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6306 Publications


2004 | Journal Article | IST-REx-ID: 2787
B. Hof, A. Juel, L. Zhao, D. Henry, H. Ben Hadid, and T. Mullin, “On the onset of oscillatory convection in molten gallium,” Journal of Fluid Mechanics, vol. 515. Cambridge University Press, pp. 391–413, 2004.
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2004 | Journal Article | IST-REx-ID: 8517
D. Dolgopyat, V. Kaloshin, and L. Koralov, “A limit shape theorem for periodic stochastic dispersion,” Communications on Pure and Applied Mathematics, vol. 57, no. 9. Wiley, pp. 1127–1158, 2004.
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2004 | Journal Article | IST-REx-ID: 8518
L. Koralov, V. Kaloshin, and D. Dolgopyat, “Sample path properties of the stochastic flows,” The Annals of Probability, vol. 32, no. 1A. Institute of Mathematical Statistics, pp. 1–27, 2004.
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2004 | Journal Article | IST-REx-ID: 864
A. Panchenko, F. Kondrashov, and S. Bryant, “Prediction of functional sites by analysis of sequence and structure conservation,” Protein Science, vol. 13, no. 4. Wiley-Blackwell, pp. 884–892, 2004.
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2004 | Journal Article | IST-REx-ID: 870
F. Kondrashov, A. Ogurtsov, and A. Kondrashov, “Bioinformatical assay of human gene morbidity,” Nucleic Acids Research, vol. 32, no. 5. Oxford University Press, pp. 1731–1737, 2004.
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2004 | Journal Article | IST-REx-ID: 875
F. Kondrashov and E. Koonin, “A common framework for understanding the origin of genetic dominance and evolutionary fates of gene duplications,” Trends in Genetics, vol. 20, no. 7. Elsevier, pp. 287–291, 2004.
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2004 | Journal Article | IST-REx-ID: 1963
A. Mamedova, P. Holt, J. Carroll, and L. A. Sazanov, “Substrate-induced conformational change in bacterial complex I,” Journal of Biological Chemistry, vol. 279, no. 22. American Society for Biochemistry and Molecular Biology, pp. 23830–23836, 2004.
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2004 | Journal Article | IST-REx-ID: 209
T. D. Browning and R. Heath Brown, “Equal sums of three powers,” Inventiones Mathematicae, vol. 157, no. 3. Unknown, pp. 553–573, 2004.
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2004 | Journal Article | IST-REx-ID: 7333
M. Santis, D. Schmid, M. Ruge, S. A. Freunberger, and F. N. Büchi, “Modular stack-internal air humidification concept-verification in a 1 kW stack,” Fuel Cells, vol. 4, no. 3. Wiley, pp. 214–218, 2004.
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2004 | Journal Article | IST-REx-ID: 7334
J. Mantzaras et al., “Fuel cell modeling and simulations,” CHIMIA International Journal for Chemistry, vol. 58, no. 12. Swiss Chemical Society, pp. 857–868, 2004.
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2004 | Journal Article | IST-REx-ID: 7706
A. Brunet et al., “Stress-dependent regulation of FOXO transcription factors by the SIRT1 deacetylase,” Science, vol. 303, no. 5666. American Association for the Advancement of Science, pp. 2011–2015, 2004.
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2004 | Conference Paper | IST-REx-ID: 4629
L. De Alfaro, M. Faella, T. A. Henzinger, R. Majumdar, and M. Stoelinga, “Model checking discounted temporal properties,” presented at the TACAS: Tools and Algorithms for the Construction and Analysis of Systems, 2004, vol. 2988, pp. 77–92.
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2004 | Journal Article | IST-REx-ID: 6155
B. H. . Cheung, F. Arellano-Carbajal, I. Rybicki, and M. de Bono, “Soluble guanylate cyclases act in neurons exposed to the body fluid to promote C. elegans aggregation behavior,” Current Biology, vol. 14, no. 12. Elsevier, pp. 1105–1111, 2004.
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2004 | Journal Article | IST-REx-ID: 1456 | OA
T. Hausel, E. Hunsicker, and R. Mazzeo, “Hodge cohomology of gravitational instantons,” Duke Mathematical Journal, vol. 122, no. 3. Duke University Press, pp. 485–548, 2004.
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2004 | Journal Article | IST-REx-ID: 1464 | OA
T. Hausel and M. Thaddeus, “Generators for the cohomology ring of the moduli space of rank 2 higgs bundles,” Proceedings of the London Mathematical Society, vol. 88, no. 3. Oxford University Press, pp. 632–658, 2004.
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2004 | Journal Article | IST-REx-ID: 889
A. Kern and F. Kondrashov, “Mechanisms and convergence of compensatory evolution in mammalian mitochondrial tRNAs,” Nature Genetics, vol. 36, no. 11. Nature Publishing Group, pp. 1207–1212, 2004.
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2004 | Journal Article | IST-REx-ID: 898
G. Bazykin, F. Kondrashov, A. Ogurtsov, S. Sunyaev, and A. Kondrashov, “Positive selection at sites of multiple amino acid replacements since rat-mouse divergence,” Nature, vol. 429, no. 6991. Nature Publishing Group, pp. 558–562, 2004.
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2004 | Journal Article | IST-REx-ID: 902
C. Castillo Davis, F. Kondrashov, D. Hartl, and R. Kulathinal, “The functional genomic distribution of protein divergence in two animal phyla: Coevolution, genomic conflict, and constraint,” Genome Research, vol. 14, no. 5. Cold Spring Harbor Laboratory Press, pp. 802–811, 2004.
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2004 | Journal Article | IST-REx-ID: 3805
P. M. Jonas, J. Bischofberger, D. Fricker, and R. Miles, “Interneuron Diversity series: Fast in, fast out--temporal and spatial signal processing in hippocampal interneurons,” Trends in Neurosciences, vol. 27, no. 1. Elsevier, pp. 30–40, 2004.
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2004 | Journal Article | IST-REx-ID: 3807 | OA
B. Kampa, J. Clements, P. M. Jonas, and G. Stuart, “Kinetics of Mg(2+) unblock of NMDA receptors: implications for spike-timing dependent synaptic plasticity,” Journal of Physiology, vol. 556, no. Pt 2. Wiley-Blackwell, pp. 337–45, 2004.
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2004 | Journal Article | IST-REx-ID: 3809
C. Schmidt Hieber, P. M. Jonas, and J. Bischofberger, “Enhanced synaptic plasticity in newly generated granule cells of the adult hippocampus,” Nature, vol. 429, no. 6988. Nature Publishing Group, pp. 184–7, 2004.
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2004 | Journal Article | IST-REx-ID: 3810
D. Oliver, C. Lien, M. Soom, T. Baukrowitz, P. M. Jonas, and B. Fakler, “Functional conversion between A-type and delayed rectifier K+ channels by membrane lipids,” Science, vol. 304, no. 5668. American Association for the Advancement of Science, pp. 265–70, 2004.
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2004 | Conference Paper | IST-REx-ID: 3894
K. Chatterjee, R. Majumdar, and M. Jurdziński, “On Nash equilibria in stochastic games,” presented at the CSL: Computer Science Logic, 2004, vol. 3210, pp. 26–40.
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2004 | Conference Paper | IST-REx-ID: 3895
K. Chatterjee, T. A. Henzinger, and M. Jurdziński, “Games with secure equilibria,” presented at the LICS: Logic in Computer Science, 2004, pp. 160–169.
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2004 | Journal Article | IST-REx-ID: 3918
J. Heinze, A. Böttcher, and S. Cremer, “Production of winged and wingless males in the ant, Cardiocondyla minutior,” Insectes Sociaux, vol. 51, no. 3. Springer, pp. 275–278, 2004.
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2004 | Journal Article | IST-REx-ID: 3929
V. Witte et al., “HIV-1 Nef mimics an integrin receptor signal that recruits the polycomb group protein Eed to the plasma membrane,” Molecular Cell, vol. 13, no. 2. Cell Press, pp. 179–190, 2004.
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2004 | Journal Article | IST-REx-ID: 3931
H. Zhang, S. Baader, M. K. Sixt, J. Kappler, and U. Rauch, “Neurocan-GFP fusion protein: a new approach to detect hyaluronan on tissue sections and living cells,” Journal of Histochemistry and Cytochemistry, vol. 52, no. 7. Histochemical Society, pp. 915–922, 2004.
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2004 | Journal Article | IST-REx-ID: 3984
P. Bremer, H. Edelsbrunner, B. Hamann, and V. Pascucci, “A topological hierarchy for functions on triangulated surfaces,” IEEE Transactions on Visualization and Computer Graphics, vol. 10, no. 4. IEEE, pp. 385–396, 2004.
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2004 | Journal Article | IST-REx-ID: 3985
K. Cole Mclaughlin, H. Edelsbrunner, J. Harer, V. Natarajan, and V. Pascucci, “Loops in Reeb graphs of 2-manifolds,” Discrete & Computational Geometry, vol. 32, no. 2. Springer, pp. 231–244, 2004.
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2004 | Journal Article | IST-REx-ID: 3986
R. Bryant, H. Edelsbrunner, P. Koehl, and M. Levitt, “The area derivative of a space-filling diagram,” Discrete & Computational Geometry, vol. 32, no. 3. Springer, pp. 293–308, 2004.
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2004 | Journal Article | IST-REx-ID: 3987
V. Natarajan and H. Edelsbrunner, “Simplification of three-dimensional density maps,” IEEE Transactions on Visualization and Computer Graphics, vol. 10, no. 5. IEEE, pp. 587–597, 2004.
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2004 | Conference Paper | IST-REx-ID: 3988
V. Choi, P. Agarwal, H. Edelsbrunner, and J. Rudolph, “Local search heuristic for rigid protein docking,” presented at the WABI: 4th International Workshop on Algorithms in Bioinformatics, 2004, vol. 3240, pp. 218–229.
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2004 | Conference Paper | IST-REx-ID: 3989
H. Edelsbrunner, J. Harer, V. Natarajan, and V. Pascucci, “Local and global comparison of continuous functions,” presented at the VIS: IEEE Visualization, 2004, pp. 275–280.
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2004 | Journal Article | IST-REx-ID: 3990
P. Agarwal, H. Edelsbrunner, and Y. Wang, “Computing the writhing number of a polygonal knot,” Discrete & Computational Geometry, vol. 32, no. 1. Springer, pp. 37–53, 2004.
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2004 | Journal Article | IST-REx-ID: 4172
J. Montero and C.-P. J. Heisenberg, “Gastrulation dynamics: cells move into focus,” Trends in Cell Biology, vol. 14, no. 11. Cell Press, pp. 620–627, 2004.
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2004 | Journal Article | IST-REx-ID: 4224
K. Kruse, P. Pantazis, M. T. Bollenbach, F. Julicher, and M. Gonzalez Gaitan, “Dpp gradient formation by dynamin-dependent endocytosis: receptor trafficking and the diffusion model,” Development, vol. 131, no. 19. Company of Biologists, pp. 4843–4856, 2004.
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2004 | Book Chapter | IST-REx-ID: 4230
H. de Vladar, R. Cipriani, B. Scharifker, and J. Bubis, “A mechanism for the prebiotic emergence of proteins,” in Life in the Universe From the Miller Experiment to the Search for Life on Other Worlds, A. Hanslmeier, S. Kempe, and J. Seckbach, Eds. Springer, 2004, pp. 83–87.
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2004 | Thesis | IST-REx-ID: 4236
H. de Vladar, “Métodos no lineales y sus aplicaciones en dinámicas aleatorias de poblaciones celulares,” Centro de estudios avazados, IVIC, 2004.
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2004 | Journal Article | IST-REx-ID: 4238
H. de Vladar and J. González, “Dynamic response of cancer under the influence of immunological activity and therapy,” Journal of Theoretical Biology, vol. 227, no. 3. Elsevier, pp. 335–348, 2004.
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2004 | Book Chapter | IST-REx-ID: 4239
H. de Vladar, R. Cipriani, B. Scharifker, and J. Bubis, “A Mechanism for the Prebiotic Emergence of Proteins,” in Life in the Universe From the Miller Experiment to the Search for Life on Other Worlds, vol. 7, J. Seckbach, J. Chela Flores, T. Owen, and F. Raulin, Eds. Springer, 2004, pp. 83–87.
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2004 | Journal Article | IST-REx-ID: 4253
N. H. Barton, A. Etheridge, and A. Sturm, “Coalescence in a Random Background,” Annals of Applied Probability, vol. 14, no. 2. Institute of Mathematical Statistics, pp. 754–785, 2004.
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2004 | Conference Paper | IST-REx-ID: 4372
O. Maler and D. Nickovic, “Monitoring Temporal Properties of Continuous Signals,” presented at the FORMATS: Formal Modeling and Analysis of Timed Systems, 2004, pp. 152–166.
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2004 | Thesis | IST-REx-ID: 4424
R. Jhala, “Program verification by lazy abstraction,” University of California, Berkeley, 2004.
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2004 | Conference Paper | IST-REx-ID: 4445
T. A. Henzinger and C. Kirsch, “A typed assembly language for real-time programs,” presented at the EMSOFT: Embedded Software , 2004, pp. 104–113.
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2004 | Conference Paper | IST-REx-ID: 4458
T. A. Henzinger, R. Jhala, R. Majumdar, and K. Mcmillan, “Abstractions from proofs,” presented at the POPL: Principles of Programming Languages, 2004, pp. 232–244.
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2004 | Conference Paper | IST-REx-ID: 4459
T. A. Henzinger, R. Jhala, and R. Majumdar, “Race checking by context inference,” presented at the PLDI: Programming Languages Design and Implementation, 2004, pp. 1–13.
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2004 | Book Chapter | IST-REx-ID: 4461
T. A. Henzinger, R. Jhala, R. Majumdar, and M. Sanvido, “Extreme model checking,” in Verification: Theory and Practice, vol. 2772, Springer, 2004, pp. 332–358.
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2004 | Conference Paper | IST-REx-ID: 4525
A. Ghosal, T. A. Henzinger, C. Kirsch, and M. Sanvido, “Event-driven programming with logical execution times,” presented at the HSCC: Hybrid Systems - Computation and Control, 2004, vol. 2993, pp. 167–170.
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2004 | Conference Paper | IST-REx-ID: 4555
K. Chatterjee, L. De Alfaro, and T. A. Henzinger, “Trading memory for randomness,” presented at the QEST: Quantitative Evaluation of Systems, 2004, pp. 206–217.
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2004 | Journal Article | IST-REx-ID: 4556
K. Chatterjee, D. Ma, R. Majumdar, T. Zhao, T. A. Henzinger, and J. Palsberg, “Stack size analysis for interrupt-driven programs,” Information and Computation, vol. 194, no. 2. Elsevier, pp. 144–174, 2004.
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