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7210 Publications
2010 | Journal Article | IST-REx-ID: 2899
Within host competition selects for plasmid encoded toxin–antitoxin systems
T. Cooper, T. Paixao, J. Heinemann, Proc R Soc B 277 (2010) 3149–3155.
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| DOI
T. Cooper, T. Paixao, J. Heinemann, Proc R Soc B 277 (2010) 3149–3155.
2010 | Conference Paper | IST-REx-ID: 2934
Generalized roof duality and bisubmodular functions
V. Kolmogorov, in:, Neural Information Processing Systems, 2010.
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V. Kolmogorov, in:, Neural Information Processing Systems, 2010.
2010 | Conference Paper | IST-REx-ID: 2978 | 
Efficiency Limitations for Σ-Protocols for Group Homomorphisms
E. Bangerter, J. Camenisch, S. Krenn, in:, D. Micciancio (Ed.), Springer, 2010, pp. 553–571.
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E. Bangerter, J. Camenisch, S. Krenn, in:, D. Micciancio (Ed.), Springer, 2010, pp. 553–571.
2010 | Conference Paper | IST-REx-ID: 2979 |
A Certifying Compiler for Zero-Knowledge Proofs of Knowledge Based on Sigma-Protocols
J. Almeida, E. Bangerter, M. Barbosa, S. Krenn, A. Sadeghi, T. Schneider, in:, D. Gritzalis, B. Preneel, M. Theoharidou (Eds.), Springer, 2010, pp. 151–167.
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J. Almeida, E. Bangerter, M. Barbosa, S. Krenn, A. Sadeghi, T. Schneider, in:, D. Gritzalis, B. Preneel, M. Theoharidou (Eds.), Springer, 2010, pp. 151–167.
2010 | Conference Paper | IST-REx-ID: 2980 |
Automatic Generation of Sigma-Protocols
E. Bangerter, T. Briner, W. Henecka, S. Krenn, A. Sadeghi, T. Schneider, in:, F. Martinelli, B. Preneel (Eds.), Springer, 2010, pp. 67–82.
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E. Bangerter, T. Briner, W. Henecka, S. Krenn, A. Sadeghi, T. Schneider, in:, F. Martinelli, B. Preneel (Eds.), Springer, 2010, pp. 67–82.
2010 | Journal Article | IST-REx-ID: 3062
A Rho scaffold integrates the secretory system with feedback mechanisms in regulation of auxin distribution
O. Hazak, D. Bloch, L. Poraty, H. Sternberg, J. Zhang, J. Friml, S. Yalovsky, PLoS Biology 8 (2010).
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O. Hazak, D. Bloch, L. Poraty, H. Sternberg, J. Zhang, J. Friml, S. Yalovsky, PLoS Biology 8 (2010).
2010 | Journal Article | IST-REx-ID: 3063
Subcellular trafficking of PIN auxin efflux carriers in auxin transport
J. Friml, European Journal of Cell Biology 89 (2010) 231–235.
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J. Friml, European Journal of Cell Biology 89 (2010) 231–235.
2010 | Journal Article | IST-REx-ID: 3064
PIN phosphorylation is sufficient to mediate PIN polarity and direct auxin transport
J. Zhang, T. Nodzyński, A. Pěnčík, J. Rolčík, J. Friml, PNAS 107 (2010) 918–922.
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J. Zhang, T. Nodzyński, A. Pěnčík, J. Rolčík, J. Friml, PNAS 107 (2010) 918–922.
2010 | Journal Article | IST-REx-ID: 3065
Role of PIN-mediated auxin efflux in apical hook development of Arabidopsis thaliana
P. Žádníková, J. Petrášek, P. Marhavý, V. Raz, F. Vandenbussche, Z. Ding, K. Schwarzerová, M. Morita, M. Tasaka, J. Hejátko, D. Van Der Straeten, J. Friml, E. Benková, Development 137 (2010) 607–617.
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P. Žádníková, J. Petrášek, P. Marhavý, V. Raz, F. Vandenbussche, Z. Ding, K. Schwarzerová, M. Morita, M. Tasaka, J. Hejátko, D. Van Der Straeten, J. Friml, E. Benková, Development 137 (2010) 607–617.
2010 | Journal Article | IST-REx-ID: 3066
Trafficking to the outer polar domain defines the root soil interface
Ł. Łangowski, K. Růžička, S. Naramoto, J. Kleine Vehn, J. Friml, Current Biology 20 (2010) 904–908.
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Ł. Łangowski, K. Růžička, S. Naramoto, J. Kleine Vehn, J. Friml, Current Biology 20 (2010) 904–908.
2010 | Journal Article | IST-REx-ID: 3067
Probing plant membranes with FM dyes: Tracking dragging or blocking?
A. Jelínková, K. Malínská, S. Simon, J. Kleine Vehn, M. Pařezová, P. Pejchar, M. Kubeš, J. Martinec, J. Friml, E. Zažímalová, J. Petrášek, Plant Journal 61 (2010) 883–892.
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A. Jelínková, K. Malínská, S. Simon, J. Kleine Vehn, M. Pařezová, P. Pejchar, M. Kubeš, J. Martinec, J. Friml, E. Zažímalová, J. Petrášek, Plant Journal 61 (2010) 883–892.
2010 | Journal Article | IST-REx-ID: 3068
Arabidopsis PIS1 encodes the ABCG37 transporter of auxinic compounds including the auxin precursor indole 3 butyric acid
K. Růžička, L. Strader, A. Bailly, H. Yang, J. Blakeslee, Ł. Łangowski, E. Nejedlá, H. Fujita, H. Itoh, K. Syōno, J. Hejátko, W. Gray, E. Martinoia, M. Geisler, B. Bartel, A. Murphy, J. Friml, PNAS 107 (2010) 10749–10753.
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K. Růžička, L. Strader, A. Bailly, H. Yang, J. Blakeslee, Ł. Łangowski, E. Nejedlá, H. Fujita, H. Itoh, K. Syōno, J. Hejátko, W. Gray, E. Martinoia, M. Geisler, B. Bartel, A. Murphy, J. Friml, PNAS 107 (2010) 10749–10753.
2010 | Journal Article | IST-REx-ID: 3069
Auxin regulates distal stem cell differentiation in Arabidopsis roots
Z. Ding, J. Friml, PNAS 107 (2010) 12046–12051.
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Z. Ding, J. Friml, PNAS 107 (2010) 12046–12051.
2010 | Journal Article | IST-REx-ID: 3070
The GATA factor HANABA TARANU is required to position the proembryo boundary in the early Arabidopsis embryo
T. Nawy, M. Bayer, J. Mravec, J. Friml, K. Birnbaum, W. Lukowitz, Developmental Cell 19 (2010) 103–113.
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| DOI
T. Nawy, M. Bayer, J. Mravec, J. Friml, K. Birnbaum, W. Lukowitz, Developmental Cell 19 (2010) 103–113.
2010 | Journal Article | IST-REx-ID: 3071
The AP 3 β adaptin mediates the biogenesis and function of lytic vacuoles in Arabidopsis
E. Feraru, T. Paciorek, M. Feraru, M. Zwiewka, R. De Groodt, R. De Rycke, J. Kleine Vehn, J. Friml, Plant Cell 22 (2010) 2812–2824.
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| DOI
E. Feraru, T. Paciorek, M. Feraru, M. Zwiewka, R. De Groodt, R. De Rycke, J. Kleine Vehn, J. Friml, Plant Cell 22 (2010) 2812–2824.
2010 | Journal Article | IST-REx-ID: 3072 |
The march of the PINs: Developmental plasticity by dynamic polar targeting in plant cells
W. Grunewald, J. Friml, EMBO Journal 29 (2010) 2700–2714.
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| PubMed | Europe PMC
W. Grunewald, J. Friml, EMBO Journal 29 (2010) 2700–2714.
2010 | Journal Article | IST-REx-ID: 3073
Plasma membrane-bound AGC3 kinases phosphorylate PIN auxin carriers at TPRXS(N/S) motifs to direct apical PIN recycling
P. Dhonukshe, F. Huang, C. Galván Ampudia, A. Mähönen, J. Kleine Vehn, J. Xu, A. Quint, K. Prasad, J. Friml, B. Scheres, R. Offringa, Development 137 (2010) 3245–3255.
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P. Dhonukshe, F. Huang, C. Galván Ampudia, A. Mähönen, J. Kleine Vehn, J. Xu, A. Quint, K. Prasad, J. Friml, B. Scheres, R. Offringa, Development 137 (2010) 3245–3255.
2010 | Journal Article | IST-REx-ID: 3074
Arabidopsis ROOT UVB SENSITIVE2 WEAK AUXIN RESPONSE1 is required for polar auxin transport
L. Ge, W. Peer, S. Robert, R. Swarup, S. Ye, M. Prigge, J. Cohen, J. Friml, A. Murphy, D. Tang, M. Estelle, Plant Cell 22 (2010) 1749–1761.
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L. Ge, W. Peer, S. Robert, R. Swarup, S. Ye, M. Prigge, J. Cohen, J. Friml, A. Murphy, D. Tang, M. Estelle, Plant Cell 22 (2010) 1749–1761.
2010 | Journal Article | IST-REx-ID: 3075
ABP1 mediates auxin inhibition of clathrin-dependent endocytosis in Arabidopsis
S. Robert, J. Kleine Vehn, E. Barbez, M. Sauer, T. Paciorek, P. Baster, S. Vanneste, J. Zhang, S. Simon, M. Čovanová, K. Hayashi, P. Dhonukshe, Z. Yang, S. Bednarek, A. Jones, C. Luschnig, F. Aniento, E. Zažímalová, J. Friml, Cell 143 (2010) 111–121.
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S. Robert, J. Kleine Vehn, E. Barbez, M. Sauer, T. Paciorek, P. Baster, S. Vanneste, J. Zhang, S. Simon, M. Čovanová, K. Hayashi, P. Dhonukshe, Z. Yang, S. Bednarek, A. Jones, C. Luschnig, F. Aniento, E. Zažímalová, J. Friml, Cell 143 (2010) 111–121.
2010 | Journal Article | IST-REx-ID: 3076
Cell surface- and Rho GTPase-based auxin signaling controls cellular interdigitation in Arabidopsis
T. Xu, M. Wen, S. Nagawa, Y. Fu, J. Chen, M. Wu, C. Perrot Rechenmann, J. Friml, A. Jones, Z. Yang, Cell 143 (2010) 99–110.
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T. Xu, M. Wen, S. Nagawa, Y. Fu, J. Chen, M. Wu, C. Perrot Rechenmann, J. Friml, A. Jones, Z. Yang, Cell 143 (2010) 99–110.
2010 | Journal Article | IST-REx-ID: 3077 |
Endoplasmic reticulum: The rising compartment in auxin biology
J. Friml, A. Jones, Plant Physiology 154 (2010) 458–462.
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| PubMed | Europe PMC
J. Friml, A. Jones, Plant Physiology 154 (2010) 458–462.
2010 | Book Chapter | IST-REx-ID: 3078
Immunolocalization of proteins in plants
M. Sauer, J. Friml, in:, L. Hennig, C. Köhler (Eds.), Plant Developmental Biology, Humana Press, 2010, pp. 253–263.
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M. Sauer, J. Friml, in:, L. Hennig, C. Köhler (Eds.), Plant Developmental Biology, Humana Press, 2010, pp. 253–263.
2010 | Journal Article | IST-REx-ID: 3079
Emergence of tissue polarization from synergy of intracellular and extracellular auxin signaling
K.T. Wabnik, J. Kleine Vehn, J. Balla, M. Sauer, S. Naramoto, V. Reinöhl, R. Merks, W. Govaerts, J. Friml, Molecular Systems Biology 6 (2010).
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K.T. Wabnik, J. Kleine Vehn, J. Balla, M. Sauer, S. Naramoto, V. Reinöhl, R. Merks, W. Govaerts, J. Friml, Molecular Systems Biology 6 (2010).
2010 | Journal Article | IST-REx-ID: 3080
Gravity induced PIN transcytosis for polarization of auxin fluxes in gravity sensing root cells
J. Kleine Vehn, Z. Ding, A. Jones, M. Tasaka, M. Morita, J. Friml, PNAS 107 (2010) 22344–22349.
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J. Kleine Vehn, Z. Ding, A. Jones, M. Tasaka, M. Morita, J. Friml, PNAS 107 (2010) 22344–22349.
2010 | Journal Article | IST-REx-ID: 3081
ADP ribosylation factor machinery mediates endocytosis in plant cells
S. Naramoto, J. Kleine Vehn, S. Robert, M. Fujimoto, T. Dainobu, T. Paciorek, T. Ueda, A. Nakano, M. Van Montagu, H. Fukuda, J. Friml, PNAS 107 (2010) 21890–21895.
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S. Naramoto, J. Kleine Vehn, S. Robert, M. Fujimoto, T. Dainobu, T. Paciorek, T. Ueda, A. Nakano, M. Van Montagu, H. Fukuda, J. Friml, PNAS 107 (2010) 21890–21895.
2010 | Journal Article | IST-REx-ID: 3146
Genetic mosaic dissection of Lis1 and Ndel1 in neuronal migration
S. Hippenmeyer, Y. Youn, H. Moon, K. Miyamichi, H. Zong, A. Wynshaw Boris, L. Luo, Neuron 68 (2010) 695–709.
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S. Hippenmeyer, Y. Youn, H. Moon, K. Miyamichi, H. Zong, A. Wynshaw Boris, L. Luo, Neuron 68 (2010) 695–709.
2010 | Journal Article | IST-REx-ID: 3153
RhoL controls invasion and Rap1 localization during immune cell transmigration in Drosophila
D.E. Siekhaus, M. Haesemeyer, O. Moffitt, R. Lehmann, Nature Cell Biology 12 (2010) 605–610.
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D.E. Siekhaus, M. Haesemeyer, O. Moffitt, R. Lehmann, Nature Cell Biology 12 (2010) 605–610.
2010 | Conference Paper | IST-REx-ID: 3201
Cosegmentation revisited: Models and optimization
S. Vicente, V. Kolmogorov, C. Rother, in:, Springer, 2010, pp. 465–479.
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S. Vicente, V. Kolmogorov, C. Rother, in:, Springer, 2010, pp. 465–479.
2010 | Journal Article | IST-REx-ID: 3202
A faster algorithm for computing the principal sequence of partitions of a graph
V. Kolmogorov, Algorithmica 56 (2010) 394–412.
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V. Kolmogorov, Algorithmica 56 (2010) 394–412.
2010 | Conference Paper | IST-REx-ID: 3233
An efficient parallel repetition theorem
J. Håstad, R. Pass, D. Wikström, K.Z. Pietrzak, in:, Springer, 2010, pp. 1–18.
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J. Håstad, R. Pass, D. Wikström, K.Z. Pietrzak, in:, Springer, 2010, pp. 1–18.
2010 | Conference Paper | IST-REx-ID: 3234
Leakage resilient signatures
S. Faust, E. Kiltz, K.Z. Pietrzak, G. Rothblum, in:, Springer, 2010, pp. 343–360.
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S. Faust, E. Kiltz, K.Z. Pietrzak, G. Rothblum, in:, Springer, 2010, pp. 343–360.
2010 | Conference Paper | IST-REx-ID: 3235
Leakage resilient pseudorandom functions and side channel attacks on feistel networks
Y. Dodis, K.Z. Pietrzak, in:, Springer, 2010, pp. 21–40.
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Y. Dodis, K.Z. Pietrzak, in:, Springer, 2010, pp. 21–40.
2010 | Conference Paper | IST-REx-ID: 3237
Leakage resilient ElGamal encryption
E. Kiltz, K.Z. Pietrzak, in:, Springer, 2010, pp. 595–612.
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E. Kiltz, K.Z. Pietrzak, in:, Springer, 2010, pp. 595–612.
2010 | Journal Article | IST-REx-ID: 3294
Post eclosion odor experience modifies olfactory receptor neuron coding in Drosophila
A. Iyengar, S. Chakraborty Tuhin, S. Goswami, C. Wu, O. Siddiqi, PNAS 107 (2010) 9855–60.
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| DOI
A. Iyengar, S. Chakraborty Tuhin, S. Goswami, C. Wu, O. Siddiqi, PNAS 107 (2010) 9855–60.
2010 | Thesis | IST-REx-ID: 3296
Animating physical phenomena with embedded surface meshes
C.J. Wojtan, Animating Physical Phenomena with Embedded Surface Meshes, Georgia Institute of Technology, 2010.
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C.J. Wojtan, Animating Physical Phenomena with Embedded Surface Meshes, Georgia Institute of Technology, 2010.
2010 | Journal Article | IST-REx-ID: 3303 |
The rate of fitness-valley crossing in sexual populations
D. Weissman, M. Feldman, D. Fisher, Genetics 186 (2010) 1389–1410.
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D. Weissman, M. Feldman, D. Fisher, Genetics 186 (2010) 1389–1410.
2010 | Journal Article | IST-REx-ID: 3306 |
Commuting birth and death processes
S. Evans, B. Sturmfels, C. Uhler, The Annals of Applied Probability 20 (2010) 238–266.
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S. Evans, B. Sturmfels, C. Uhler, The Annals of Applied Probability 20 (2010) 238–266.
2010 | Journal Article | IST-REx-ID: 3308 |
Multivariate Gaussians, semidefinite matrix completion, and convex algebraic geometry
B. Sturmfels, C. Uhler, Annals of the Institute of Statistical Mathematics 62 (2010) 603–638.
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B. Sturmfels, C. Uhler, Annals of the Institute of Statistical Mathematics 62 (2010) 603–638.
2010 | Journal Article | IST-REx-ID: 3402
Model checking transactional memories
R. Guerraoui, T.A. Henzinger, V. Singh, Distributed Computing 22 (2010) 129–145.
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R. Guerraoui, T.A. Henzinger, V. Singh, Distributed Computing 22 (2010) 129–145.
2010 | Book Review | IST-REx-ID: 3403
Rate remapping: When the code goes beyond space (preview)
B. Pleydell Bouverie, J.L. Csicsvari, Neuron 68 (2010) 1015–1016.
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B. Pleydell Bouverie, J.L. Csicsvari, Neuron 68 (2010) 1015–1016.
2010 | Book Review | IST-REx-ID: 3406
Pharmacology of ionotropic glutamate receptors: a structural perspective
P. Stawski, H.L. Janovjak, D. Trauner, Bioorganic and Medicinal Chemistry 18 (2010) 7759–7772.
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P. Stawski, H.L. Janovjak, D. Trauner, Bioorganic and Medicinal Chemistry 18 (2010) 7759–7772.
2010 | Journal Article | IST-REx-ID: 3407
A light-gated, potassium-selective glutamate receptor for the optical inhibition of neuronal firing
H.L. Janovjak, S. Szobota, C. Wyart, D. Trauner, E. Isacoff, Nature Neuroscience 13 (2010) 1027–1032.
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| DOI
H.L. Janovjak, S. Szobota, C. Wyart, D. Trauner, E. Isacoff, Nature Neuroscience 13 (2010) 1027–1032.
2010 | Journal Article | IST-REx-ID: 8472
Quantitative analysis of protein backbone dynamics in microcrystalline ubiquitin by solid-state NMR spectroscopy
P. Schanda, B.H. Meier, M. Ernst, Journal of the American Chemical Society 132 (2010) 15957–15967.
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| DOI
P. Schanda, B.H. Meier, M. Ernst, Journal of the American Chemical Society 132 (2010) 15957–15967.
2010 | Journal Article | IST-REx-ID: 8473
Native-unlike long-lived intermediates along the folding pathway of the amyloidogenic protein β2-Microglobulin revealed by real-time two-dimensional NMR
A. Corazza, E. Rennella, P. Schanda, M.C. Mimmi, T. Cutuil, S. Raimondi, S. Giorgetti, F. Fogolari, P. Viglino, L. Frydman, M. Gal, V. Bellotti, B. Brutscher, G. Esposito, Journal of Biological Chemistry 285 (2010) 5827–5835.
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A. Corazza, E. Rennella, P. Schanda, M.C. Mimmi, T. Cutuil, S. Raimondi, S. Giorgetti, F. Fogolari, P. Viglino, L. Frydman, M. Gal, V. Bellotti, B. Brutscher, G. Esposito, Journal of Biological Chemistry 285 (2010) 5827–5835.
2010 | Book Chapter | IST-REx-ID: 8506
Prevalence
B.R. Hunt, V. Kaloshin, in:, Handbook of Dynamical Systems, Elsevier, 2010, pp. 43–87.
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B.R. Hunt, V. Kaloshin, in:, Handbook of Dynamical Systems, Elsevier, 2010, pp. 43–87.
2010 | Conference Paper | IST-REx-ID: 8507
Almost dense orbit on energy surface
V. Kaloshin, K. ZHANG, Y. ZHENG, in:, XVIth International Congress on Mathematical Physics, World Scientific, 2010, pp. 314–322.
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V. Kaloshin, K. ZHANG, Y. ZHENG, in:, XVIth International Congress on Mathematical Physics, World Scientific, 2010, pp. 314–322.
2010 | Journal Article | IST-REx-ID: 857
Sequence space and the ongoing expansion of the protein universe
I. Povolotskaya, F. Kondrashov, Nature 465 (2010) 922–926.
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I. Povolotskaya, F. Kondrashov, Nature 465 (2010) 922–926.
2010 | Journal Article | IST-REx-ID: 862
Compensatory evolution in mitochondrial tRNAs navigates valleys of low fitness
M. Meer, A. Kondrashov, Y. Artzy Randrup, F. Kondrashov, Nature 464 (2010) 279–282.
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| DOI
M. Meer, A. Kondrashov, Y. Artzy Randrup, F. Kondrashov, Nature 464 (2010) 279–282.
2010 | Journal Article | IST-REx-ID: 474
A new model for extinction and recolonization in two dimensions: Quantifying phylogeography
N.H. Barton, J. Kelleher, A. Etheridge, Evolution 64 (2010) 2701–2715.
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| DOI
N.H. Barton, J. Kelleher, A. Etheridge, Evolution 64 (2010) 2701–2715.
2010 | Conference Paper | IST-REx-ID: 488 |
Expressiveness of streaming string transducers
R. Alur, P. Cerny, in:, Schloss Dagstuhl - Leibniz-Zentrum für Informatik, 2010, pp. 1–12.
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R. Alur, P. Cerny, in:, Schloss Dagstuhl - Leibniz-Zentrum für Informatik, 2010, pp. 1–12.