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5893 Publications


2004 | Journal Article | IST-REx-ID: 3987
V. Natarajan and H. Edelsbrunner, “Simplification of three-dimensional density maps,” IEEE Transactions on Visualization and Computer Graphics, vol. 10, no. 5, pp. 587–597, 2004.
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2004 | Conference Paper | IST-REx-ID: 3988
V. Choi, P. Agarwal, H. Edelsbrunner, and J. Rudolph, “Local search heuristic for rigid protein docking,” presented at the WABI: 4th International Workshop on Algorithms in Bioinformatics, 2004, vol. 3240, pp. 218–229.
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2004 | Conference Paper | IST-REx-ID: 3989
H. Edelsbrunner, J. Harer, V. Natarajan, and V. Pascucci, “Local and global comparison of continuous functions,” presented at the VIS: IEEE Visualization, 2004, pp. 275–280.
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2004 | Journal Article | IST-REx-ID: 3990
P. Agarwal, H. Edelsbrunner, and Y. Wang, “Computing the writhing number of a polygonal knot,” Discrete & Computational Geometry, vol. 32, no. 1, pp. 37–53, 2004.
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2004 | Journal Article | IST-REx-ID: 4172
J. Montero and C. Heisenberg, “Gastrulation dynamics: cells move into focus,” Trends in Cell Biology, vol. 14, no. 11, pp. 620–627, 2004.
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2004 | Journal Article | IST-REx-ID: 4224
K. Kruse, P. Pantazis, T. Bollenbach, F. Julicher, and M. Gonzalez Gaitan, “Dpp gradient formation by dynamin-dependent endocytosis: receptor trafficking and the diffusion model,” Development, vol. 131, no. 19, pp. 4843–4856, 2004.
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2004 | Book Chapter | IST-REx-ID: 4230
H. Vladar, R. Cipriani, B. Scharifker, and J. Bubis, “A mechanism for the prebiotic emergence of proteins,” in Life in the Universe From the Miller Experiment to the Search for Life on Other Worlds, A. Hanslmeier, S. Kempe, and J. Seckbach, Eds. Springer, 2004, pp. 83–87.
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2004 | Thesis | IST-REx-ID: 4236
H. De Vladar, Métodos no lineales y sus aplicaciones en dinámicas aleatorias de poblaciones celulares. Centro de estudios avazados, IVIC, 2004.
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2004 | Journal Article | IST-REx-ID: 4238
H. De Vladar and J. González, “Dynamic response of cancer under the influence of immunological activity and therapy,” Journal of Theoretical Biology, vol. 227, no. 3, pp. 335–348, 2004.
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2004 | Book Chapter | IST-REx-ID: 4239
H. Vladar, R. Cipriani, B. Scharifker, and J. Bubis, “A Mechanism for the Prebiotic Emergence of Proteins,” in Life in the Universe From the Miller Experiment to the Search for Life on Other Worlds, vol. 7, J. Seckbach, J. Chela Flores, T. Owen, and F. Raulin, Eds. Springer, 2004, pp. 83–87.
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2004 | Journal Article | IST-REx-ID: 4253
N. H. Barton, A. Etheridge, and A. Sturm, “Coalescence in a Random Background,” Annals of Applied Probability, vol. 14, no. 2, pp. 754–785, 2004.
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2004 | Conference Paper | IST-REx-ID: 4372
O. Maler and D. Nickovic, “Monitoring Temporal Properties of Continuous Signals,” presented at the FORMATS: Formal Modeling and Analysis of Timed Systems, 2004, pp. 152–166.
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2004 | Thesis | IST-REx-ID: 4424
R. Jhala, Program verification by lazy abstraction. University of California, Berkeley, 2004, pp. 1–165.
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2004 | Conference Paper | IST-REx-ID: 4445
T. A. Henzinger and C. Kirsch, “A typed assembly language for real-time programs,” presented at the EMSOFT: Embedded Software , 2004, pp. 104–113.
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2004 | Conference Paper | IST-REx-ID: 4458
T. A. Henzinger, R. Jhala, R. Majumdar, and K. Mcmillan, “Abstractions from proofs,” presented at the POPL: Principles of Programming Languages, 2004, pp. 232–244.
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2004 | Conference Paper | IST-REx-ID: 4459
T. A. Henzinger, R. Jhala, and R. Majumdar, “Race checking by context inference,” presented at the PLDI: Programming Languages Design and Implementation, 2004, pp. 1–13.
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2004 | Book Chapter | IST-REx-ID: 4461
T. A. Henzinger, R. Jhala, R. Majumdar, and M. Sanvido, “Extreme model checking,” in Verification: Theory and Practice, vol. 2772, Springer, 2004, pp. 332–358.
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2004 | Conference Paper | IST-REx-ID: 4525
A. Ghosal, T. A. Henzinger, C. Kirsch, and M. Sanvido, “Event-driven programming with logical execution times,” presented at the HSCC: Hybrid Systems - Computation and Control, 2004, vol. 2993, pp. 167–170.
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2004 | Conference Paper | IST-REx-ID: 4555
K. Chatterjee, L. De Alfaro, and T. A. Henzinger, “Trading memory for randomness,” presented at the QEST: Quantitative Evaluation of Systems, 2004, pp. 206–217.
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2004 | Journal Article | IST-REx-ID: 4556
K. Chatterjee, D. Ma, R. Majumdar, T. Zhao, T. A. Henzinger, and J. Palsberg, “Stack size analysis for interrupt-driven programs,” Information and Computation, vol. 194, no. 2, pp. 144–174, 2004.
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2004 | Conference Paper | IST-REx-ID: 4558
K. Chatterjee, M. Jurdziński, and T. A. Henzinger, “Quantitative stochastic parity games,” presented at the SODA: Symposium on Discrete Algorithms, 2004, pp. 121–130.
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2004 | Conference Paper | IST-REx-ID: 4577
D. Beyer, T. A. Henzinger, R. Jhala, and R. Majumdar, “An eclipse plug-in for model checking,” presented at the IWPC: Program Comprehension, 2004, pp. 251–255.
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2004 | Conference Paper | IST-REx-ID: 4578
D. Beyer, A. Chlipala, T. A. Henzinger, R. Jhala, and R. Majumdar, “The BLAST query language for software verification,” presented at the SAS: Static Analysis Symposium, 2004, vol. 3148, pp. 2–18.
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2004 | Conference Paper | IST-REx-ID: 4581
D. Beyer, A. Chlipala, T. A. Henzinger, R. Jhala, and R. Majumdar, “Generating tests from counterexamples,” presented at the ICSE: Software Engineering, 2004, pp. 326–335.
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2004 | Conference Paper | IST-REx-ID: 4629
L. De Alfaro, M. Faella, T. A. Henzinger, R. Majumdar, and M. Stoelinga, “Model checking discounted temporal properties,” presented at the TACAS: Tools and Algorithms for the Construction and Analysis of Systems, 2004, vol. 2988, pp. 77–92.
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2004 | Journal Article | IST-REx-ID: 6155
B. H. . Cheung, F. Arellano-Carbajal, I. Rybicki, and M. de Bono, “Soluble guanylate cyclases act in neurons exposed to the body fluid to promote C. elegans aggregation behavior,” Current Biology, vol. 14, no. 12, pp. 1105–1111, 2004.
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2004 | Book Review | IST-REx-ID: 2636
A. Momiyama and R. Shigemoto, “Function and distribution of glutamate receptors in the central synapses,” Tanpakushitsu kakusan koso Protein nucleic acid enzyme, vol. 49, no. 3 Suppl. Kyoritsu Shuppan, pp. 287–294, 2004.
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2004 | Journal Article | IST-REx-ID: 2638
Á. Kulik et al., “Immunocytochemical localization of the α1A subunit of the P/Q-type calcium channel in the rat cerebellum,” European Journal of Neuroscience, vol. 19, no. 8, pp. 2169–2178, 2004.
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2004 | Journal Article | IST-REx-ID: 2639
J. Somogyi et al., “GABAergic basket cells expressing cholecystokinin contain vesicular glutamate transporter type 3 (VGLUT3) in their synaptic terminals in hippocampus and isocortex of the rat,” European Journal of Neuroscience, vol. 19, no. 3, pp. 552–569, 2004.
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2004 | Journal Article | IST-REx-ID: 2640
T. Notomi and R. Shigemoto, “Immunohistochemical localization of Ih channel subunits, HCN1-4, in the rat brain,” Journal of Comparative Neurology, vol. 471, no. 3, pp. 241–276, 2004.
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2004 | Journal Article | IST-REx-ID: 2641
Y. Kang, T. Notomi, M. Saito, W. Zhang, and R. Shigemoto, “Bidirectional interactions between H-channels and Na+-K + pumps in mesencephalic trigeminal neurons,” Journal of Neuroscience, vol. 24, no. 14, pp. 3694–3702, 2004.
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2004 | Journal Article | IST-REx-ID: 2642
F. Ferraguti et al., “Immunolocalization of metabotropic glutamate receptor 1α (mGluR1α) in distinct classes of interneuron in the CA1 region of the rat hippocampus,” Hippocampus, vol. 14, no. 2, pp. 193–215, 2004.
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2004 | Journal Article | IST-REx-ID: 2643
R. Luján, R. Shigemoto, Á. Kulik, and J. Juíz, “Localization of the GABAB receptor 1a/b subunit relative to glutamatergic synapses in the dorsal cochlear nucleus of the rat,” Journal of Comparative Neurology, vol. 475, no. 1, pp. 36–46, 2004.
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2004 | Journal Article | IST-REx-ID: 2644
N. Kogo, Y. Dalezios, M. Capogna, F. Ferraguti, R. Shigemoto, and P. Somogyi, “Depression of GABAergic input to identified hippocampal neurons by group III metabotropic glutamate receptors in the rat,” European Journal of Neuroscience, vol. 19, no. 10, pp. 2727–2740, 2004.
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2004 | Journal Article | IST-REx-ID: 2645
S. Chan, R. Shigemoto, J. Mercer, and J. Surmeier, “HCN2 and HCN1 channels govern the regularity of autonomous pacemaking and synaptic resetting in globus pallidus neurons,” Journal of Neuroscience, vol. 24, no. 44, pp. 9921–9932, 2004.
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2004 | Journal Article | IST-REx-ID: 2646
G. López Bendito, R. Shigemoto, Á. Kulik, I. Vida, A. Fairén, and R. Luján, “ Distribution of metabotropic GABA receptor subunits GABAB1a/b and GABAB2 in the rat hippocampus during prenatal and postnatal development,” Hippocampus, vol. 14, no. 7, pp. 836–848, 2004.
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2004 | Journal Article | IST-REx-ID: 2706
L. Erdös and J. Solovej, “Magnetic Lieb-Thirring inequalities with optimal dependence on the field strength,” Journal of Statistical Physics, vol. 116, no. 1–4, pp. 475–506, 2004.
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2004 | Journal Article | IST-REx-ID: 2707
L. Erdös, M. Salmhofer, and H. Yau, “On the quantum Boltzmann equation,” Journal of Statistical Physics, vol. 116, no. 1–4, pp. 367–380, 2004.
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2004 | Journal Article | IST-REx-ID: 2741
L. Erdös and J. Solovej, “Uniform Lieb-Thirring inequality for the three-dimensional Pauli operator with a strong non-homogeneous magnetic field,” Annales Henri Poincare, vol. 5, no. 4, pp. 671–741, 2004.
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2004 | Journal Article | IST-REx-ID: 2742
A. Elgart, L. Erdös, B. Schlein, and H. Yau, “Nonlinear Hartree equation as the mean field limit of weakly coupled fermions,” Journal de Mathématiques Pures et Appliquées, vol. 83, no. 10, pp. 1241–1273, 2004.
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2004 | Journal Article | IST-REx-ID: 2786
B. Hof et al., “Experimental observation of nonlinear traveling waves in turbulent pipe flow,” Science, vol. 305, no. 5690, pp. 1594–1598, 2004.
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2004 | Journal Article | IST-REx-ID: 2787
B. Hof, A. Juel, L. Zhao, D. Henry, H. Ben Hadid, and T. Mullin, “On the onset of oscillatory convection in molten gallium,” Journal of Fluid Mechanics, vol. 515, pp. 391–413, 2004.
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2004 | Journal Article | IST-REx-ID: 2997
J. Friml et al., “A PINOID-dependent binary switch in apical-basal PIN polar targeting directs auxin efflux,” Science, vol. 306, no. 5697, pp. 862–865, 2004.
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2004 | Journal Article | IST-REx-ID: 2998
M. Duroux, A. Houben, K. Růžička, J. Friml, and K. Grasser, “The chromatin remodelling complex FACT associates with actively transcribed regions of the Arabidopsis genome,” Plant Journal, vol. 40, no. 5, pp. 660–671, 2004.
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2004 | Journal Article | IST-REx-ID: 2999
M. Sauer and J. Friml, “In vitro culture of Arabidopsis embryos within their ovules,” Plant Journal, vol. 40, no. 5, pp. 835–843, 2004.
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2004 | Book Review | IST-REx-ID: 3142
S. Hippenmeyer, I. Kramer, and S. Arber, “Control of neuronal phenotype: What targets tell the cell bodies,” Trends in Neurosciences, vol. 27, no. 8. Elsevier, pp. 482–488, 2004.
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2004 | Journal Article | IST-REx-ID: 1963
A. Mamedova, P. Holt, J. Carroll, and L. A. Sazanov, “Substrate-induced conformational change in bacterial complex I,” Journal of Biological Chemistry, vol. 279, no. 22, pp. 23830–23836, 2004.
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2004 | Journal Article | IST-REx-ID: 864
A. Panchenko, F. Kondrashov, and S. Bryant, “Prediction of functional sites by analysis of sequence and structure conservation,” Protein Science, vol. 13, no. 4, pp. 884–892, 2004.
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2004 | Journal Article | IST-REx-ID: 870
F. Kondrashov, A. Ogurtsov, and A. Kondrashov, “Bioinformatical assay of human gene morbidity,” Nucleic Acids Research, vol. 32, no. 5, pp. 1731–1737, 2004.
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2004 | Journal Article | IST-REx-ID: 875
F. Kondrashov and E. Koonin, “A common framework for understanding the origin of genetic dominance and evolutionary fates of gene duplications,” Trends in Genetics, vol. 20, no. 7, pp. 287–291, 2004.
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