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6749 Publications


2009 | Journal Article | IST-REx-ID: 3952
Schymeinsky, J., Gerstl, R., Mannigel, I., Niedung, K., Frommhold, D., Panthel, K., … Walzog, B. (2009). A fundamental role of mAbp1 in neutrophils: impact on β(2) integrin-mediated phagocytosis and adhesion in vivo. Blood. American Society of Hematology. https://doi.org/10.1182/blood-2009-02-206169
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2009 | Journal Article | IST-REx-ID: 3953
Wolf, A., Eller, K., Zeiser, R., Dürr, C., Gerlach, U., Sixt, M. K., … Wolf, D. (2009). The sphingosine 1-phosphate receptor agonist FTY720 potently inhibits regulatory T cell proliferation in vitro and in vivo. Journal of Immunology. American Association of Immunologists. https://doi.org/10.4049/jimmunol.0901011
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2009 | Journal Article | IST-REx-ID: 3954
Renkawitz, J., Schumann, K., Weber, M., Lämmermann, T., Pflicke, H., Piel, M., … Sixt, M. K. (2009). Adaptive force transmission in amoeboid cell migration. Nature Cell Biology. Nature Publishing Group. https://doi.org/10.1038/ncb1992
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2009 | Journal Article | IST-REx-ID: 3955
Pflicke, H., & Sixt, M. K. (2009). Preformed portals facilitate dendritic cell entry into afferent lymphatic vessels. The Journal of Experimental Medicine. Rockefeller University Press. https://doi.org/10.1084/jem.20091739
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2009 | Journal Article | IST-REx-ID: 3966
Cohen Steiner, D., Edelsbrunner, H., & Harer, J. (2009). Extending persistence using Poincare and Lefschetz duality. Foundations of Computational Mathematics. Springer. https://doi.org/10.1007/s10208-008-9027-z
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2009 | Conference Paper | IST-REx-ID: 3967
Cohen Steiner, D., Edelsbrunner, H., Harer, J., & Morozov, D. (2009). Persistent homology for kernels, images, and cokernels (pp. 1011–1020). Presented at the SODA: Symposium on Discrete Algorithms, SIAM.
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2009 | Conference Paper | IST-REx-ID: 3968 | OA
Edelsbrunner, H., & Harer, J. (2009). The persistent Morse complex segmentation of a 3-manifold (Vol. 5903, pp. 36–50). Presented at the 3DPH: Modelling the Physiological Human, Zermatt, Switzerland: Springer. https://doi.org/10.1007/978-3-642-10470-1_4
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2009 | Journal Article | IST-REx-ID: 4136 | OA
Polechova, J., Barton, N. H., & Marion, G. (2009). Species’ range: Adaptation in space and time. American Naturalist. University of Chicago Press. https://doi.org/10.1086/605958
View | Files available | DOI | Download Published Version (ext.) | PubMed | Europe PMC
 

2009 | Journal Article | IST-REx-ID: 4143
Ulrich, F., & Heisenberg, C.-P. J. (2009). Trafficking and cell migration. Traffic. Wiley-Blackwell. https://doi.org/10.1111/j.1600-0854.2009.00929.x
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2009 | Journal Article | IST-REx-ID: 4149
Soete, G., & Heisenberg, C.-P. J. (2009). The role of the extracellular matrix in Kupffer’s vesicle formation in zebrafish. Mechanisms of Development. Elsevier. https://doi.org/10.1016/j.mod.2009.06.391
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2009 | Journal Article | IST-REx-ID: 4158
Paluch, E., & Heisenberg, C.-P. J. (2009). Biology and physics of cell shape changes in development. Current Biology. Cell Press. https://doi.org/10.1016/j.cub.2009.07.029
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2009 | Journal Article | IST-REx-ID: 4159
Paluch, E., & Heisenberg, C.-P. J. (2009). Chaos begets order: Asynchronous cell contractions drive epithelial morphogenesis. Developmental Cell. Cell Press. https://doi.org/10.1016/j.devcel.2008.12.011
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2009 | Journal Article | IST-REx-ID: 4160
Oteíza, P., Lemus, C., Köppen, M., Palma, K., Krieg, M., Melo, C., … Concha, M. (2009). Linking organ formation to left-right patterning in the embryonic zebrafish. Mechanisms of Development. Elsevier. https://doi.org/10.1016/j.mod.2009.06.970
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2009 | Journal Article | IST-REx-ID: 4162
Oteíza, P., Köppen, M., Krieg, M., Preibisch, S., Haertel, S., Müller, D., … Concha, M. (2009). Wnt11/Pk1a-mediated planar cell polarity signalling orchestrates epithelial organ morphogenesis by regulating N-cadherin dependent cell adhesion forces. Mechanisms of Development. Elsevier. https://doi.org/10.1016/j.mod.2009.06.098
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2009 | Journal Article | IST-REx-ID: 4165
Oates, A., Gorfinkiel, N., Gonzalez Gaitan, M., & Heisenberg, C.-P. J. (2009). Quantitative approaches in developmental biology. Nature Reviews Genetics. Nature Publishing Group. https://doi.org/10.1038/nrg2548
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2009 | Journal Article | IST-REx-ID: 4192
Kai, M., Buchan, N., Heisenberg, C.-P. J., & Tada, M. (2009). Regulation of planar cell polarity signalling by the prenylation pathway. Mechanisms of Development. Elsevier. https://doi.org/10.1016/j.mod.2009.06.269
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2009 | Journal Article | IST-REx-ID: 4206
Heisenberg, C.-P. J. (2009). Dorsal closure in Drosophila: cells cannot get out of the tight spot. Bioessays : News and Reviews in Molecular, Cellular and Developmental Biology. Wiley-Blackwell. https://doi.org/10.1002/bies.200900109
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2009 | Journal Article | IST-REx-ID: 4217
Carvalho, L., Stuehmer, J., Bois, J., Kalaidzidis, Y., Lecaudey, V., & Heisenberg, C.-P. J. (2009). Control of convergent yolk syncytial layer nuclear movement in zebrafish. Development. Company of Biologists. https://doi.org/10.1242/dev.026922
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2009 | Journal Article | IST-REx-ID: 4223
Swoboda, J., Meredith, T., Campbell, J., Brown, S., Suzuki, T., Bollenbach, M. T., … Walker, S. (2009). Discovery of a Small Molecule that Blocks Wall Teichoic Acid Biosynthesis in Staphylococcus aureus. ACS Chemical Biology. American Chemical Society. https://doi.org/10.1021/cb900151k
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2009 | Journal Article | IST-REx-ID: 4228
Bollenbach, T., Quan, S., Chait, R. P., & Kishony, R. (2009). Nonoptimal Microbial Response to Antibiotics Underlies Suppressive Drug Interactions. Cell. Cell Press. https://doi.org/10.1016/j.cell.2009.10.025
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2009 | Journal Article | IST-REx-ID: 4231
Barton, N. H., & De Vladar, H. (2009). Statistical mechanics and the evolution of polygenic quantitative traits. Genetics. Genetics Society of America. https://doi.org/10.1534/genetics.108.099309
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2009 | Thesis | IST-REx-ID: 4232
de Vladar, H. (2009). Stochasticity and Variability in the dynamics and genetics of populations. Faculty of mathematical and natural sciences, University of Groningen. https://doi.org/3811
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2009 | Journal Article | IST-REx-ID: 4242 | OA
Barton, N. H., & De Cara, M. (2009). The evolution of strong reproductive isolation. Evolution; International Journal of Organic Evolution. Wiley. https://doi.org/10.1111/j.1558-5646.2009.00622.x
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2009 | Journal Article | IST-REx-ID: 4357
Bollback, J. P., & Huelsenbeck, J. (2009). Parallel genetic evolution within and between bacteriophage species of varying degrees of divergence. Genetics. Genetics Society of America. https://doi.org/10.1534/genetics.107.085225
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2009 | Conference Paper | IST-REx-ID: 4360
Wies, T., Piskac, R., & Kuncak, V. (2009). Combining Theories with Shared Set Operations (pp. 366–382). Presented at the FroCoS: Frontiers of Combining Systems, Springer. https://doi.org/1558
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2009 | Thesis | IST-REx-ID: 4363
Singh, V. (2009). Formalizing and Verifying Transactional Memories. Formalizing and Verifying Transactional Memories. EPFL Lausanne.
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2009 | Conference Paper | IST-REx-ID: 4365
Seghir, M., Podelski, A., & Wies, T. (2009). Abstraction Refinement for Quantified Array Assertions (pp. 3–18). Presented at the SAS: Static Analysis Symposium, Springer. https://doi.org/1556
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2009 | Conference Paper | IST-REx-ID: 4375
Lahiri, S., Qadeer, S., Galeotti, J., Voung, J., & Wies, T. (2009). Intra-module Inference (pp. 493–508). Presented at the CAV: Computer Aided Verification, Springer. https://doi.org/1555
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2009 | Conference Paper | IST-REx-ID: 4376
Lublinerman, R., Chaudhuri, S., & Cerny, P. (2009). Parallel programming with object assemblies (pp. 61–80). Presented at the Oopsla Object Oriented Programming Systems Languages and Applications, ACM. https://doi.org/1546
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2009 | Conference Paper | IST-REx-ID: 4377
Hoenicke, J., Leino, K. R., Podelski, A., Schäf, M., & Wies, T. (2009). It’s Doomed; We Can Prove It (pp. 338–353). Presented at the FM: Formal Methods, Springer. https://doi.org/1557
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2009 | Conference Paper | IST-REx-ID: 4383 | OA
Guerraoui, R., Henzinger, T. A., & Singh, V. (2009). Software transactional memory on relaxed memory models (Vol. 5643, pp. 321–336). Presented at the CAV: Computer Aided Verification, Springer. https://doi.org/10.1007/978-3-642-02658-4_26
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2009 | Conference Paper | IST-REx-ID: 4385
Dragojevic, A., Guerraoui, R., Singh, A., & Singh, V. (2009). Preventing versus curing: avoiding conflicts in transactional memories (pp. 7–16). Presented at the POPL: Principles of Programming Languages, ACM. https://doi.org/1533
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2009 | Conference Paper | IST-REx-ID: 4391
Cerny, P., & Alur, R. (2009). Automated Analysis of Java Methods for Confidentiality (pp. 173–187). Presented at the CAV: Computer Aided Verification, Springer. https://doi.org/1548
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2009 | Conference Paper | IST-REx-ID: 4403 | OA
Alur, R., Cerny, P., & Weinstein, S. (2009). Algorithmic analysis of array-accessing programs (Vol. 5771, pp. 86–101). Presented at the CSL: Computer Science Logic, Coimbra, Portugal: Springer. https://doi.org/10.1007/978-3-642-04027-6_9
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2009 | Conference Paper | IST-REx-ID: 4453 | OA
Henzinger, T. A., Mateescu, M., & Wolf, V. (2009). Sliding-window abstraction for infinite Markov chains (Vol. 5643, pp. 337–352). Presented at the CAV: Computer Aided Verification, Springer. https://doi.org/10.1007/978-3-642-02658-4_27
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2009 | Conference Paper | IST-REx-ID: 4535
Didier, F., Henzinger, T. A., Mateescu, M., & Wolf, V. (2009). Approximation of event probabilities in noisy cellular processes (Vol. 5688, pp. 173–188). Presented at the CMSB: Computational Methods in Systems Biology, Springer. https://doi.org/10.1007/978-3-642-03845-7_12
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2009 | Conference Paper | IST-REx-ID: 4540
Chatterjee, K., Doyen, L., & Henzinger, T. A. (2009). Expressiveness and closure properties for quantitative languages (pp. 199–208). Presented at the LICS: Logic in Computer Science, IEEE. https://doi.org/10.1109/LICS.2009.16
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2009 | Conference Paper | IST-REx-ID: 4542 | OA
Chatterjee, K., Doyen, L., & Henzinger, T. A. (2009). Alternating weighted automata (Vol. 5699, pp. 3–13). Presented at the FCT: Fundamentals of Computation Theory, Wroclaw, Poland: Springer. https://doi.org/10.1007/978-3-642-03409-1_2
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2009 | Conference Paper | IST-REx-ID: 4543
Chatterjee, K., Henzinger, T. A., & Horn, F. (2009). Stochastic games with finitary objectives (Vol. 5734, pp. 34–54). Presented at the MFCS: Mathematical Foundations of Computer Science, High Tatras, Slovakia: Springer. https://doi.org/10.1007/978-3-642-03816-7_4
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2009 | Conference Paper | IST-REx-ID: 4544 | OA
Chatterjee, K., De Alfaro, L., & Henzinger, T. A. (2009). Termination criteria for solving concurrent safety and reachability games (pp. 197–206). Presented at the SODA: Symposium on Discrete Algorithms, SIAM. https://doi.org/10.1137/1.9781611973068.23
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2009 | Conference Paper | IST-REx-ID: 4545 | OA
Chatterjee, K., Doyen, L., & Henzinger, T. A. (2009). A survey of stochastic games with limsup and liminf objectives (Vol. 5556, pp. 1–15). Presented at the ICALP: Automata, Languages and Programming, Rhodos, Greece: Springer. https://doi.org/10.1007/978-3-642-02930-1_1
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2009 | Conference Paper | IST-REx-ID: 4569 | OA
Bloem, R., Chatterjee, K., Henzinger, T. A., & Jobstmann, B. (2009). Better quality in synthesis through quantitative objectives (Vol. 5643, pp. 140–156). Presented at the CAV: Computer Aided Verification, Grenoble, France: Springer. https://doi.org/10.1007/978-3-642-02658-4_14
View | DOI | Download Preprint (ext.) | arXiv
 

2009 | Conference Paper | IST-REx-ID: 4580 | OA
Berwanger, D., Chatterjee, K., De Wulf, M., Doyen, L., & Henzinger, T. A. (2009). Alpaga: A tool for solving parity games with imperfect information (Vol. 5505, pp. 58–61). Presented at the TACAS: Tools and Algorithms for the Construction and Analysis of Systems, Springer. https://doi.org/10.1007/978-3-642-00768-2_7
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2009 | Journal Article | IST-REx-ID: 3046
Grunewald, W., Cannoot, B., Friml, J., & Gheysen, G. (2009). Parasitic nematodes modulate PIN mediated auxin transport to facilitate infection. PLoS Pathogens. Public Library of Science. https://doi.org/ 10.1371/journal.ppat.1000266
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2009 | Journal Article | IST-REx-ID: 3047
Titapiwatanakun, B., Blakeslee, J., Bandyopadhyay, A., Yang, H., Mravec, J., Sauer, M., … Murphy, A. (2009). ABCB19 PGP19 stabilises PIN1 in membrane microdomains in Arabidopsis. Plant Journal. Wiley-Blackwell. https://doi.org/10.1111/j.1365-313X.2008.03668.x
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2009 | Journal Article | IST-REx-ID: 3048
Tanaka, H., Kitakura, S., De Rycke, R., De Groodt, R., & Friml, J. (2009). Fluorescence imaging based screen identifies ARF GEF component of early endosomal trafficking. Current Biology. Cell Press. https://doi.org/10.1016/j.cub.2009.01.057
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2009 | Journal Article | IST-REx-ID: 3049
Pernisová, M., Klíma, P., Horák, J., Válková, M., Malbeck, J., Souček, P., … Hejátko, J. (2009). Cytokinins modulate auxin induced organogenesis in plants via regulation of the auxin efflux. PNAS. National Academy of Sciences. https://doi.org/10.1073/pnas.0811539106
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2009 | Journal Article | IST-REx-ID: 3050
Růžička, K., Šimášková, M., Duclercq, J., Petrášek, J., Zažímalová, E., Simon, S., … Benková, E. (2009). Cytokinin regulates root meristem activity via modulation of the polar auxin transport. PNAS. National Academy of Sciences. https://doi.org/10.1073/pnas.0900060106
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2009 | Journal Article | IST-REx-ID: 3051 | OA
Weijers, D., & Friml, J. (2009). SnapShot: Auxin signaling and transport. Cell. Cell Press. https://doi.org/10.1016/j.cell.2009.03.009
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2009 | Journal Article | IST-REx-ID: 3052 | OA
Vanneste, S., & Friml, J. (2009). Auxin: A trigger for change in plant development. Cell. Cell Press. https://doi.org/10.1016/j.cell.2009.03.001
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