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6122 Publications


2005 | Journal Article | IST-REx-ID: 2867 | OA
Developmental specificity of auxin response by pairs of ARF and Aux/IAA transcriptional regulators
D. Weijers, E. Benková, K. Jäger, A. Schlereth, T. Hamann, M. Kientz, J. Wilmoth, J. Reed, G. Jürgens, EMBO Journal 24 (2005) 1874–1885.
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2005 | Journal Article | IST-REx-ID: 2895
Immunological self tolerance: Lessons from mathematical modeling
J. Carneiro, T. Paixao, D. Milutinovic, J. Sousa, K. Leon, R. Gardner, J. Faro, Journal of Computational and Applied Mathematics 184 (2005) 77–100.
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2005 | Journal Article | IST-REx-ID: 3000
Cell polarity, auxin transport and cytoskeleton mediated division planes: Who comes first?
P. Dhonukshe, J. Kleine Vehn, J. Friml, Protoplasma 226 (2005) 67–73.
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2005 | Journal Article | IST-REx-ID: 3001
Auxin inhibits endocytosis and promotes its own efflux from cells
T. Paciorek, E. Zažímalová, N. Ruthardt, J. Petrášek, Y. Stierhof, J. Kleine Vehn, D. Morris, N. Emans, G. Jürgens, N. Geldner, J. Friml, Nature 435 (2005) 1251–1256.
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2005 | Journal Article | IST-REx-ID: 3003
Functional redundancy of PIN proteins is accompanied by auxin-dependent cross-regulation of PIN expression
A. Vieten, S. Vanneste, J. Wiśniewska, E. Benková, R. Benjamins, T. Beeckman, C. Luschnig, J. Friml, Development 132 (2005) 4521–4531.
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2005 | Journal Article | IST-REx-ID: 3004
Maintenance of embryonic auxin distribution for apical basal patterning by PIN FORMED dependent auxin transport in Arabidopsis
D. Weijers, M. Sauer, O. Meurette, J. Friml, K. Ljung, G. Sandberg, P. Hooykaas, R. Offringa, Plant Cell 17 (2005) 2517–2526.
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2005 | Journal Article | IST-REx-ID: 3141
Conformational changes in the Arp2 3 complex leading to actin nucleation
A. Rodal, O. Sokolova, D. Robins, K. Daugherty, S. Hippenmeyer, H. Riezman, N. Grigorieff, B. Goode, Nature Structural and Molecular Biology 12 (2005) 26–31.
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2005 | Journal Article | IST-REx-ID: 3143
A developmental switch in the response of DRG neurons to ETS transcription factor signaling
S. Hippenmeyer, E. Vrieseling, M. Sigrist, T. Portmann, C. Laengle, D. Ladle, S. Arber, PLoS Biology 3 (2005) 0878–0890.
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2005 | Conference Paper | IST-REx-ID: 3175
Digital tapestry
C. Rother, S. Kumar, V. Kolmogorov, A. Blake, in:, IEEE, 2005, pp. 589–596.
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2005 | Conference Paper | IST-REx-ID: 3176
Bi-layer segmentation of binocular stereo video
V. Kolmogorov, A. Criminisi, A. Blake, G. Cross, C. Rother, in:, IEEE, 2005, pp. 1186–1186.
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2005 | Conference Paper | IST-REx-ID: 3181
On the optimality of tree reweighted max product message passing
V. Kolmogorov, M. Wainwright, in:, AUAI Press, 2005, pp. 316–323.
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2005 | Conference Paper | IST-REx-ID: 3182 View | DOI
 

2005 | Conference Paper | IST-REx-ID: 3183
Bi-layer segmentation of binocular stereo video
V. Kolmogorov, A. Criminisi, A. Blake, G. Cross, C. Rother, in:, IEEE, 2005, pp. 407–414.
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2005 | Conference Paper | IST-REx-ID: 3211
Improved security analyses for CBC MACs
M. Bellare, K.Z. Pietrzak, P. Rogaway, in:, Springer, 2005, pp. 527–545.
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2005 | Conference Paper | IST-REx-ID: 3212
On the generic insecurity of the full domain hash
Y. Dodis, R. Oliveira, K.Z. Pietrzak, in:, Springer, 2005, pp. 449–466.
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2005 | Conference Paper | IST-REx-ID: 3213
Composition does not imply adaptive security
K.Z. Pietrzak, in:, Springer, 2005, pp. 55–65.
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2005 | Journal Article | IST-REx-ID: 3416 | OA
Complex stability of single proteins explored by forced unfolding experiments
H.L. Janovjak, T. Sapra, D. Mueller, Biophysical Journal 88 (2005) 37–39.
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2005 | Journal Article | IST-REx-ID: 3417
Automated alignment and pattern recognition of single-molecule force spectroscopy data
M. Kuhn, H.L. Janovjak, M. Hubain, D. Mueller, Journal of Microscopy 218 (2005) 125–132.
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2005 | Journal Article | IST-REx-ID: 3418
Hydrodynamic effects in fast AFM single molecule force measurements
H.L. Janovjak, J. Struckmeier, D. Mueller, European Biophysics Journal 34 (2005) 91–96.
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2005 | Journal Article | IST-REx-ID: 3426 | OA
Robust formation of morphogen gradients
M.T. Bollenbach, K. Kruse, P. Pantazis, M. González Gaitán, F. Jülicher, Physical Review Letters 94 (2005).
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2005 | Book Chapter | IST-REx-ID: 3433
Posterior mapping and posterior predictive distributions
J.P. Bollback, in:, R. Nielsen (Ed.), Statistical Methods in Molecular Evolution, Springer, 2005, pp. 439–462.
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2005 | Journal Article | IST-REx-ID: 3443
Complementary roles of cholecystokinin- and parvalbumin-expressing GABAergic neurons in hippocampal network oscillations
T. Klausberger, L. Marton, J. O’Neill, J. Huck, Y. Dalezios, P. Fuentealba, W. Suen, E. Papp, T. Kaneko, M. Watanabe, J.L. Csicsvari, P. Somogyi, Journal of Neuroscience 25 (2005) 9782–9793.
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2005 | Patent | IST-REx-ID: 3509 View | DOI | Download (ext.)
 

2005 | Conference Paper | IST-REx-ID: 3557
Surface tiling with differential topology
H. Edelsbrunner, in:, ACM, 2005, pp. 9–11.
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2005 | Conference Paper | IST-REx-ID: 3558
Extraction and simplification of iso-surfaces in tandem
D. Attali, D. Cohen Steiner, H. Edelsbrunner, in:, ACM, 2005, pp. 139–148.
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2005 | Book Chapter | IST-REx-ID: 3576
The geometry of biomolecular solvation
H. Edelsbrunner, P. Koehl, in:, Combinatorial and Computational Geometry, Cambridge University Press, 2005, pp. 243–275.
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2005 | Book Chapter | IST-REx-ID: 3588
Cell migration during zebrafish gastrulation
I. Castanon Ortega, C.-P.J. Heisenberg, in:, D. Wedlich (Ed.), Cell Migration in Development and Disease, Wiley-VCH, 2005, pp. 71–105.
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2005 | Book Chapter | IST-REx-ID: 3589
Cleavage and gastrulation in zebrafish embryos
M. Köppen, C.-P.J. Heisenberg, in:, Encyclopedia of Life Sciences, Wiley-Blackwell, 2005.
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2005 | Book Review | IST-REx-ID: 3590
A stern view of gastrulation
I. Castanon Ortega, C.-P.J. Heisenberg, Nature Cell Biology 7 (2005) 19–19.
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2005 | Conference Paper | IST-REx-ID: 4541
Semiperfect-information games
K. Chatterjee, T.A. Henzinger, in:, Schloss Dagstuhl - Leibniz-Zentrum für Informatik, 2005, pp. 1–18.
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2005 | Conference Paper | IST-REx-ID: 4553
The complexity of stochastic Rabin and Streett games
K. Chatterjee, L. De Alfaro, T.A. Henzinger, in:, Springer, 2005, pp. 878–890.
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2005 | Conference Paper | IST-REx-ID: 4554
Mean-payoff parity games
K. Chatterjee, T.A. Henzinger, M. Jurdziński, in:, IEEE, 2005, pp. 178–187.
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2005 | Conference Paper | IST-REx-ID: 4557
Counterexample-guided planning
K. Chatterjee, T.A. Henzinger, R. Jhala, R. Majumdar, in:, AUAI Press, 2005, pp. 104–111.
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2005 | Conference Paper | IST-REx-ID: 4560
Verifying quantitative properties using bound functions
A. Chakrabarti, K. Chatterjee, T.A. Henzinger, O. Kupferman, R. Majumdar, in:, Springer, 2005, pp. 50–64.
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2005 | Conference Paper | IST-REx-ID: 4624
Interface-based design
L. De Alfaro, T.A. Henzinger, in:, Springer, 2005, pp. 83–104.
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2005 | Journal Article | IST-REx-ID: 4625
Model checking discounted temporal properties
L. De Alfaro, M. Faella, T.A. Henzinger, R. Majumdar, M. Stoelinga, Theoretical Computer Science 345 (2005) 139–170.
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2005 | Conference Paper | IST-REx-ID: 4576
Web service interfaces
D. Beyer, A. Chakrabarti, T.A. Henzinger, in:, ACM, 2005, pp. 148–159.
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2005 | Conference Paper | IST-REx-ID: 4579
Checking memory safety with BLAST
D. Beyer, T.A. Henzinger, R. Jhala, R. Majumdar, in:, Springer, 2005, pp. 2–18.
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2005 | Journal Article | IST-REx-ID: 3720
P2Y1 receptors inhibit both strength and plasticity of glutamatergic synaptic neurotransmission in the rat prefrontal cortex.
J. Guzmán, Z. Gerevich, J. Hengstler, P. Illes, W. Kleemann, Synapse 57 (2005) 235–238.
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2005 | Journal Article | IST-REx-ID: 3721 | OA
Molecular force modulation spectroscopy revealing the dynamic response of single bacteriorhodopsins
H.L. Janovjak, D. Mueller, A. Humphris, Biophysical Journal 88 (2005) 1423–1431.
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2005 | Journal Article | IST-REx-ID: 3741 | OA
Information-based clustering
N. Slonim, G. Atwal, G. Tkačik, W. Bialek, PNAS 102 (2005) 18297–18302.
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2005 | Preprint | IST-REx-ID: 3746 | OA
Estimating mutual information and multi-information in large networks
N. Slonim, G. Atwal, G. Tkačik, W. Bialek, ArXiv (2005) 1–11.
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2005 | Journal Article | IST-REx-ID: 3753
Real-time RNA profiling within a single bacterium
T. Le, S. Harlepp, C.C. Guet, K. Dittmar, T. Emonet, T. Pan, P. Cluzel, PNAS 102 (2005) 9160–9164.
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2005 | Journal Article | IST-REx-ID: 3763
Controllable motion synthesis in a gaseous medium
L. Shi, Y. Yu, C.J. Wojtan, S. Chenney, The Visual Computer 21 (2005) 474–487.
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2005 | Journal Article | IST-REx-ID: 3808 View | DOI
 

2005 | Journal Article | IST-REx-ID: 3611
Mating patterns in a Bombina hybrid zone: Inferences from adult and full sib genotypes
B. Nürnberger, N.H. Barton, L. Kruuk, T. Vines, Heredity 94 (2005) 247–257.
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2005 | Journal Article | IST-REx-ID: 3612
Speciation and gene flow between snails of opposing chirality
A. Davison, S. Chiba, N.H. Barton, B. Clarke, PLoS Biology 3 (2005).
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2005 | Journal Article | IST-REx-ID: 3613
Genetic variation for total fitness in Drosophila melanogaster: Complex yet replicable patterns
M. Gardner, K. Fowler, N.H. Barton, L. Patridge, Genetics 169 (2005) 1553–1571.
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2005 | Conference Paper | IST-REx-ID: 3684
Oblivious document capture and real-time retrieval
C. Lampert, T. Braun, A. Ulges, D. Keysers, T. Breuel, in:, CBDAR, 2005, pp. 79–86.
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2005 | Book Review | IST-REx-ID: 3812 View | DOI
 

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