | Conference Paper | IST-REx-ID: 4377
Hoenicke J, Leino KR, Podelski A, Schäf M, Wies T. It’s Doomed; We Can Prove It. In: Springer; 2009:338-353. doi:1557
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2009 | Conference Paper | IST-REx-ID: 4383 | OA
Guerraoui R, Henzinger TA, Singh V. Software transactional memory on relaxed memory models. In: Vol 5643. Springer; 2009:321-336. doi:10.1007/978-3-642-02658-4_26
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2009 | Conference Paper | IST-REx-ID: 4385
Dragojevic A, Guerraoui R, Singh A, Singh V. Preventing versus curing: avoiding conflicts in transactional memories. In: ACM; 2009:7-16. doi:1533
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2009 | Conference Paper | IST-REx-ID: 4391
Cerny P, Alur R. Automated Analysis of Java Methods for Confidentiality. In: Springer; 2009:173-187. doi:1548
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2009 | Conference Paper | IST-REx-ID: 4403 | OA
Alur R, Cerny P, Weinstein S. Algorithmic analysis of array-accessing programs. In: Vol 5771. Springer; 2009:86-101. doi:10.1007/978-3-642-04027-6_9
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2009 | Journal Article | IST-REx-ID: 11105 | OA
Capelson M, Hetzer M. The role of nuclear pores in gene regulation, development and disease. EMBO reports. 2009;10(7):697-705. doi:10.1038/embor.2009.147
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2009 | Journal Article | IST-REx-ID: 11107 | OA
Dawson TR, Lazarus MD, Hetzer M, Wente SR. ER membrane–bending proteins are necessary for de novo nuclear pore formation. Journal of Cell Biology. 2009;184(5):659-675. doi:10.1083/jcb.200806174
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2009 | Journal Article | IST-REx-ID: 11103 | OA
Hetzer M, Wente SR. Border control at the nucleus: Biogenesis and organization of the nuclear membrane and pore complexes. Developmental Cell. 2009;17(5):606-616. doi:10.1016/j.devcel.2009.10.007
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2009 | Journal Article | IST-REx-ID: 11108 | OA
D’Angelo MA, Raices M, Panowski SH, Hetzer M. Age-dependent deterioration of nuclear pore complexes causes a loss of nuclear integrity in postmitotic cells. Cell. 2009;136(2):284-295. doi:10.1016/j.cell.2008.11.037
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2009 | Journal Article | IST-REx-ID: 11106 | OA
Anderson DJ, Vargas JD, Hsiao JP, Hetzer M. Recruitment of functionally distinct membrane proteins to chromatin mediates nuclear envelope formation in vivo. Journal of Cell Biology. 2009;186(2):183-191. doi:10.1083/jcb.200901106
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2009 | Conference Paper | IST-REx-ID: 11752
Yang X, Riseborough PS, Modic KA, et al. Influence of magnetic fields on structural martensitic transitions. In: Journal of Physics: Conference Series. Vol 200. IOP Publishing; 2009. doi:10.1088/1742-6596/200/3/032062
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2009 | Journal Article | IST-REx-ID: 7080
Yang X-D, Riseborough PS, Modic KA, et al. Influence of magnetic fields on structural martensitic transitions. Philosophical Magazine. 2009;89(22-24):2083-2091. doi:10.1080/14786430902865518
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2008 | Journal Article | IST-REx-ID: 2795
Hof B, De Lózar A, Kuik D, Westerweel J. Repeller or attractor? Selecting the dynamical model for the onset of turbulence in pipe flow. Physical Review Letters. 2008;101(21). doi:10.1103/PhysRevLett.101.214501
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2008 | Journal Article | IST-REx-ID: 2892
Azevedo R, Lohaus R, Paixao T. Networking networks. Evolution & Development. 2008;10(5):514-515. doi:10.1111/j.1525-142X.2008.00265.x
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2008 | Journal Article | IST-REx-ID: 3030
Růčková E, Friml J, Procházková Schrumpfová P, Fajkus J. Role of alternative telomere lengthening unmasked in telomerase knock-out mutant plants. Plant Molecular Biology. 2008;66(6):637-646. doi:10.1007/s11103-008-9295-7
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2008 | Journal Article | IST-REx-ID: 3031
Dhonukshe P, Grigoriev I, Fischer R, et al. Auxin transport inhibitors impair vesicle motility and actin cytoskeleton dynamics in diverse eukaryotes. PNAS. 2008;105(11):4489-4494. doi:10.1073/pnas.0711414105
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2008 | Journal Article | IST-REx-ID: 3032
Kleine Vehn J, Dhonukshe P, Sauer M, et al. ARF GEF dependent transcytosis and polar delivery of PIN auxin carriers in Arabidopsis. Current Biology. 2008;18(7):526-531. doi:10.1016/j.cub.2008.03.021
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2008 | Book Chapter | IST-REx-ID: 3033
Sauer M, Friml J. Visualization of auxin gradients in embryogenesis . In: Suárez M, Bozhkov P, eds. Plant Embryogenesis. Vol 427. Humana Press; 2008:137-144. doi:10.1007/978-1-59745-273-1_11
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2008 | Journal Article | IST-REx-ID: 3034
Friml J, Sauer M. Plant biology: In their neighbour’s shadow. Nature. 2008;453(7193):298-299. doi:10.1038/453298a
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2008 | Book Chapter | IST-REx-ID: 3035
Sauer M, Friml J. In vitro culture of Arabidopsis embryos . In: Suárez M, Bozhkov P, eds. Plant Embryogenesis. Vol 427. Humana Press; 2008:71-76. doi:10.1007/978-1-59745-273-1_5
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2008 | Journal Article | IST-REx-ID: 3036
Dubrovsky J, Sauer M, Napsucialy Mendivil S, et al. Auxin acts as a local morphogenetic trigger to specify lateral root founder cells. PNAS. 2008;105(25):8790-8794. doi:10.1073/pnas.0712307105
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2008 | Journal Article | IST-REx-ID: 3037 | OA
Feraru E, Friml J. PIN polar targeting. Plant Physiology. 2008;147(4):1553-1559. doi:10.1104/pp.108.121756
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2008 | Journal Article | IST-REx-ID: 3038
Swarup K, Benková E, Swarup R, Casimiro I, Péret B, Yang Y, Parry G, Nielsen E, De Smet I, Vanneste S, Levesque M, Carrier D, James N, Calvo V, Ljung K, Kramer E, Roberts R, Graham N, Marillonnet S, Patel K, Jones J, Taylor C, Schachtman D, May S, Sandberg G, Benfey P, Friml J, Kerr I, Beeckman T, Laplaze L, Bennett M. 2008. The auxin influx carrier LAX3 promotes lateral root emergence. Nature Cell Biology. 10(8), 946–954.
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2008 | Journal Article | IST-REx-ID: 3039
De Smet I, Vassileva V, De Rybel B, et al. Receptor-like kinase ACR4 restricts formative cell divisions in the Arabidopsis root. Science. 2008;322(5901):594-597. doi:10.1126/science.1160158
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2008 | Journal Article | IST-REx-ID: 3040
Kleine Vehn J, Łangowski Ł, Wiśniewska J, Dhonukshe P, Brewer P, Friml J. Cellular and molecular requirements for polar PIN targeting and transcytosis in plants. Molecular Plant. 2008;1(6):1056-1066. doi:10.1093/mp/ssn062
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2008 | Journal Article | IST-REx-ID: 3041
Santelia D, Henrichs S, Vincenzetti V, et al. Flavonoids redirect PIN mediated polar auxin fluxes during root gravitropic responses. Journal of Biological Chemistry. 2008;283(45):31218-31226. doi: 10.1074/jbc.M710122200
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2008 | Journal Article | IST-REx-ID: 3042
Kleine Vehn J, Leitner J, Zwiewka M, et al. Differential degradation of PIN2 auxin efflux carrier by retromer dependent vacuolar targeting. PNAS. 2008;105(46):17812-17817. doi:10.1073/pnas.0808073105
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2008 | Journal Article | IST-REx-ID: 3043
Kleine Vehn J, Friml J. Polar targeting and endocytic recycling in auxin-dependent plant development. Annual Review of Cell and Developmental Biology. 2008;24:447-473. doi:10.1146/annurev.cellbio.24.110707.175254
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2008 | Journal Article | IST-REx-ID: 3044
Mravec J, Kubeš M, Bielach A, et al. Interaction of PIN and PGP transport mechanisms in auxin distribution-dependent development. Development. 2008;135(20):3345-3354. doi:10.1242/dev.021071
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2008 | Journal Article | IST-REx-ID: 3045
Dhonukshe P, Tanaka H, Goh T, et al. Generation of cell polarity in plants links endocytosis auxin distribution and cell fate decisions. Nature. 2008;456(7224):962-966. doi:10.1038/nature07409
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2008 | Conference Paper | IST-REx-ID: 3194
Kohli P, Shekhovtsov A, Rother C, Kolmogorov V, Torr P. On partial optimality in multi label MRFs. In: Omnipress; 2008:480-487. doi:10.1145/1390156.1390217
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2008 | Conference Paper | IST-REx-ID: 3195
Vicente S, Kolmogorov V, Rother C. Graph cut based image segmentation with connectivity priors. In: IEEE; 2008. doi:10.1109/CVPR.2008.4587440
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2008 | Journal Article | IST-REx-ID: 3196
Szeliski R, Zabih R, Scharstein D, et al. A comparative study of energy minimization methods for Markov random fields with smoothness-based priors. IEEE Transactions on Pattern Analysis and Machine Intelligence. 2008;30(6):1068-1080. doi:10.1109/TPAMI.2007.70844
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2008 | Conference Paper | IST-REx-ID: 3198
Torresani L, Kolmogorov V, Rother C. Feature correspondence via graph matching: Models and global optimization. In: Vol 5303. Springer; 2008:596-609. doi:10.1007/978-3-540-88688-4_44
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2008 | Conference Paper | IST-REx-ID: 3224
Dodis Y, Pietrzak KZ, Puniya P. A new mode of operation for block ciphers and length preserving MACs. In: Vol 4965. Springer; 2008:198-219. doi:10.1007/978-3-540-78967-3_12
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2008 | Conference Paper | IST-REx-ID: 3225
Fischlin M, Lehmann A, Pietrzak KZ. Robust multi property combiners for hash functions revisited. In: Vol 5126. Springer; 2008:655-666. doi:10.1007/978-3-540-70583-3_53
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2008 | Conference Paper | IST-REx-ID: 3226
Pietrzak KZ, Sjödin J. Weak pseudorandom functions in minicrypt. In: Vol 5126. Springer; 2008:423-436. doi:10.1007/978-3-540-70583-3_35
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2008 | Journal Article | IST-REx-ID: 3227
Zubielik P, Nadaczny J, Pietrzak KZ, Lawenda M. Elektrowiz – system of measurement data management. Przeglad Elektrotechniczny. 2008;84(10):239-242.
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2008 | Conference Paper | IST-REx-ID: 3228
Pietrzak KZ. Compression from collisions or why CRHF combiners have a long output. In: Vol 5157. Springer; 2008:413-432. doi:10.1007/978-3-540-85174-5_23
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2008 | Conference Paper | IST-REx-ID: 3229
Dziembowski S, Pietrzak KZ. Leakage resilient cryptography. In: IEEE; 2008:293-302. doi:10.1109/FOCS.2008.56
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2008 | Journal Article | IST-REx-ID: 3291
Schmalhorst PS, Krappmann S, Vervecken W, et al. Contribution of galactofuranose to the virulence of the opportunistic pathogen Aspergillus fumigatus. Eukaryotic Cell. 2008;7(8):1268-1277. doi:10.1128/EC.00065-08
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2008 | Journal Article | IST-REx-ID: 3307 | OA
Green R, Malaspinas A, Krause J, Briggs A, Johnson P, Uhler C, Meyer M, Good J, Maricic T, Stenzel U, Prüfer K, Siebauer M, Burbano H, Ronan M, Rothberg J, Egholm M, Rudan P, Brajković D, Kućan Ž, Gušić I, Wikström M, Laakkonen L, Kelso J, Slatkin M, Pääbo S. 2008. A complete neandertal mitochondrial genome sequence determined by highhhroughput sequencing. Cell. 134, 416–426.
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2008 | Journal Article | IST-REx-ID: 3409
Struckmeier J, Wahl R, Leuschner M, et al. Fully automated single-molecule force spectroscopy for screening applications. Nanotechnology. 2008;19(38). doi:10.1088/0957-4484/19/38/384020
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2008 | Book Review | IST-REx-ID: 3410
Janovjak HL, Sapra T, Kedrov A, Mueller D. From valleys to ridges: Exploring the energy landscape of single membrane proteins. ChemPhysChem. 2008;9(7):954-966. doi:10.1002/cphc.200700662
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2008 | Journal Article | IST-REx-ID: 844
Schmidt S, Gerasimova A, Kondrashov F, Adzuhbei I, Kondrashov A, Sunyaev S. Hypermutable non-synonymous sites are under stronger negative selection. PLoS Genetics. 2008;4(11). doi:10.1371/journal.pgen.1000281
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2008 | Journal Article | IST-REx-ID: 8480
Schanda P, Brutscher B, Konrat R, Tollinger M. Folding of the KIX domain: Characterization of the equilibrium analog of a folding intermediate using 15N/13C relaxation dispersion and fast 1H/2H amide exchange NMR spectroscopy. Journal of Molecular Biology. 2008;380(4):726-741. doi:10.1016/j.jmb.2008.05.040
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2008 | Journal Article | IST-REx-ID: 8481
Bersch B, Favier A, Schanda P, et al. Molecular structure and metal-binding properties of the periplasmic CopK protein expressed in Cupriavidus metallidurans CH34 during copper challenge. Journal of Molecular Biology. 2008;380(2):386-403. doi:10.1016/j.jmb.2008.05.017
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2008 | Journal Article | IST-REx-ID: 8482
Kern T, Schanda P, Brutscher B. Sensitivity-enhanced IPAP-SOFAST-HMQC for fast-pulsing 2D NMR with reduced radiofrequency load. Journal of Magnetic Resonance. 2008;190(2):333-338. doi:10.1016/j.jmr.2007.11.015
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2008 | Journal Article | IST-REx-ID: 8509
Kaloshin V, Levi M. Geometry of Arnold diffusion. SIAM Review. 2008;50(4):702-720. doi:10.1137/070703235
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