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8978 Publications


2014 | Book Chapter | IST-REx-ID: 7743
M. R. Robinson and A. Qvarnström, “Influence of the environment on the genetic architecture of traits involved in sexual selection within wild populations,” in Genotype-by-Environment Interactions and Sexual Selection, J. Hunt and D. Hosken, Eds. Chichester, UK: Wiley, 2014, pp. 137–168.
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2014 | Journal Article | IST-REx-ID: 7744
M. R. Robinson, N. R. Wray, and P. M. Visscher, “Explaining additional genetic variation in complex traits,” Trends in Genetics, vol. 30, no. 4. Elsevier, pp. 124–132, 2014.
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2014 | Journal Article | IST-REx-ID: 7768
M. A. Lohr et al., “Vibrational and structural signatures of the crossover between dense glassy and sparse gel-like attractive colloidal packings,” Physical Review E, vol. 90, no. 6. American Physical Society, 2014.
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2014 | Journal Article | IST-REx-ID: 7771 | OA
C. P. Goodrich, A. J. Liu, and S. R. Nagel, “Comment on ‘Repulsive contact interactions make jammed particulate systems inherently nonharmonic,’” Physical Review Letters, vol. 112, no. 4. American Physical Society, 2014.
[Preprint] View | DOI | Download Preprint (ext.) | arXiv
 

2014 | Journal Article | IST-REx-ID: 7772
T. Still et al., “Phonon dispersion and elastic moduli of two-dimensional disordered colloidal packings of soft particles with frictional interactions,” Physical Review E, vol. 89, no. 1. American Physical Society, 2014.
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2014 | Journal Article | IST-REx-ID: 7773
C. P. Goodrich, A. J. Liu, and S. R. Nagel, “Solids between the mechanical extremes of order and disorder,” Nature Physics, vol. 10, no. 8. Springer Nature, pp. 578–581, 2014.
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2014 | Journal Article | IST-REx-ID: 7769
C. P. Goodrich, S. Dagois-Bohy, B. P. Tighe, M. van Hecke, A. J. Liu, and S. R. Nagel, “Jamming in finite systems: Stability, anisotropy, fluctuations, and scaling,” Physical Review E, vol. 90, no. 2. American Physical Society, 2014.
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2014 | Journal Article | IST-REx-ID: 7770
C. P. Goodrich, A. J. Liu, and S. R. Nagel, “Contact nonlinearities and linear response in jammed particulate packings,” Physical Review E, vol. 90, no. 2. American Physical Society, 2014.
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2014 | Journal Article | IST-REx-ID: 8021 | OA
R. Araya, T. P. Vogels, and R. Yuste, “Activity-dependent dendritic spine neck changes are correlated with synaptic strength,” Proceedings of the National Academy of Sciences, vol. 111, no. 28. Proceedings of the National Academy of Sciences, pp. E2895–E2904, 2014.
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2014 | Journal Article | IST-REx-ID: 8023 | OA
C. Tomm, M. Avermann, C. Petersen, W. Gerstner, and T. P. Vogels, “Connection-type-specific biases make uniform random network models consistent with cortical recordings,” Journal of Neurophysiology, vol. 112, no. 8. American Physiological Society, pp. 1801–1814, 2014.
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2014 | Journal Article | IST-REx-ID: 8022 | OA
G. Hennequin, T. P. Vogels, and W. Gerstner, “Optimal control of transient dynamics in balanced networks supports generation of complex movements,” Neuron, vol. 82, no. 6. Elsevier, pp. 1394–1406, 2014.
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2014 | Journal Article | IST-REx-ID: 809
T. Bharata et al., “Cryo electron microscopy of tubular arrays of HIV-1 Gag resolves structures essential for immature virus assembly,” PNAS, vol. 111, no. 22. National Academy of Sciences, pp. 8233–8238, 2014.
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2014 | Journal Article | IST-REx-ID: 8244
J. Singer et al., “Generation of a canine anti-EGFR (ErbB-1) antibody for passive immunotherapy in dog cancer patients,” Molecular Cancer Therapeutics, vol. 13, no. 7. American Association for Cancer Research, pp. 1777–1790, 2014.
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2014 | Journal Article | IST-REx-ID: 8459
S. Morin et al., “Relax: The analysis of biomolecular kinetics and thermodynamics using NMR relaxation dispersion data,” Bioinformatics, vol. 30, no. 15. Oxford University Press, pp. 2219–2220, 2014.
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2014 | Journal Article | IST-REx-ID: 8458
P. Schanda et al., “Atomic model of a cell-wall cross-linking enzyme in complex with an intact bacterial peptidoglycan,” Journal of the American Chemical Society, vol. 136, no. 51. American Chemical Society, pp. 17852–17860, 2014.
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2014 | Journal Article | IST-REx-ID: 8460
P. Ma et al., “Probing transient conformational states of proteins by solid-state R1ρ relaxation-dispersion NMR spectroscopy,” Angewandte Chemie International Edition, vol. 53, no. 17. Wiley, pp. 4312–4317, 2014.
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2014 | Journal Article | IST-REx-ID: 8501
A. Bounemoura and V. Kaloshin, “Generic fast diffusion for a class of non-convex Hamiltonians with two degrees of freedom,” Moscow Mathematical Journal, vol. 14, no. 2. Independent University of Moscow, pp. 181–203, 2014.
[Preprint] View | DOI | arXiv
 

2014 | Journal Article | IST-REx-ID: 8500
V. Kaloshin, M. Levi, and M. Saprykina, “Arnol′d diffusion in a pendulum lattice,” Communications on Pure and Applied Mathematics, vol. 67, no. 5. Wiley, pp. 748–775, 2014.
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2014 | Journal Article | IST-REx-ID: 852
O. Rosello and F. Kondrashov, “Long-Term asymmetrical acceleration of protein evolution after gene duplication,” Genome Biology and Evolution, vol. 6, no. 8. Oxford University Press, pp. 1949–1955, 2014.
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2014 | Journal Article | IST-REx-ID: 856
K. Pougach et al., “Duplication of a promiscuous transcription factor drives the emergence of a new regulatory network,” Nature Communications, vol. 5. Nature Publishing Group, 2014.
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2014 | Journal Article | IST-REx-ID: 863
Moroz L, Kocot K, Citarella M, Dosung S, Norekian T, Povolotskaya I, Grigorenko A, Dailey C, Berezikov E, Buckley K, Ptitsyn A, Reshetov D, Mukherjee K, Moroz T, Bobkova Y, Yu F, Kapitonov V, Jurka J, Bobkov Y, Swore J, Girardo D, Fodor A, Gusev F, Sanford R, Bruders R, Kittler E, Mills C, Rast J, Derelle R, Solovyev V, Kondrashov F, Swalla B, Sweedler J, Rogaev E, Halanych K, Kohn A. 2014. The ctenophore genome and the evolutionary origins of neural systems. Nature. 510(7503), 109–114.
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2014 | Journal Article | IST-REx-ID: 865
A. Koval et al., “Anti leprosy drug clofazimine inhibits growth of triple-negative breast cancer cells via inhibition of canonical Wnt signaling,” Biochemical Pharmacology, vol. 87, no. 4. Elsevier, pp. 571–578, 2014.
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2014 | Journal Article | IST-REx-ID: 925
B. Dong, E. B. Hannezo, and S. Hayashi, “Balance between apical membrane growth and luminal matrix resistance determines epithelial tubule shape,” Cell Reports, vol. 7, no. 4. Cell Press, pp. 941–950, 2014.
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2014 | Journal Article | IST-REx-ID: 927
E. B. Hannezo, J. Prost, and J. Joanny, “Theory of epithelial sheet morphology in three dimensions,” PNAS, vol. 111, no. 1. National Academy of Sciences, pp. 27–32, 2014.
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2014 | Journal Article | IST-REx-ID: 9519
M. Y. Kim and D. Zilberman, “DNA methylation as a system of plant genomic immunity,” Trends in Plant Science, vol. 19, no. 5. Elsevier, pp. 320–326, 2014.
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2014 | Journal Article | IST-REx-ID: 96 | OA
A. P. Higginbotham, F. Kuemmeth, M. Hanson, A. Gossard, and C. Marcus, “Coherent operations and screening in multielectron spin qubits,” APS Physics, Physical Review Letters, vol. 112, no. 2. American Physiological Society, 2014.
[Preprint] View | DOI | Download Preprint (ext.) | arXiv
 

2014 | Journal Article | IST-REx-ID: 9594 | OA
C. Greenhill, M. A. Kwan, and D. Wind, “On the number of spanning trees in random regular graphs,” The Electronic Journal of Combinatorics, vol. 21, no. 1. The Electronic Journal of Combinatorics, 2014.
[Published Version] View | DOI | Download Published Version (ext.) | arXiv
 

2014 | Journal Article | IST-REx-ID: 9655 | OA
M. Perkovic et al., “Correlative light- and electron microscopy with chemical tags,” Journal of Structural Biology, vol. 186, no. 2. Elsevier, pp. 205–213, 2014.
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2014 | Journal Article | IST-REx-ID: 9686
B. Cheng, H. S. Leung, and A. H. W. Ngan, “Strength of metals under vibrations – dislocation-density-function dynamics simulations,” Philosophical Magazine, vol. 95, no. 16–18. Taylor & Francis, pp. 1845–1865, 2014.
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2014 | Journal Article | IST-REx-ID: 2083 | OA
M. Lagator, A. Morgan, P. Neve, and N. Colegrave, “Role of sex and migration in adaptation to sink environments,” Evolution, vol. 68, no. 8. Wiley, pp. 2296–2305, 2014.
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2014 | Research Data Reference | IST-REx-ID: 9747 | OA
M. Lagator, A. Morgan, P. Neve, and N. Colegrave, “Data from: Role of sex and migration in adaptation to sink environments.” Dryad, 2014.
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2014 | Journal Article | IST-REx-ID: 977 | OA
M. Serbyn et al., “Interferometric probes of many-body localization,” Physical Review Letters, vol. 113, no. 14. American Physical Society, 2014.
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2014 | Journal Article | IST-REx-ID: 980 | OA
M. Serbyn, Z. Papić, and D. Abanin, “Quantum quenches in the many-body localized phase,” Physical Review B - Condensed Matter and Materials Physics, vol. 90, no. 17. American Physical Society, 2014.
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2014 | Journal Article | IST-REx-ID: 98 | OA
A. P. Higginbotham et al., “Hole spin coherence in a Ge/Si heterostructure nanowire,” Nano Letters, vol. 14, no. 6. American Chemical Society, pp. 3582–3586, 2014.
[Preprint] View | DOI | Download Preprint (ext.) | arXiv
 

2014 | Journal Article | IST-REx-ID: 2086 | OA
S. Wolf et al., “So near and yet so far: Harmonic radar reveals reduced homing ability of Nosema infected honeybees,” PLoS One, vol. 9, no. 8. Public Library of Science, 2014.
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2014 | Research Data Reference | IST-REx-ID: 9888
S. Wolf et al., “Supporting information.” Public Library of Science, 2014.
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2014 | Journal Article | IST-REx-ID: 845
V. Seplyarskiy et al., “Crossing-over in a hypervariable species preferentially occurs in regions of high local similarity,” Molecular Biology and Evolution, vol. 31, no. 11. Oxford University Press, pp. 3016–3025, 2014.
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2014 | Journal Article | IST-REx-ID: 892
D. Ivankov, A. Finkelstein, and F. Kondrashov, “A structural perspective of compensatory evolution,” Current Opinion in Structural Biology, vol. 26, no. 1. Elsevier, pp. 104–112, 2014.
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2014 | Journal Article | IST-REx-ID: 9050 | OA
D. Takagi, J. A. Palacci, A. B. Braunschweig, M. J. Shelley, and J. Zhang, “Hydrodynamic capture of microswimmers into sphere-bound orbits,” Soft Matter, vol. 10, no. 11. Royal Society of Chemistry , 2014.
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2014 | Journal Article | IST-REx-ID: 9166 | OA
J. A. Palacci, S. Sacanna, S.-H. Kim, G.-R. Yi, D. J. Pine, and P. M. Chaikin, “Light-activated self-propelled colloids,” Philosophical Transactions of the Royal Society A: Mathematical, Physical and Engineering Sciences, vol. 372, no. 2029. The Royal Society, 2014.
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2014 | Journal Article | IST-REx-ID: 926
E. B. Hannezo, J. Prost, and J. Joanny, “Growth homeostatic regulation and stem cell dynamics in tissues,” Journal of the Royal Society Interface, vol. 11, no. 93. Royal Society of London, 2014.
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2014 | Journal Article | IST-REx-ID: 9458 | OA
J. T. Huff and D. Zilberman, “Dnmt1-independent CG methylation contributes to nucleosome positioning in diverse eukaryotes,” Cell, vol. 156, no. 6. Elsevier, pp. 1286–1297, 2014.
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2014 | Journal Article | IST-REx-ID: 9479 | OA
Z. Mérai et al., “The AAA-ATPase molecular chaperone Cdc48/p97 disassembles sumoylated centromeres, decondenses heterochromatin, and activates ribosomal RNA genes,” Proceedings of the National Academy of Sciences, vol. 111, no. 45. National Academy of Sciences, pp. 16166–16171, 2014.
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2014 | Journal Article | IST-REx-ID: 9662 | OA
B. Cheng and M. Ceriotti, “Direct path integral estimators for isotope fractionation ratios,” The Journal of Chemical Physics, vol. 141, no. 24. AIP Publishing, 2014.
[Preprint] View | DOI | Download Preprint (ext.) | PubMed | Europe PMC | arXiv
 

2014 | Journal Article | IST-REx-ID: 97 | OA
A. P. Higginbotham et al., “Antilocalization of coulomb blockade in a Ge/Si nanowire,” APS Physics, Physical Review Letters, vol. 112, no. 21. American Physical Society, 2014.
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2014 | Journal Article | IST-REx-ID: 2004 | OA
A. Lovrics et al., “Boolean modelling reveals new regulatory connections between transcription factors orchestrating the development of the ventral spinal cord,” PLoS One, vol. 9, no. 11. Public Library of Science, 2014.
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2014 | Research Data Reference | IST-REx-ID: 9722
A. Lovrics et al., “Transition probability between TF expression states when Dbx2 inhibits Nkx2.2.” Public Library of Science, 2014.
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2014 | Journal Article | IST-REx-ID: 2039 | OA
K. Chatterjee, A. Pavlogiannis, B. Adlam, and M. Nowak, “The time scale of evolutionary innovation,” PLoS Computational Biology, vol. 10, no. 9. Public Library of Science, 2014.
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2014 | Journal Article | IST-REx-ID: 2161
C. Westhus, L. V. Ugelvig, E. Tourdot, J. Heinze, C. Doums, and S. Cremer, “Increased grooming after repeated brood care provides sanitary benefits in a clonal ant,” Behavioral Ecology and Sociobiology, vol. 68, no. 10. Springer, pp. 1701–1710, 2014.
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2014 | Journal Article | IST-REx-ID: 2036 | OA
M. Lagator, N. Colegrave, and P. Neve, “Selection history and epistatic interactions impact dynamics of adaptation to novel environmental stresses,” Proceedings of the Royal Society of London Series B Biological Sciences, vol. 281, no. 1794. Royal Society, The, 2014.
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