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6032 Publications


2005 | Journal Article | IST-REx-ID: 882
F. Kondrashov, “Prediction of pathogenic mutations in mitochondrially encoded human tRNAs,” Human Molecular Genetics, vol. 14, no. 16, pp. 2415–2419, 2005.
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2005 | Journal Article | IST-REx-ID: 893
I. Jordan et al., “A universal trend of amino acid gain and loss in protein evolution,” Nature, vol. 433, no. 7026, pp. 633–638, 2005.
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2005 | Journal Article | IST-REx-ID: 1298
D. Reiff et al., “In vivo performance of genetically encoded indicators of neural activity in flies,” Journal of Neuroscience, vol. 25, no. 19, pp. 4766–4778, 2005.
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2005 | Book Chapter | IST-REx-ID: 1444 | OA
T. Hausel, “Mirror symmetry and Langlands duality in the non-Abelian Hodge theory of a curve,” in Geometric Methods in Algebra and Number Theory, vol. 235, Springer, 2005, pp. 193–217.
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2005 | Journal Article | IST-REx-ID: 1447 | OA
T. Hausel, “Quaternionic geometry of matroids,” Open Mathematics, vol. 3, no. 1, pp. 26–38, 2005.
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2005 | Journal Article | IST-REx-ID: 1463 | OA
T. Hausel and N. Proudfoot, “Abelianization for hyperkähler quotients,” Topology, vol. 44, no. 1, pp. 231–248, 2005.
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2005 | Conference Paper | IST-REx-ID: 3175
C. Rother, S. Kumar, V. Kolmogorov, and A. Blake, “Digital tapestry,” presented at the CVPR: Computer Vision and Pattern Recognition, 2005, vol. 1, pp. 589–596.
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2005 | Conference Paper | IST-REx-ID: 3176
V. Kolmogorov, A. Criminisi, A. Blake, G. Cross, and C. Rother, “Bi-layer segmentation of binocular stereo video,” presented at the CVPR: Computer Vision and Pattern Recognition, 2005, pp. 1186–1186.
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2005 | Conference Paper | IST-REx-ID: 3181
V. Kolmogorov and M. Wainwright, “On the optimality of tree reweighted max product message passing,” presented at the UAI: Uncertainty in Artificial Intelligence, 2005, pp. 316–323.
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2005 | Conference Paper | IST-REx-ID: 3182
V. Kolmogorov and Y. Boykov, “What metrics can be approximated by geo cuts or global optimization of length area and flux,” presented at the ICCV: International Conference on Computer Vision, 2005, vol. 1, pp. 564–571.
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2005 | Conference Paper | IST-REx-ID: 3183
V. Kolmogorov, A. Criminisi, A. Blake, G. Cross, and C. Rother, “Bi-layer segmentation of binocular stereo video,” presented at the CVPR: Computer Vision and Pattern Recognition, 2005, vol. 2, pp. 407–414.
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2005 | Conference Paper | IST-REx-ID: 3211
M. Bellare, K. Z. Pietrzak, and P. Rogaway, “Improved security analyses for CBC MACs,” presented at the CRYPTO: International Cryptology Conference, 2005, vol. 3621, pp. 527–545.
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2005 | Conference Paper | IST-REx-ID: 3212
Y. Dodis, R. Oliveira, and K. Z. Pietrzak, “On the generic insecurity of the full domain hash,” presented at the CRYPTO: International Cryptology Conference, 2005, vol. 3621, pp. 449–466.
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2005 | Conference Paper | IST-REx-ID: 3213
K. Z. Pietrzak, “Composition does not imply adaptive security,” presented at the CRYPTO: International Cryptology Conference, 2005, vol. 3621, pp. 55–65.
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2005 | Journal Article | IST-REx-ID: 3416 | OA
H. L. Janovjak, T. Sapra, and D. Mueller, “Complex stability of single proteins explored by forced unfolding experiments,” Biophysical Journal, vol. 88, no. 5, pp. 37–39, 2005.
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2005 | Journal Article | IST-REx-ID: 3417
M. Kuhn, H. L. Janovjak, M. Hubain, and D. Mueller, “Automated alignment and pattern recognition of single-molecule force spectroscopy data,” Journal of Microscopy, vol. 218, no. 2, pp. 125–132, 2005.
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2005 | Journal Article | IST-REx-ID: 3418
H. L. Janovjak, J. Struckmeier, and D. Mueller, “Hydrodynamic effects in fast AFM single molecule force measurements,” European Biophysics Journal, vol. 34, no. 1, pp. 91–96, 2005.
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2005 | Book Chapter | IST-REx-ID: 3433
J. P. Bollback, “Posterior mapping and posterior predictive distributions,” in Statistical methods in Molecular Evolution, R. Nielsen, Ed. Springer, 2005, pp. 439–462.
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2005 | Journal Article | IST-REx-ID: 3443
T. Klausberger et al., “Complementary roles of cholecystokinin- and parvalbumin-expressing GABAergic neurons in hippocampal network oscillations,” Journal of Neuroscience, vol. 25, no. 42, pp. 9782–9793, 2005.
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2005 | Patent | IST-REx-ID: 3509
S. Williams, H. Edelsbrunner, and P. Fu, “Methods, apparatus and computer program products for modeling three-dimensional colored objects.” Elsevier, 2005.
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2005 | Conference Paper | IST-REx-ID: 3557
H. Edelsbrunner, “Surface tiling with differential topology,” presented at the SGP: Eurographics Symposium on Geometry processing, 2005, pp. 9–11.
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2005 | Conference Paper | IST-REx-ID: 3558
D. Attali, D. Cohen Steiner, and H. Edelsbrunner, “Extraction and simplification of iso-surfaces in tandem,” presented at the SGP: Eurographics Symposium on Geometry processing, 2005, pp. 139–148.
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2005 | Book Chapter | IST-REx-ID: 3576
H. Edelsbrunner and P. Koehl, “The geometry of biomolecular solvation,” in Combinatorial and Computational Geometry, vol. 52, Cambridge University Press, 2005, pp. 243–275.
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2005 | Journal Article | IST-REx-ID: 3611
B. Nürnberger, N. H. Barton, L. Kruuk, and T. Vines, “Mating patterns in a Bombina hybrid zone: Inferences from adult and full sib genotypes,” Heredity, vol. 94, no. 2, pp. 247–257, 2005.
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2005 | Journal Article | IST-REx-ID: 3612
A. Davison, S. Chiba, N. H. Barton, and B. Clarke, “Speciation and gene flow between snails of opposing chirality,” PLoS Biology, vol. 3, no. 9, 2005.
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2005 | Journal Article | IST-REx-ID: 3613
M. Gardner, K. Fowler, N. H. Barton, and L. Patridge, “Genetic variation for total fitness in Drosophila melanogaster: Complex yet replicable patterns,” Genetics, vol. 169, no. 3, pp. 1553–1571, 2005.
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2005 | Conference Paper | IST-REx-ID: 3684
C. Lampert, T. Braun, A. Ulges, D. Keysers, and T. Breuel, “Oblivious document capture and real-time retrieval,” presented at the CBDAR: Camera Based Document Analysis and Recognition , 2005, pp. 79–86.
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2005 | Conference Paper | IST-REx-ID: 3689
A. Ulges, C. Lampert, and T. Breuel, “Document image dewarping using robust estimation of curled text lines,” presented at the ICDAR: International Conference on Document Analysis and Recognition, 2005, vol. 2, pp. 1001–1005.
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2005 | Journal Article | IST-REx-ID: 3691
C. Lampert, “Boundary regularity of admissible operators,” Publicacions Matemàtiques, vol. 49, no. 1, pp. 179–195, 2005.
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2005 | Journal Article | IST-REx-ID: 3721 | OA
H. L. Janovjak, D. Mueller, and A. Humphris, “Molecular force modulation spectroscopy revealing the dynamic response of single bacteriorhodopsins,” Biophysical Journal, vol. 88, no. 2, pp. 1423–1431, 2005.
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2005 | Journal Article | IST-REx-ID: 3741 | OA
N. Slonim, G. Atwal, G. Tkacik, and W. Bialek, “Information-based clustering,” PNAS, vol. 102, no. 51, pp. 18297–18302, 2005.
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2005 | Preprint | IST-REx-ID: 3746 | OA
N. Slonim, G. Atwal, G. Tkacik, and W. Bialek, “Estimating mutual information and multi-information in large networks,” ArXiv. ArXiv, pp. 1–11, 2005.
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2005 | Journal Article | IST-REx-ID: 3753
T. Le et al., “Real-time RNA profiling within a single bacterium,” PNAS, vol. 102, no. 26, pp. 9160–9164, 2005.
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2005 | Journal Article | IST-REx-ID: 3808
D. Engel and P. M. Jonas, “Presynaptic action potential amplification by voltage-gated Na+ channels in hippocampal mossy fiber boutons,” Neuron, vol. 45, no. 3, pp. 405–17, 2005.
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2005 | Book Review | IST-REx-ID: 3812
S. Hefft and P. M. Jonas, “Asynchronous GABA release generates long-lasting inhibition at a hippocampal interneuron-principal neuron synapse (Review),” Nature Neuroscience, vol. 8, no. 10. Nature Publishing Group, pp. 1319–28, 2005.
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2005 | Conference Paper | IST-REx-ID: 3892
K. Chatterjee, T. A. Henzinger, and M. Jurdziński, “Games with secure equilibria,” presented at the FMCO: Formal Methods for Components and Objects, 2005, vol. 3657, pp. 141–161.
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2005 | Conference Paper | IST-REx-ID: 3893
K. Chatterjee, “Two-player nonzero-sum ω-regular games,” presented at the CONCUR: Concurrency Theory, 2005, vol. 3653, pp. 413–427.
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2005 | Conference Paper | IST-REx-ID: 3896
K. Chatterjee, P. Dasgupta, and P. Chakrabarti, “Complexity of compositional model checking of computation tree logic on simple structures,” presented at the IWDC: International Workshop on Distributed Computing , 2005, vol. 3326, pp. 89–102.
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2005 | Conference Paper | IST-REx-ID: 3902
S. Cremer and J. Boomsma, “The drawback of mobility: invasive species in a globalised world,” presented at the Marie Curie Conference, 2005.
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2005 | Journal Article | IST-REx-ID: 3426 | OA
M. T. Bollenbach, K. Kruse, P. Pantazis, M. González Gaitán, and F. Jülicher, “Robust formation of morphogen gradients,” Physical Review Letters, vol. 94, no. 1, 2005.
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2005 | Book Chapter | IST-REx-ID: 3589
M. Köppen and C.-P. J. Heisenberg, “Cleavage and gastrulation in zebrafish embryos,” in Encyclopedia of Life Sciences, Wiley-Blackwell, 2005.
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2005 | Book Chapter | IST-REx-ID: 3588
I. Castanon Ortega and C.-P. J. Heisenberg, “Cell migration during zebrafish gastrulation,” in Cell Migration in Development and Disease, D. Wedlich, Ed. Wiley-VCH, 2005, pp. 71–105.
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2005 | Journal Article | IST-REx-ID: 3720
J. Guzmán, Z. Gerevich, J. Hengstler, P. Illes, and W. Kleemann, “P2Y1 receptors inhibit both strength and plasticity of glutamatergic synaptic neurotransmission in the rat prefrontal cortex.,” Synapse, vol. 57, no. 4, pp. 235–238, 2005.
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2005 | Book Review | IST-REx-ID: 3590
I. Castanon Ortega and C.-P. J. Heisenberg, “A stern view of gastrulation,” Nature Cell Biology, vol. 7, no. 1. Nature Publishing Group, pp. 19–19, 2005.
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2005 | Journal Article | IST-REx-ID: 3763
L. Shi, Y. Yu, C. J. Wojtan, and S. Chenney, “Controllable motion synthesis in a gaseous medium,” The Visual Computer, vol. 21, no. 7, pp. 474–487, 2005.
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2005 | Journal Article | IST-REx-ID: 4144
F. Ulrich et al., “Wnt11 functions in gastrulation by controlling cell cohesion through Rab5c and E-cadherin,” Developmental Cell, vol. 9, no. 4, pp. 555–564, 2005.
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2005 | Journal Article | IST-REx-ID: 4155
P. Puech, A. Taubenberger, F. Ulrich, M. Krieg, D. Mueller, and C.-P. J. Heisenberg, “Measuring cell adhesion forces of primary gastrulating cells from zebrafish using atomic force microscopy,” Journal of Cell Science, vol. 118, no. 18, pp. 4199–4206, 2005.
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2005 | Journal Article | IST-REx-ID: 4167
W. Norton et al., “Monorail/Foxa2 regulates floorplate differentiation and specification of oligodendrocytes, serotonergic raphe neurones and cranial motoneurones,” Development, vol. 132, no. 4, pp. 645–658, 2005.
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2005 | Journal Article | IST-REx-ID: 4171
J. Montero, L. Carvalho, M. Wilsch Bräuninger, B. Kilian, C. Mustafa, and C.-P. J. Heisenberg, “Shield formation at the onset of zebrafish gastrulation,” Development, vol. 132, no. 6, pp. 1187–1198, 2005.
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2005 | Journal Article | IST-REx-ID: 4183
M. Köppen, B. Fernández, L. Carvalho, A. Jacinto, and C.-P. J. Heisenberg, “Misshapen mediates actin-based cell contraction during zebrafish epiboly and Drosophila dorsal closure,” Mechanisms of Development, vol. 122, no. Supplement 1, pp. S112–S113, 2005.
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