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6021 Publications


2004 | Book Review | IST-REx-ID: 3142
S. Hippenmeyer, I. Kramer, and S. Arber, “Control of neuronal phenotype: What targets tell the cell bodies,” Trends in Neurosciences, vol. 27, no. 8. Elsevier, pp. 482–488, 2004.
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2004 | Journal Article | IST-REx-ID: 1963
A. Mamedova, P. Holt, J. Carroll, and L. A. Sazanov, “Substrate-induced conformational change in bacterial complex I,” Journal of Biological Chemistry, vol. 279, no. 22, pp. 23830–23836, 2004.
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2004 | Journal Article | IST-REx-ID: 864
A. Panchenko, F. Kondrashov, and S. Bryant, “Prediction of functional sites by analysis of sequence and structure conservation,” Protein Science, vol. 13, no. 4, pp. 884–892, 2004.
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2004 | Journal Article | IST-REx-ID: 870
F. Kondrashov, A. Ogurtsov, and A. Kondrashov, “Bioinformatical assay of human gene morbidity,” Nucleic Acids Research, vol. 32, no. 5, pp. 1731–1737, 2004.
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2004 | Journal Article | IST-REx-ID: 875
F. Kondrashov and E. Koonin, “A common framework for understanding the origin of genetic dominance and evolutionary fates of gene duplications,” Trends in Genetics, vol. 20, no. 7, pp. 287–291, 2004.
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2004 | Journal Article | IST-REx-ID: 889
A. Kern and F. Kondrashov, “Mechanisms and convergence of compensatory evolution in mammalian mitochondrial tRNAs,” Nature Genetics, vol. 36, no. 11, pp. 1207–1212, 2004.
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2004 | Journal Article | IST-REx-ID: 898
G. Bazykin, F. Kondrashov, A. Ogurtsov, S. Sunyaev, and A. Kondrashov, “Positive selection at sites of multiple amino acid replacements since rat-mouse divergence,” Nature, vol. 429, no. 6991, pp. 558–562, 2004.
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2004 | Journal Article | IST-REx-ID: 902
C. Castillo Davis, F. Kondrashov, D. Hartl, and R. Kulathinal, “The functional genomic distribution of protein divergence in two animal phyla: Coevolution, genomic conflict, and constraint,” Genome Research, vol. 14, no. 5, pp. 802–811, 2004.
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2004 | Journal Article | IST-REx-ID: 1456 | OA
T. Hausel, E. Hunsicker, and R. Mazzeo, “Hodge cohomology of gravitational instantons,” Duke Mathematical Journal, vol. 122, no. 3, pp. 485–548, 2004.
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2004 | Journal Article | IST-REx-ID: 1464 | OA
T. Hausel and M. Thaddeus, “Generators for the cohomology ring of the moduli space of rank 2 higgs bundles,” Proceedings of the London Mathematical Society, vol. 88, no. 3, pp. 632–658, 2004.
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2004 | Journal Article | IST-REx-ID: 3172
V. Kolmogorov et al., “Multiprocessor scheduling implementation of the simultaneous multiple volume SMV navigator method,” Magnetic Resonance in Medicine, vol. 52, no. 2, pp. 362–367, 2004.
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2004 | Journal Article | IST-REx-ID: 3173
V. Kolmogorov and R. Zabih, “What energy functions can be minimized via graph cuts? ,” IEEE Transactions on Pattern Analysis and Machine Intelligence, vol. 26, no. 2, pp. 147–159, 2004.
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2004 | Conference Paper | IST-REx-ID: 3177
R. Zabih and V. Kolmogorov, “Spatially coherent clustering using graph cuts,” presented at the CVPR: Computer Vision and Pattern Recognition, 2004, vol. 2, pp. 437–444.
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2004 | Journal Article | IST-REx-ID: 3178
Y. Boykov and V. Kolmogorov, “An experimental comparison of min-cut/max-flow algorithms for energy minimization in vision,” IEEE Transactions on Pattern Analysis and Machine Intelligence, vol. 26, no. 9, pp. 1124–1137, 2004.
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2004 | Conference Paper | IST-REx-ID: 3179
C. Rother, V. Kolmogorov, and A. Blake, “"GrabCut" - Interactive foreground extraction using iterated graph cuts ,” presented at the SIGGRAPH: Special Interest Group on Computer Graphics and Interactive Techniques, 2004, vol. 23, no. 3, pp. 309–314.
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2004 | Conference Paper | IST-REx-ID: 3208
U. Maurer and K. Z. Pietrzak, “Composition of random systems: When two weak make one strong,” presented at the TCC: Theory of Cryptography Conference, 2004, vol. 2951, pp. 410–427.
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2004 | Journal Article | IST-REx-ID: 3419
H. L. Janovjak, J. Struckmeier, M. Hubain, M. Kessler, A. Kedrov, and D. Mueller, “Probing the energy landscape of the membrane protein bacteriorhodopsin,” Structure, vol. 12, no. 5, pp. 871–879, 2004.
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2004 | Journal Article | IST-REx-ID: 3420
A. Kedrov, C. Ziegler, H. L. Janovjak, W. Kühlbrandt, and D. Mueller, “Controlled unfolding and refolding of a single sodium/proton antiporter using atomic force microscopy,” Journal of Molecular Biology, vol. 340, no. 5, pp. 1143–1152, 2004.
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2004 | Book Chapter | IST-REx-ID: 3574
H. Edelsbrunner, “Biological applications of computational topology,” in Handbook of Discrete and Computational Geometry, CRC Press, 2004, pp. 1395–1412.
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2004 | Book Chapter | IST-REx-ID: 3575
H. Edelsbrunner and J. Harer, “Jacobi sets of multiple Morse functions,” in Foundations of Computational Mathematics, vol. 312, Springer, 2004, pp. 37–57.
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2004 | Book Review | IST-REx-ID: 3595
B. Charlesworth and N. H. Barton, “Genome size: Does bigger mean worse?,” Current Biology, vol. 14, no. 6. Cell Press, pp. R233–R235, 2004.
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2004 | Journal Article | IST-REx-ID: 3614
N. H. Barton and M. Turelli, “Effects of allele frequency changes on variance components under a general model of epistasis,” Evolution; International Journal of Organic Evolution, vol. 58, no. 10, pp. 2111–2132, 2004.
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2004 | Journal Article | IST-REx-ID: 3615
M. Turelli and N. H. Barton, “Polygenic variation maintained by balancing selection: pleiotropy, sex-dependent allelic effects and GxE interactions,” Genetics, vol. 166, no. 2, pp. 1053–1079, 2004.
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2004 | Book Review | IST-REx-ID: 3616
N. H. Barton, “Speciation: Why, how, where and when?,” Current Biology, vol. 14, no. 15. Cell Press, pp. R603–R604, 2004.
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2004 | Journal Article | IST-REx-ID: 3617
N. H. Barton and A. Etheridge, “The effect of selection on genealogies,” Genetics, vol. 166, no. 2, pp. 1115–1131, 2004.
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2004 | Conference Paper | IST-REx-ID: 3688
A. Ulges, C. Lampert, and T. Breuel, “Document capture using stereo vision,” presented at the DocEng: ACM Symposium on Document Engineering, 2004, pp. 198–200.
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2004 | Journal Article | IST-REx-ID: 3805
P. M. Jonas, J. Bischofberger, D. Fricker, and R. Miles, “Interneuron Diversity series: Fast in, fast out--temporal and spatial signal processing in hippocampal interneurons,” Trends in Neurosciences, vol. 27, no. 1, pp. 30–40, 2004.
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2004 | Journal Article | IST-REx-ID: 3807 | OA
B. Kampa, J. Clements, P. M. Jonas, and G. Stuart, “Kinetics of Mg(2+) unblock of NMDA receptors: implications for spike-timing dependent synaptic plasticity,” Journal of Physiology, vol. 556, no. Pt 2, pp. 337–45, 2004.
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2004 | Journal Article | IST-REx-ID: 3809
C. Schmidt Hieber, P. M. Jonas, and J. Bischofberger, “Enhanced synaptic plasticity in newly generated granule cells of the adult hippocampus,” Nature, vol. 429, no. 6988, pp. 184–7, 2004.
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2004 | Journal Article | IST-REx-ID: 3810
D. Oliver, C. Lien, M. Soom, T. Baukrowitz, P. M. Jonas, and B. Fakler, “Functional conversion between A-type and delayed rectifier K+ channels by membrane lipids,” Science, vol. 304, no. 5668, pp. 265–70, 2004.
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2004 | Conference Paper | IST-REx-ID: 3894
K. Chatterjee, R. Majumdar, and M. Jurdziński, “On Nash equilibria in stochastic games,” presented at the CSL: Computer Science Logic, 2004, vol. 3210, pp. 26–40.
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2004 | Conference Paper | IST-REx-ID: 3895
K. Chatterjee, T. A. Henzinger, and M. Jurdziński, “Games with secure equilibria,” presented at the LICS: Logic in Computer Science, 2004, pp. 160–169.
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2004 | Book Chapter | IST-REx-ID: 3587
F. Ulrich and C.-P. J. Heisenberg, “Gastrulation in zebrafish,” in Fish development and genetics : the zebrafish and medaka models, vol. 2, V. Korzh and Z. Gong, Eds. World Scientific Publishing, 2004, pp. 39–86.
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2004 | Journal Article | IST-REx-ID: 4172
J. Montero and C.-P. J. Heisenberg, “Gastrulation dynamics: cells move into focus,” Trends in Cell Biology, vol. 14, no. 11, pp. 620–627, 2004.
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2004 | Journal Article | IST-REx-ID: 4238
H. de Vladar and J. González, “Dynamic response of cancer under the influence of immunological activity and therapy,” Journal of Theoretical Biology, vol. 227, no. 3, pp. 335–348, 2004.
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2004 | Journal Article | IST-REx-ID: 4224
K. Kruse, P. Pantazis, M. T. Bollenbach, F. Julicher, and M. Gonzalez Gaitan, “Dpp gradient formation by dynamin-dependent endocytosis: receptor trafficking and the diffusion model,” Development, vol. 131, no. 19, pp. 4843–4856, 2004.
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2004 | Thesis | IST-REx-ID: 4236
H. de Vladar, Métodos no lineales y sus aplicaciones en dinámicas aleatorias de poblaciones celulares. Centro de estudios avazados, IVIC, 2004.
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2004 | Thesis | IST-REx-ID: 4424
R. Jhala, Program verification by lazy abstraction. University of California, Berkeley, 2004, pp. 1–165.
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2004 | Journal Article | IST-REx-ID: 8517
D. Dolgopyat, V. Kaloshin, and L. Koralov, “A limit shape theorem for periodic stochastic dispersion,” Communications on Pure and Applied Mathematics, vol. 57, no. 9, pp. 1127–1158, 2004.
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2004 | Journal Article | IST-REx-ID: 8518
L. Koralov, V. Kaloshin, and D. Dolgopyat, “Sample path properties of the stochastic flows,” The Annals of Probability, vol. 32, no. 1A, pp. 1–27, 2004.
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2003 | Journal Article | IST-REx-ID: 205
T. D. Browning, “Counting rational points on cubic and quartic surfaces,” Acta Arithmetica, vol. 108, no. 3, pp. 275–295, 2003.
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2003 | Journal Article | IST-REx-ID: 206
T. D. Browning, “A note on the distribution of rational points on threefolds,” Quarterly Journal of Mathematics, vol. 54, no. 1, pp. 33–39, 2003.
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2003 | Journal Article | IST-REx-ID: 207
T. D. Browning, “Sums of four biquadrates,” Mathematical Proceedings of the Cambridge Philosophical Society, vol. 134, no. 3, pp. 385–395, 2003.
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2003 | Journal Article | IST-REx-ID: 208
T. D. Browning, “Counting rational points on diagonal quadratic surfaces,” Quarterly Journal of Mathematics, vol. 54, no. 1, pp. 11–31, 2003.
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2003 | Conference Paper | IST-REx-ID: 2337 | OA
É. Lieb and R. Seiringer, “Bose-Einstein condensation of dilute gases in traps ,” presented at the Differential Equations and Mathematical Physics, 2003, vol. 327, pp. 239–250.
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2003 | Journal Article | IST-REx-ID: 2354 | OA
R. Seiringer, “Ground state asymptotics of a dilute, rotating gas,” Journal of Physics A: Mathematical and Theoretical, vol. 36, no. 37, pp. 9755–9778, 2003.
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2003 | Journal Article | IST-REx-ID: 2357 | OA
É. Lieb, R. Seiringer, and J. Yngvason, “Poincaré inequalities in punctured domains,” Annals of Mathematics, vol. 158, no. 3, pp. 1067–1080, 2003.
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2003 | Journal Article | IST-REx-ID: 2358 | OA
É. Lieb, R. Seiringer, and J. Yngvason, “One-dimensional Bosons in three-dimensional traps,” Physical Review Letters, vol. 91, no. 15, pp. 1504011–1504014, 2003.
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2003 | Thesis | IST-REx-ID: 2414
U. Wagner, On k-Sets and Their Applications. ETH Zurich, 2003.
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2003 | Conference Paper | IST-REx-ID: 2422
U. Wagner, “On the rectilinear crossing number of complete graphs,” presented at the SODA: Symposium on Discrete Algorithms, 2003, pp. 583–588.
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