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6739 Publications


2008 | Journal Article | IST-REx-ID: 907
Assis, Raquel, Alexey Kondrashov, Eugene Koonin, and Fyodor Kondrashov. “Nested Genes and Increasing Organizational Complexity of Metazoan Genomes.” Trends in Genetics. Elsevier, 2008. https://doi.org/10.1016/j.tig.2008.08.003.
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2008 | Journal Article | IST-REx-ID: 965 | OA
Morozov, Alexei, and Maksym Serbyn. “Nonlinear Algebra and Bogoliubov’s Recursion.” Theoretical and Mathematical Physics. Elsevier, 2008. https://doi.org/10.1007/s11232-008-0026-7.
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2008 | Conference Paper | IST-REx-ID: 3714
Lampert, Christoph, Matthew Blaschko, and Thomas Hofmann. “Beyond Sliding Windows: Object Localization by Efficient Subwindow Search,” 1–8. IEEE, 2008. https://doi.org/10.1109/CVPR.2008.4587586.
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2008 | Conference Paper | IST-REx-ID: 3716
Lampert, Christoph, and Matthew Blaschko. “A Multiple Kernel Learning Approach to Joint Multi-Class Object Detection,” 5096:31–40. Springer, 2008. https://doi.org/10.1007/978-3-540-69321-5_4.
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2008 | Book Chapter | IST-REx-ID: 3726
Engel, Andreas, Harald L Janovjak, Dimtrios Fotiadis, Alexej Kedrov, David Cisneros, and Daniel Mueller. “Single-Molecule Microscopy and Force Spectroscopy of Membrane Proteins.” In Single Molecules and Nanotechnology, 12:279–311. Springer, 2008. https://doi.org/10.1007/978-3-540-73924-1_11.
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2008 | Journal Article | IST-REx-ID: 3734 | OA
Tkačik, Gašper, Thomas Gregor, and William Bialek. “The Role of Input Noise in Transcriptional Regulation.” PLoS One. Public Library of Science, 2008. https://doi.org/10.1371/journal.pone.0002774.
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2008 | Journal Article | IST-REx-ID: 3739
Tkačik, Gašper, Curtis Callan, and William Bialek. “Information Capacity of Genetic Regulatory Elements.” Physical Review E Statistical Nonlinear and Soft Matter Physics. American Institute of Physics, 2008. https://doi.org/10.1103/PhysRevE.78.011910.
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2008 | Journal Article | IST-REx-ID: 3740 | OA
Tkačik, Gašper, Curtis Callan, and William Bialek. “Information Flow and Optimization in Transcriptional Regulation.” PNAS. National Academy of Sciences, 2008. https://doi.org/10.1073/pnas.0806077105.
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2008 | Journal Article | IST-REx-ID: 3744 | OA
Tkačik, Gašper, and Marcelo Magnasco. “Decoding Spike Timing: The Differential Reverse-Correlation Method.” Biosystems. Elsevier, 2008. https://doi.org/10.1016/j.biosystems.2008.04.011.
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2008 | Journal Article | IST-REx-ID: 3751 | OA
Kinkhabwala, Ali, and Calin C Guet. “Uncovering Cis Regulatory Codes Using Synthetic Promoter Shuffling.” PLoS One. Public Library of Science, 2008. https://doi.org/10.1371/journal.pone.0002030.
View | Files available | DOI | PubMed | Europe PMC
 

2008 | Journal Article | IST-REx-ID: 3754
Guet, Calin C, Luke Bruneaux, Taejin Min, Dan Siegal Gaskins, Israel Figueroa, Thierry Emonet, and Philippe Cluzel. “Minimally Invasive Determination of MRNA Concentration in Single Living Bacteria.” Nucleic Acids Research. Oxford University Press, 2008. https://doi.org/10.1093/nar/gkn329.
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2008 | Journal Article | IST-REx-ID: 3760
Wojtan, Christopher J, and Greg Turk. “Fast Viscoelastic Behavior with Thin Features.” ACM Transactions on Graphics. ACM, 2008. https://doi.org/10.1145/1360612.1360646.
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2008 | Journal Article | IST-REx-ID: 3769
Kupczok, Anne, Arndt Von Haeseler, and Steffen Klaere. “An Exact Algorithm for the Geodesic Distance between Phylogenetic Trees.” Journal of Computational Biology. Mary Ann Liebert, 2008. https://doi.org/4200.
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2008 | Journal Article | IST-REx-ID: 3822 | OA
Schmidt Hieber, Christoph, Peter M Jonas, and Josef Bischofberger. “Action Potential Initiation and Propagation in Hippocampal Mossy Fibre Axons.” Journal of Physiology. Wiley-Blackwell, 2008. https://doi.org/10.1113/jphysiol.2007.150151 .
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2008 | Journal Article | IST-REx-ID: 3823
Kerr, Angharad, and Peter M Jonas. “The Two Sides of Hippocampal Mossy Fiber Plasticity (Review).” Neuron. Elsevier, 2008. https://doi.org/10.1016/j.neuron.2007.12.015.
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2008 | Journal Article | IST-REx-ID: 3824
Bucurenciu, Iancu, Ákos Kulik, Beat Schwaller, Michael Frotscher, and Peter M Jonas. “Nanodomain Coupling between Ca(2+) Channels and Ca2+ Sensors Promotes Fast and Efficient Transmitter Release at a Cortical GABAergic Synapse.” Neuron. Elsevier, 2008. https://doi.org/10.1016/j.neuron.2007.12.026.
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2008 | Journal Article | IST-REx-ID: 3825 | OA
Aponte, Yexica, Josef Bischofberger, and Peter M Jonas. “Efficient Ca(2+) Buffering in Fast-Spiking Basket Cells of Rat Hippocampus.” Journal of Physiology. Wiley-Blackwell, 2008. https://doi.org/10.1113/jphysiol.2007.147298.
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2008 | Journal Article | IST-REx-ID: 3826
Doischer, Daniel, Jonas Hosp, Yuchio Yanagawa, Kunihiko Obata, Peter M Jonas, Imre Vida, and Marlene Bartos. “Postnatal Differentiation of Basket Cells from Slow to Fast Signaling Devices.” Journal of Neuroscience. Society for Neuroscience, 2008. https://doi.org/10.1523/JNEUROSCI.2890-08.2008.
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2008 | Journal Article | IST-REx-ID: 3827
Kerr, Angharad, Ellen Reisinger, and Peter M Jonas. “Differential Dependence of Phasic Transmitter Release on Synaptotagmin 1 at GABAergic and Glutamatergic Hippocampal Synapses.” PNAS. National Academy of Sciences, 2008. https://doi.org/10.1073/pnas.0800621105.
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2008 | Book Chapter | IST-REx-ID: 3872
Chatterjee, Krishnendu, and Thomas A Henzinger. “Value Iteration.” In 25 Years in Model Checking, 5000:107–38. Springer, 2008. https://doi.org/10.1007/978-3-540-69850-0_7.
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2008 | Conference Paper | IST-REx-ID: 3873
Chatterjee, Krishnendu, Ritankar Majumdar, and Thomas A Henzinger. “Controller Synthesis with Budget Constraints,” 4981:72–86. Springer, 2008. https://doi.org/DOI: 10.1007/978-3-540-78929-1_6.
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2008 | Conference Paper | IST-REx-ID: 3874
Chatterjee, Krishnendu, Thomas A Henzinger, and Vinayak Prabhu. “Trading Infinite Memory for Uniform Randomness in Timed Games,” 4981:87–100. Springer, 2008. https://doi.org/10.1007/978-3-540-78929-1_7.
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2008 | Conference Paper | IST-REx-ID: 3875
Chatterjee, Krishnendu, Thomas A Henzinger, and Koushik Sen. “Model-Checking Omega-Regular Properties of Interval Markov Chains,” 4962:302–17. Springer, 2008. https://doi.org/10.1007/978-3-540-78499-9_22.
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2008 | Conference Paper | IST-REx-ID: 3876
Chatterjee, Krishnendu, Thomas A Henzinger, and Vinayak Prabhu. “Timed Parity Games: Complexity and Robustness,” 5215:124–40. Springer, 2008. https://doi.org/10.1007/978-3-540-85778-5_10.
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2008 | Conference Paper | IST-REx-ID: 3877
Chatterjee, Krishnendu, Thomas A Henzinger, and Barbara Jobstmann. “Environment Assumptions for Synthesis,” 5201:147–61. Schloss Dagstuhl - Leibniz-Zentrum für Informatik, 2008. https://doi.org/10.1007/978-3-540-85361-9_14.
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2008 | Conference Paper | IST-REx-ID: 3878 | OA
Chatterjee, Krishnendu, Luca De Alfaro, and Ritankar Majumdar. “The Complexity of Coverage,” 5356:91–106. Springer, 2008. https://doi.org/10.1007/978-3-540-89330-1_7.
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2008 | Conference Paper | IST-REx-ID: 3879
Chatterjee, Krishnendu, Laurent Doyen, and Thomas A Henzinger. “Quantitative Languages,” 5213:385–400. Springer, 2008. https://doi.org/10.1007/978-3-540-87531-4_28.
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2008 | Conference Paper | IST-REx-ID: 3880
Berwanger, Dietmar, Krishnendu Chatterjee, Laurent Doyen, Thomas A Henzinger, and Sangram Raje. “Strategy Construction for Parity Games with Imperfect Information,” 5201:325–39. Schloss Dagstuhl - Leibniz-Zentrum für Informatik, 2008. https://doi.org/10.1007/978-3-540-85361-9.
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2008 | Journal Article | IST-REx-ID: 3903
Ugelvig, Line V, Falko Drijfhout, Daniel Kronauer, Jacobus Boomsma, Jes Pedersen, and Sylvia Cremer. “The Introduction History of Invasive Garden Ants in Europe: Integrating Genetic, Chemical and Behavioural Approaches.” BMC Biology. BioMed Central, 2008. https://doi.org/10.1186/1741-7007-6-11.
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2008 | Journal Article | IST-REx-ID: 3905
Cremer, Sylvia, Patrizia D’Ettorre, Falko Drijfhout, Matthew Sledge, Stefano Turillazzi, and Jürgen Heinze. “Imperfect Chemical Female Mimicry in Males of the Ant Cardiocondyla Obscurior.” Naturwissenschaften. Springer, 2008. https://doi.org/10.1007/s00114-008-0430-8.
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2008 | Journal Article | IST-REx-ID: 3906
Cremer, Sylvia, Line V Ugelvig, Falko Drijfhout, Birgit Schlick Steiner, Florian Steiner, Bernhard Seifert, David Hughes, et al. “The Evolution of Invasiveness in Garden Ants.” PLoS One. Public Library of Science, 2008. https://doi.org/10.1371/journal.pone.0003838.
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2008 | Journal Article | IST-REx-ID: 3907
Suefuji, Masaki, Sylvia Cremer, Jan Oettler, and Jürgen Heinze. “Queen Number Influences the Timing of the Sexual Production in Colonies of Cardiocondyla Ants.” Biology Letters. Royal Society, The, 2008. https://doi.org/10.1098/rsbl.2008.0355.
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2008 | Journal Article | IST-REx-ID: 3939
Lämmermann, Tim, and Michael K Sixt. “The Microanatomy of T-Cell Responses.” Immunological Reviews. Wiley-Blackwell, 2008. https://doi.org/10.1111/j.1600-065X.2008.00592.x.
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2008 | Journal Article | IST-REx-ID: 3940
Lokmic, Zerina, Tim Lämmermann, Michael K Sixt, Susanna Cardell, Rupert Hallmann, and Lydia Sorokin. “The Extracellular Matrix of the Spleen as a Potential Organizer of Immune Cell Compartments.” Seminars in Immunology. Academic Press, 2008. https://doi.org/10.1016/j.smim.2007.12.009.
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2008 | Journal Article | IST-REx-ID: 3941
Lämmermann, Tim, Bernhard Bader, Susan Monkley, Tim Worbs, Roland Wedlich Söldner, Karin Hirsch, Markus Keller, et al. “Rapid Leukocyte Migration by Integrin-Independent Flowing and Squeezing.” Nature. Nature Publishing Group, 2008. https://doi.org/10.1038/nature06887.
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2008 | Journal Article | IST-REx-ID: 3942
Frommhold, David, Andreas Ludwig, M Gabriele Bixel, Alexander Zarbock, Inna Babushkina, Melitta Weissinger, Sandra Cauwenberghs, et al. “Sialyltransferase ST3Gal-IV Controls CXCR2-Mediated Firm Leukocyte Arrest during Inflammation.” The Journal of Experimental Medicine. Rockefeller University Press, 2008. https://doi.org/10.1084/jem.20070846.
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2008 | Journal Article | IST-REx-ID: 3943
Kessenbrock, Kai, Leopold Fröhlich, Michael K Sixt, Tim Lämmermann, Heiko Pfister, Andrew Bateman, Azzaq Belaaouaj, et al. “Proteinase 3 and Neutrophil Elastase Enhance Inflammation in Mice by Inactivating Antiinflammatory Progranulin.” The Journal of Clinical Investigation. American Society for Clinical Investigation, 2008. https://doi.org/10.1172/JCI34694.
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2008 | Journal Article | IST-REx-ID: 3944
Riedl, Julia, Alvaro Crevenna, Kai Kessenbrock, Jerry Yu, Dorothee Neukirchen, Michal Bista, Frank Bradke, et al. “Lifeact: A Versatile Marker to Visualize F-Actin.” Nature Methods. Nature Publishing Group, 2008. https://doi.org/10.1038/nmeth.1220.
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2008 | Journal Article | IST-REx-ID: 3945
Tripp, Christoph, Bernhard Haid, Vincent Flacher, Michael K Sixt, Hannes Peter, Julia Farkas, Robert Gschwentner, Lydia Sorokin, Nikolaus Romani, and Patrizia Stoitzner. “The Lymph Vessel Network in Mouse Skin Visualised with Antibodies against the Hyaluronan Receptor LYVE-1.” Immunobiology. Elsevier, 2008. https://doi.org/10.1016/j.imbio.2008.07.025.
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2008 | Book Chapter | IST-REx-ID: 3969
Edelsbrunner, Herbert, and John Harer. “Persistent Homology - a Survey.” In Surveys on Discrete and Computational Geometry: Twenty Years Later, 257–82. American Mathematical Society, 2008.
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2008 | Journal Article | IST-REx-ID: 3970
Dequéant, Mary, Sebastian Ahnert, Herbert Edelsbrunner, Thomas Fink, Earl Glynn, Gaye Hattem, Andrzej Kudlicki, et al. “Comparison of Pattern Detection Methods in Microarray Time Series of the Segmentation Clock.” PLoS One. Public Library of Science, 2008. https://doi.org/10.1371/journal.pone.0002856.
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2008 | Journal Article | IST-REx-ID: 3971
Edelsbrunner, Herbert, John Harer, Ajith Mascarenhas, Valerio Pascucci, and Jack Snoeyink. “Time-Varying Reeb Graphs for Continuous Space-Time Data.” Computational Geometry: Theory and Applications. Elsevier, 2008. https://doi.org/10.1016/j.comgeo.2007.11.001.
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2008 | Conference Paper | IST-REx-ID: 3974
Edelsbrunner, Herbert, John Harer, and Amit Patel. “Reeb Spaces of Piecewise Linear Mappings,” 242–50. ACM, 2008. https://doi.org/10.1145/1377676.1377720.
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2008 | Journal Article | IST-REx-ID: 4135
Storch, D., A. Šizling, J. Reif, Jitka Polechova, E. Šizlingová, and K. Gaston. “The Quest for a Null Model for Macroecological Patterns: Geometry of Species Distributions at Multiple Spatial Scales.” Ecology Letters. Wiley-Blackwell, 2008. https://doi.org/3817.
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2008 | Book Chapter | IST-REx-ID: 4137
Bridle, Jon, Jitka Polechova, and Timothy Vines. “Patterns of Biodiversity and Limits to Adaptation in Time and Space.” In Evolution and Speciation, edited by J.R. R. K. Butlin and D. Schluter, 77–101. Cambridge University Press, 2008. https://doi.org/3816.
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2008 | Journal Article | IST-REx-ID: 4141
Vervenne, Hilke, Koen Crombez, Kathleen Lambaerts, Lara Carvalho, Mathias Köppen, Carl-Philipp J Heisenberg, Wim Van De Ven, and Marleen Petit. “Lpp Is Involved in Wnt/PCP Signaling and Acts Together with Scrib to Mediate Convergence and Extension Movements during Zebrafish Gastrulation.” Developmental Biology. Elsevier, 2008. https://doi.org/10.1016/j.ydbio.2008.05.529.
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2008 | Journal Article | IST-REx-ID: 4150
Schötz, Eva, Rebecca Burdine, Frank Julicher, Malcolm Steinberg, Carl-Philipp J Heisenberg, and Ramsey Foty. “Quantitative Differences in Tissue Surface Tension Influence Zebrafish Germ Layer Positioning.” HFSP Journal. HFSP Publishing, 2008. https://doi.org/10.2976/1.2834817.
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2008 | Journal Article | IST-REx-ID: 4161
Oteíza, Pablo, Mathias Köppen, Miguel Concha, and Carl-Philipp J Heisenberg. “Origin and Shaping of the Laterality Organ in Zebrafish.” Development. Company of Biologists, 2008. https://doi.org/10.1242/dev.022228.
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2008 | Journal Article | IST-REx-ID: 4180
Krieg, Michael, Jonne Helenius, Carl-Philipp J Heisenberg, and Daniel Mueller. “A Bond for a Lifetime: Employing Membrane Nanotubes from Living Cells to Determine Receptor-Ligand Kinetics.” Angewandte Chemie - International Edition. Wiley-Blackwell, 2008. https://doi.org/10.1002/anie.200803552.
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2008 | Journal Article | IST-REx-ID: 4181
Krieg, Michael, Yohanna Arboleda Estudillo, Pierre Puech, Jos Käfer, François Graner, Daniel Mueller, and Carl-Philipp J Heisenberg. “Tensile Forces Govern Germ-Layer Organization in Zebrafish.” Nature Cell Biology. Nature Publishing Group, 2008. https://doi.org/10.1038/ncb1705.
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