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6396 Publications


2006 | Conference Paper | IST-REx-ID: 4432
Henzinger TA, Prabhu V. 2006. Timed alternating-time temporal logic. FORMATS: Formal Modeling and Analysis of Timed Systems, LNCS, vol. 4202, 1–17.
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2006 | Conference Paper | IST-REx-ID: 4436
Henzinger TA, Matic S. 2006. An interface algebra for real-time components. RTAS: Real-time and Embedded Technology and Applications Symposium, 253–266.
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2006 | Conference Paper | IST-REx-ID: 4437
Henzinger TA, Piterman N. 2006. Solving games without determinization. CSL: Computer Science Logic, LNCS, vol. 4207, 395–410.
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2006 | Journal Article | IST-REx-ID: 4451
Henzinger TA, Kupferman O, Majumdar R. 2006. On the universal and existential fragments of the mu-calculus. Theoretical Computer Science. 354(2), 173–186.
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2006 | Conference Paper | IST-REx-ID: 4523
Gulavani B, Henzinger TA, Kannan Y, Nori A, Rajamani S. 2006. Synergy: A new algorithm for property checking. FSE: Foundations of Software Engineering, 117–127.
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2006 | Conference Paper | IST-REx-ID: 4526
Ghosal A, Henzinger TA, Iercan D, Kirsch C, Sangiovanni Vincentelli A. 2006. A hierarchical coordination language for interacting real-time tasks. EMSOFT: Embedded Software , 132–141.
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2006 | Conference Paper | IST-REx-ID: 4528
Fisher J, Henzinger TA. 2006. Executable biology. WSC: Winter Simulation Conference, 1675–1682.
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2006 | Conference Paper | IST-REx-ID: 4538
Chatterjee K, Henzinger TA. 2006. Strategy improvement and randomized subexponential algorithms for stochastic parity games. STACS: Theoretical Aspects of Computer Science, LNCS, vol. 3884, 512–523.
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2006 | Conference Paper | IST-REx-ID: 4539
Chatterjee K, Henzinger TA. 2006. Finitary winning in omega-regular games. TACAS: Tools and Algorithms for the Construction and Analysis of Systems, LNCS, vol. 3920, 257–271.
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2006 | Conference Paper | IST-REx-ID: 4549
Chatterjee K, De Alfaro L, Faella M, Henzinger TA, Majumdar R, Stoelinga M. 2006. Compositional quantitative reasoning. QEST: Quantitative Evaluation of Systems, 179–188.
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2006 | Journal Article | IST-REx-ID: 4550
Chatterjee K, Henzinger TA, Jurdziński M. 2006. Games with secure equilibria. Theoretical Computer Science. 365(1–2), 67–82.
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2006 | Conference Paper | IST-REx-ID: 4551
Chatterjee K, Majumdar R, Henzinger TA. 2006. Markov decision processes with multiple objectives. STACS: Theoretical Aspects of Computer Science, LNCS, vol. 3884, 325–336.
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2006 | Conference Paper | IST-REx-ID: 4552
Chatterjee K, De Alfaro L, Henzinger TA. 2006. Strategy improvement for concurrent reachability games. QEST: Quantitative Evaluation of Systems, 291–300.
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2006 | Conference Paper | IST-REx-ID: 4574
Beyer D, Henzinger TA, Théoduloz G. 2006. Lazy shape analysis. CAV: Computer Aided Verification, LNCS, vol. 4144, 532–546.
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2006 | Book Chapter | IST-REx-ID: 3002
Sauer M, Friml J. 2006.In vitro culture of Arabidopsis embryos. In: Somatic Embryogenesis. Plant Cell Monographs, vol. 2, 343–354.
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2006 | Journal Article | IST-REx-ID: 3005
Friml J, Benfey P, Benková E, Bennett M, Berleth T, Geldner N, Grebe M, Heisler M, Hejátko J, Jürgens G, Laux T, Lindsey K, Lukowitz W, Luschnig C, Offringa R, Scheres B, Swarup R, Torres Ruiz R, Weijers D, Zažímalová E. 2006. Apical-basal polarity: Why plant cells don’t stand on their heads. Trends in Plant Science. 11(1), 12–14.
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2006 | Journal Article | IST-REx-ID: 3006
Dhonukshe P, Baluška F, Schlicht M, Hlavacka A, Šamaj J, Friml J, Gadella T. 2006. Endocytosis of cell surface material mediates cell plate formation during plant cytokinesis. Developmental Cell. 10(1), 137–150.
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2006 | Journal Article | IST-REx-ID: 3007
Abas L, Benjamins R, Malenica N, Paciorek T, Wiśniewska J, Moulinier Anzola J, Sieberer T, Friml J, Luschnig C. 2006. Intracellular trafficking and proteolysis of the Arabidopsis auxin-efflux facilitator PIN2 are involved in root gravitropism. Nature Cell Biology. 8(3), 249–256.
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2006 | Journal Article | IST-REx-ID: 3008
Xu J, Hofhuis H, Heidstra R, Sauer M, Friml J, Scheres B. 2006. A molecular framework for plant regeneration. Science. 311(5759), 385–388.
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2006 | Journal Article | IST-REx-ID: 3009 | OA
Paciorek T, Friml J. 2006. Auxin signaling. Journal of Cell Science. 119(7), 1199–1202.
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2006 | Journal Article | IST-REx-ID: 3010
Scarpella E, Marcos D, Friml J, Berleth T. 2006. Control of leaf vascular patterning by polar auxin transport. Genes and Development. 20(8), 1015–1027.
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2006 | Journal Article | IST-REx-ID: 3011
Wiśniewska J, Xu J, Seifertová D, Brewer P, Růžička K, Blilou I, Rouquié D, Benková E, Scheres B, Friml J. 2006. Polar PIN localization directs auxin flow in plants. Science. 312(5775).
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2006 | Journal Article | IST-REx-ID: 3012
Petrášek J, Mravec J, Bouchard R, Blakeslee J, Abas MF, Seifertová D, Wiśniewska J, Tadele Z, Kubeš M, Čovanová M, Dhonukshe P, Skůpa P, Benková E, Perry L, Křeček P, Lee O, Fink G, Geisler M, Murphy A, Luschnig C, Zažímalová E, Friml J. 2006. PIN proteins perform a rate-limiting function in cellular auxin efflux. Science. 312(5775), 914–918.
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2006 | Journal Article | IST-REx-ID: 3013
Paciorek T, Sauer M, Balla J, Wiśniewska J, Friml J. 2006. Immunocytochemical technique for protein localization in sections of plant tissues. Nature Protocols. 1(1), 104–107.
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2006 | Journal Article | IST-REx-ID: 3014
Brewer P, Heisler M, Hejátko J, Friml J, Benková E. 2006. In situ hybridization for mRNA detection in Arabidopsis tissue sections. Nature Protocols. 1(3), 1462–1467.
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2006 | Journal Article | IST-REx-ID: 3015
Sauer M, Paciorek T, Benková E, Friml J. 2006. Immunocytochemical techniques for whole mount in situ protein localization in plants. Nature Protocols. 1(1), 98–103.
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2006 | Journal Article | IST-REx-ID: 3016
Sauer M, Balla J, Luschnig C, Wiśniewska J, Reinöhl V, Friml J, Benková E. 2006. Canalization of auxin flow by Aux/IAA-ARF-dependent feedback regulation of PIN polarity. Genes and Development. 20(20), 2902–2911.
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2006 | Journal Article | IST-REx-ID: 3017
Tanaka H, Dhonukshe P, Brewer P, Friml J. 2006. Spatiotemporal asymmetric auxin distribution: A means to coordinate plant development. Cellular and Molecular Life Sciences. 63(23), 2738–2754.
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2006 | Journal Article | IST-REx-ID: 3018
Kleine Vehn J, Dhonukshe P, Swarup R, Bennett M, Friml J. 2006. Subcellular trafficking of the Arabidopsis auxin influx carrier AUX1 uses a novel pathway distinct from PIN1. Plant Cell. 18(11), 3171–3181.
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2006 | Journal Article | IST-REx-ID: 3020
Hejátko J, Blilou I, Brewer P, Friml J, Scheres B, Benková E. 2006. In situ hybridization technique for mRNA detection in whole mount Arabidopsis samples. Nature Protocols. 1(4), 1939–1946.
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2006 | Journal Article | IST-REx-ID: 3152
Kunwar P, Siekhaus DE, Lehmann R. 2006. In vivo migration A germ cell perspective. Annual Review of Cell and Developmental Biology. 22, 237–265.
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2006 | Conference Paper | IST-REx-ID: 3180
Szeliski R, Zabih R, Scharstein D, Veksler O, Kolmogorov V, Agarwala A, Tappen M, Rother C. 2006. A comparative study of energy minimization methods for Markov random fields. ECCV: European Conference on Computer Vision vol. 3952, 16–29.
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2006 | Conference Paper | IST-REx-ID: 3184
Kolmogorov V, Rother C. 2006. Comparison of energy minimization algorithms for highly connected graphs. ECCV: European Conference on Computer Vision, LNCS, vol. 3952 LNCS, 1–15.
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2006 | Journal Article | IST-REx-ID: 3185
Kolmogorov V, Criminisi A, Blake A, Cross G, Rother C. 2006. Probabilistic fusion of stereo with color and contrast for bilayer segmentation. IEEE Transactions on Pattern Analysis and Machine Intelligence. 28(9), 1480–1492.
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2006 | Conference Paper | IST-REx-ID: 3186
Boykov Y, Kolmogorov V, Cremers D, Delong A. 2006. An integral solution to surface evolution PDEs via geo cuts. ECCV: European Conference on Computer Vision, LNCS, vol. 3953, 409–422.
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2006 | Conference Paper | IST-REx-ID: 3188
Rother C, Kolmogorov V, Minka T, Blake A. 2006. Cosegmentation of image pairs by histogram matching - Incorporating a global constraint into MRFs. CVPR: Computer Vision and Pattern Recognition, 993–1000.
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2006 | Conference Paper | IST-REx-ID: 3189
Criminisi A, Cross G, Blake A, Kolmogorov V. 2006. Bilayer segmentation of live video. CVPR: Computer Vision and Pattern Recognition vol. 1, 53–60.
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2006 | Journal Article | IST-REx-ID: 3190
Kolmogorov V. 2006. Convergent tree reweighted message passing for energy minimization. IEEE Transactions on Pattern Analysis and Machine Intelligence. 28(10), 1568–1583.
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2006 | Conference Paper | IST-REx-ID: 3214
Maurer U, Oswald Y, Pietrzak KZ, Sjödin J. 2006. Luby Rackoff ciphers from weak round functions . EUROCRYPT: Theory and Applications of Cryptographic Techniques, LNCS, vol. 4004, 391–408.
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2006 | Conference Paper | IST-REx-ID: 3215
Dodis Y, Pietrzak KZ, Przydatek B. 2006. Separating sources for encryption and secret sharing. TCC: Theory of Cryptography Conference, LNCS, vol. 3876, 601–616.
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2006 | Conference Paper | IST-REx-ID: 3216
Pietrzak KZ. 2006. A tight bound for EMAC. ICALP: Automata, Languages and Programming, LNCS, vol. 4052, 168–179.
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2006 | Conference Paper | IST-REx-ID: 3217
Pietrzak KZ. 2006. Composition implies adaptive security in minicrypt. EUROCRYPT: Theory and Applications of Cryptographic Techniques, LNCS, vol. 4004, 328–338.
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2006 | Book Chapter | IST-REx-ID: 3404
Janovjak HL, Sawhney R, Stark M, Mueller D. 2006.Atomic force microscopy. In: Techniques in Microscopy for Biomedical Applications. Manuals in Biomedical Research, vol. 2, 213–284.
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2006 | Journal Article | IST-REx-ID: 3413
Kessler M, Gottschalk K, Janovjak HL, Mueller D, Gaub H. 2006. Bacteriorhodopsin folds into the membrane against an external force. Journal of Molecular Biology. 357(2), 644–654.
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2006 | Journal Article | IST-REx-ID: 3414
Kedrov A, Janovjak HL, Ziegler C, Kühlbrandt W, Mueller D. 2006. Observing folding pathways and kinetics of a single sodium-proton antiporter from Escherichia coli. Journal of Molecular Biology. 355(1), 2–8.
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2006 | Book Review | IST-REx-ID: 3415
Janovjak HL, Kedrov A, Cisneros D, Sapra T, Struckmeier J, Mueller D. 2006. Imaging and detecting molecular interactions of single membrane proteins. Neurobiology of Aging. 27, 546–561.
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2006 | Preprint | IST-REx-ID: 3431 | OA
Tkačik G, Schneidman E, Berry M, Bialek W. 2006. Ising models for networks of real neurons. ArXiv, 1–4, .
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2006 | Journal Article | IST-REx-ID: 3437
Betancourt A, Bollback JP. 2006. Fitness effects of beneficial mutations: the mutational landscape model in experimental evolution. Current Opinion in Genetics & Development. 16(6), 618–623.
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2006 | Conference Paper | IST-REx-ID: 3449
Chatterjee K, Jagadeesan R, Pitcher C. 2006. Games for controls. CSF: Computer Security Foundations, 70–82.
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2006 | Book Review | IST-REx-ID: 3463
Bischofberger J, Engel D, Frotscher M, Jonas PM. 2006. Timing and efficacy of transmitter release at mossy fiber synapses in the hippocampal network. (Review). Pflugers Archiv : European Journal of Physiology. 453(3), 361–372.
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