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6745 Publications


2008 | Conference Paper | IST-REx-ID: 4244 View | DOI
 

2008 | Journal Article | IST-REx-ID: 4245
Effects of spontaneous mutation accumulation on sex ratio traits
B. Pannebakker, D. Halligan, K.T. Reynolds, G. Ballantyne, D. Shuker, N.H. Barton, S. West, Evolution; International Journal of Organic Evolution 62 (2008) 1921–1935.
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2008 | Conference Paper | IST-REx-ID: 4366
Heap Assumptions on Demand
A. Podelski, A. Rybalchenko, T. Wies, in:, Springer, 2008, pp. 314–327.
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2008 | Book Chapter | IST-REx-ID: 4371
Checking temporal properties of discrete, timed and continuous behaviors
O. Maler, D. Nickovic, A. Pnueli, in:, Pillars of Computer Science: Essays Dedicated To Boris (Boaz) Trakhtenbrot on the Occasion of His 85th Birthday, Springer, 2008, pp. 475–505.
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2008 | Conference Paper | IST-REx-ID: 4384 | OA
Model checking transactional memories
R. Guerraoui, T.A. Henzinger, B. Jobstmann, V. Singh, in:, ACM, 2008, pp. 372–382.
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2008 | Conference Paper | IST-REx-ID: 4386
Permissiveness in transactional memories
R. Guerraoui, T.A. Henzinger, V. Singh, in:, Springer, 2008, pp. 305–319.
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2008 | Conference Paper | IST-REx-ID: 4387
Completeness and nondeterminism in model checking transactional memories
R. Guerraoui, T.A. Henzinger, V. Singh, in:, Schloss Dagstuhl - Leibniz-Zentrum für Informatik, 2008, pp. 21–35.
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2008 | Conference Paper | IST-REx-ID: 4397
CSIsat: Interpolation for LA+EUF
D. Beyer, D. Zufferey, R. Majumdar, in:, Springer, 2008, pp. 304–308.
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2008 | Conference Paper | IST-REx-ID: 4400
Security Evaluation of ES&S Voting Machines and Election Management System
A. Aviv, P. Cerny, S. Clark, E. Cronin, G. Shah, M. Sherr, M. Blaze, in:, USENIX, 2008.
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2008 | Thesis | IST-REx-ID: 4409
Games for the verification of timed systems
V. Prabhu, Games for the Verification of Timed Systems, University of California, Berkeley, 2008.
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2008 | Thesis | IST-REx-ID: 4415
Compositionality in deterministic real-time embedded systems
S. Matic, Compositionality in Deterministic Real-Time Embedded Systems, University of California, Berkeley, 2008.
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2008 | Conference Paper | IST-REx-ID: 4452
Valigator: A verification tool with bound and invariant generation
T.A. Henzinger, T. Hottelier, L. Kovács, in:, Springer, 2008, pp. 333–342.
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2008 | Journal Article | IST-REx-ID: 4509
Two challenges in embedded systems design: Predictability and robustness
T.A. Henzinger, Philosophical Transactions of the Royal Society A Mathematical Physical and Engineering Sciences 366 (2008) 3727–3736.
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2008 | Conference Paper | IST-REx-ID: 4521
Proving non-termination
A. Gupta, T.A. Henzinger, R. Majumdar, A. Rybalchenko, R. Xu, in:, ACM, 2008, pp. 147–158.
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2008 | Thesis | IST-REx-ID: 4524
A hierarchical coordination language for reliable real-time tasks
A. Ghosal, A Hierarchical Coordination Language for Reliable Real-Time Tasks, University of California, Berkeley, 2008.
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2008 | Conference Paper | IST-REx-ID: 4527
Bounded asynchrony: Concurrency for modeling cell-cell interactions
J. Fisher, T.A. Henzinger, M. Mateescu, N. Piterman, in:, Springer, 2008, pp. 17–32.
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2008 | Journal Article | IST-REx-ID: 4532
Equivalence of labeled Markov chains
L. Doyen, T.A. Henzinger, J. Raskin, International Journal of Foundations of Computer Science 19 (2008) 549–563.
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2008 | Conference Paper | IST-REx-ID: 4533
Interface theories with component reuse
L. Doyen, T.A. Henzinger, B. Jobstmann, T. Petrov, in:, ACM, 2008, pp. 79–88.
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2008 | Journal Article | IST-REx-ID: 4534
Reduction of stochastic parity to stochastic mean-payoff games
K. Chatterjee, T.A. Henzinger, Information Processing Letters 106 (2008) 1–7.
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2008 | Conference Paper | IST-REx-ID: 4546
Logical reliability of interacting real-time tasks
K. Chatterjee, A. Ghosal, T.A. Henzinger, D. Iercan, C. Kirsch, C. Pinello, A. Sangiovanni Vincentelli, in:, IEEE, 2008, pp. 909–914.
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2008 | Journal Article | IST-REx-ID: 4548
Stochastic limit-average games are in EXPTIME
K. Chatterjee, R. Majumdar, T.A. Henzinger, International Journal of Game Theory 37 (2008) 219–234.
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2008 | Conference Paper | IST-REx-ID: 4568
Program analysis with dynamic change of precision
D. Beyer, T.A. Henzinger, G. Théoduloz, in:, ACM, 2008, pp. 29–38.
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2008 | Journal Article | IST-REx-ID: 3030
Role of alternative telomere lengthening unmasked in telomerase knock-out mutant plants
E. Růčková, J. Friml, P. Procházková Schrumpfová, J. Fajkus, Plant Molecular Biology 66 (2008) 637–646.
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2008 | Journal Article | IST-REx-ID: 3031
Auxin transport inhibitors impair vesicle motility and actin cytoskeleton dynamics in diverse eukaryotes
P. Dhonukshe, I. Grigoriev, R. Fischer, M. Tominaga, D. Robinson, J. Hašek, T. Paciorek, J. Petrášek, D. Seifertová, R. Tejos, L. Meisel, E. Zažímalová, T. Gadella, Y. Stierhof, T. Ueda, K. Oiwa, A. Akhmanova, R. Brock, A. Spang, J. Friml, PNAS 105 (2008) 4489–4494.
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2008 | Journal Article | IST-REx-ID: 3032
ARF GEF dependent transcytosis and polar delivery of PIN auxin carriers in Arabidopsis
J. Kleine Vehn, P. Dhonukshe, M. Sauer, P. Brewer, J. Wiśniewska, T. Paciorek, E. Benková, J. Friml, Current Biology 18 (2008) 526–531.
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2008 | Book Chapter | IST-REx-ID: 3033
Visualization of auxin gradients in embryogenesis
M. Sauer, J. Friml, in:, M. Suárez, P. Bozhkov (Eds.), Plant Embryogenesis, Humana Press, 2008, pp. 137–144.
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2008 | Journal Article | IST-REx-ID: 3034
Plant biology: In their neighbour's shadow
J. Friml, M. Sauer, Nature 453 (2008) 298–299.
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2008 | Book Chapter | IST-REx-ID: 3035
In vitro culture of Arabidopsis embryos
M. Sauer, J. Friml, in:, M. Suárez, P. Bozhkov (Eds.), Plant Embryogenesis, Humana Press, 2008, pp. 71–76.
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2008 | Journal Article | IST-REx-ID: 3036
Auxin acts as a local morphogenetic trigger to specify lateral root founder cells
J. Dubrovsky, M. Sauer, S. Napsucialy Mendivil, M. Ivanchenko, J. Friml, S. Shishkova, J. Celenza, E. Benková, PNAS 105 (2008) 8790–8794.
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2008 | Journal Article | IST-REx-ID: 3037 | OA
PIN polar targeting
E. Feraru, J. Friml, Plant Physiology 147 (2008) 1553–1559.
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2008 | Journal Article | IST-REx-ID: 3038
The auxin influx carrier LAX3 promotes lateral root emergence
Swarup K, Benková E, Swarup R, Casimiro I, Péret B, Yang Y, Parry G, Nielsen E, De Smet I, Vanneste S, Levesque M, Carrier D, James N, Calvo V, Ljung K, Kramer E, Roberts R, Graham N, Marillonnet S, Patel K, Jones J, Taylor C, Schachtman D, May S, Sandberg G, Benfey P, Friml J, Kerr I, Beeckman T, Laplaze L, Bennett M. 2008. The auxin influx carrier LAX3 promotes lateral root emergence. Nature Cell Biology. 10(8), 946–954.
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2008 | Journal Article | IST-REx-ID: 3039
Receptor-like kinase ACR4 restricts formative cell divisions in the Arabidopsis root
I. De Smet, V. Vassileva, B. De Rybel, M. Levesque, W. Grunewald, D. Van Damme, G. Van Noorden, M. Naudts, G. Van Isterdael, R. De Clercq, J. Wang, N. Meuli, S. Vanneste, J. Friml, P. Hilson, G. Jürgens, G. Ingram, D. Inzé, P. Benfey, T. Beeckman, Science 322 (2008) 594–597.
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2008 | Journal Article | IST-REx-ID: 3040
Cellular and molecular requirements for polar PIN targeting and transcytosis in plants
J. Kleine Vehn, Ł. Łangowski, J. Wiśniewska, P. Dhonukshe, P. Brewer, J. Friml, Molecular Plant 1 (2008) 1056–1066.
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2008 | Journal Article | IST-REx-ID: 3041
Flavonoids redirect PIN mediated polar auxin fluxes during root gravitropic responses
D. Santelia, S. Henrichs, V. Vincenzetti, M. Sauer, L. Bigler, M. Klein, A. Bailly, Y. Lee, J. Friml, M. Geisler, E. Martinoia, Journal of Biological Chemistry 283 (2008) 31218–31226.
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2008 | Journal Article | IST-REx-ID: 3042
Differential degradation of PIN2 auxin efflux carrier by retromer dependent vacuolar targeting
J. Kleine Vehn, J. Leitner, M. Zwiewka, M. Sauer, L. Abas, C. Luschnig, J. Friml, PNAS 105 (2008) 17812–17817.
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2008 | Journal Article | IST-REx-ID: 3043
Polar targeting and endocytic recycling in auxin-dependent plant development
J. Kleine Vehn, J. Friml, Annual Review of Cell and Developmental Biology 24 (2008) 447–473.
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2008 | Journal Article | IST-REx-ID: 3044
Interaction of PIN and PGP transport mechanisms in auxin distribution-dependent development
J. Mravec, M. Kubeš, A. Bielach, V. Gaykova, J. Petrášek, P. Skůpa, S. Chand, E. Benková, E. Zažímalová, J. Friml, Development 135 (2008) 3345–3354.
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2008 | Journal Article | IST-REx-ID: 3045
Generation of cell polarity in plants links endocytosis auxin distribution and cell fate decisions
P. Dhonukshe, H. Tanaka, T. Goh, K. Ebine, A. Mähönen, K. Prasad, I. Blilou, N. Geldner, J. Xu, T. Uemura, J. Chory, T. Ueda, A. Nakano, B. Scheres, J. Friml, Nature 456 (2008) 962–966.
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2008 | Conference Paper | IST-REx-ID: 3194
On partial optimality in multi label MRFs
P. Kohli, A. Shekhovtsov, C. Rother, V. Kolmogorov, P. Torr, in:, Omnipress, 2008, pp. 480–487.
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2008 | Conference Paper | IST-REx-ID: 3195
Graph cut based image segmentation with connectivity priors
S. Vicente, V. Kolmogorov, C. Rother, in:, IEEE, 2008.
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2008 | Journal Article | IST-REx-ID: 3196
A comparative study of energy minimization methods for Markov random fields with smoothness-based priors
R. Szeliski, R. Zabih, D. Scharstein, O. Veksler, V. Kolmogorov, A. Agarwala, M. Tappen, C. Rother, IEEE Transactions on Pattern Analysis and Machine Intelligence 30 (2008) 1068–1080.
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2008 | Conference Paper | IST-REx-ID: 3198
Feature correspondence via graph matching: Models and global optimization
L. Torresani, V. Kolmogorov, C. Rother, in:, Springer, 2008, pp. 596–609.
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2008 | Conference Paper | IST-REx-ID: 3224
A new mode of operation for block ciphers and length preserving MACs
Y. Dodis, K.Z. Pietrzak, P. Puniya, in:, Springer, 2008, pp. 198–219.
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2008 | Conference Paper | IST-REx-ID: 3225
Robust multi property combiners for hash functions revisited
M. Fischlin, A. Lehmann, K.Z. Pietrzak, in:, Springer, 2008, pp. 655–666.
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2008 | Conference Paper | IST-REx-ID: 3226
Weak pseudorandom functions in minicrypt
K.Z. Pietrzak, J. Sjödin, in:, Springer, 2008, pp. 423–436.
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2008 | Journal Article | IST-REx-ID: 3227
Elektrowiz – system of measurement data management
P. Zubielik, J. Nadaczny, K.Z. Pietrzak, M. Lawenda, Przeglad Elektrotechniczny 84 (2008) 239–242.
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2008 | Conference Paper | IST-REx-ID: 3228
Compression from collisions or why CRHF combiners have a long output
K.Z. Pietrzak, in:, Springer, 2008, pp. 413–432.
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2008 | Conference Paper | IST-REx-ID: 3229
Leakage resilient cryptography
S. Dziembowski, K.Z. Pietrzak, in:, IEEE, 2008, pp. 293–302.
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2008 | Journal Article | IST-REx-ID: 3291
Contribution of galactofuranose to the virulence of the opportunistic pathogen Aspergillus fumigatus
P.S. Schmalhorst, S. Krappmann, W. Vervecken, M. Rohde, M. Müller, G. Braus, R. Contreras, A. Braun, H. Bakker, F. Routier, Eukaryotic Cell 7 (2008) 1268–1277.
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2008 | Journal Article | IST-REx-ID: 3307 | OA
A complete neandertal mitochondrial genome sequence determined by highhhroughput sequencing
Green R, Malaspinas A, Krause J, Briggs A, Johnson P, Uhler C, Meyer M, Good J, Maricic T, Stenzel U, Prüfer K, Siebauer M, Burbano H, Ronan M, Rothberg J, Egholm M, Rudan P, Brajković D, Kućan Ž, Gušić I, Wikström M, Laakkonen L, Kelso J, Slatkin M, Pääbo S. 2008. A complete neandertal mitochondrial genome sequence determined by highhhroughput sequencing. Cell. 134, 416–426.
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