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6118 Publications
2006 | Book Chapter | IST-REx-ID: 3404
Atomic force microscopy
H.L. Janovjak, R. Sawhney, M. Stark, D. Mueller, in:, Techniques in Microscopy for Biomedical Applications, World Scientific Publishing, 2006, pp. 213–284.
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H.L. Janovjak, R. Sawhney, M. Stark, D. Mueller, in:, Techniques in Microscopy for Biomedical Applications, World Scientific Publishing, 2006, pp. 213–284.
2006 | Journal Article | IST-REx-ID: 3413
Bacteriorhodopsin folds into the membrane against an external force
M. Kessler, K. Gottschalk, H.L. Janovjak, D. Mueller, H. Gaub, Journal of Molecular Biology 357 (2006) 644–654.
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| DOI
M. Kessler, K. Gottschalk, H.L. Janovjak, D. Mueller, H. Gaub, Journal of Molecular Biology 357 (2006) 644–654.
2006 | Journal Article | IST-REx-ID: 3414
Observing folding pathways and kinetics of a single sodium-proton antiporter from Escherichia coli
A. Kedrov, H.L. Janovjak, C. Ziegler, W. Kühlbrandt, D. Mueller, Journal of Molecular Biology 355 (2006) 2–8.
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| DOI
A. Kedrov, H.L. Janovjak, C. Ziegler, W. Kühlbrandt, D. Mueller, Journal of Molecular Biology 355 (2006) 2–8.
2006 | Book Review | IST-REx-ID: 3415
Imaging and detecting molecular interactions of single membrane proteins
H.L. Janovjak, A. Kedrov, D. Cisneros, T. Sapra, J. Struckmeier, D. Mueller, Neurobiology of Aging 27 (2006) 546–561.
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| DOI
H.L. Janovjak, A. Kedrov, D. Cisneros, T. Sapra, J. Struckmeier, D. Mueller, Neurobiology of Aging 27 (2006) 546–561.
2006 | Preprint | IST-REx-ID: 3431 |

Ising models for networks of real neurons
G. Tkačik, E. Schneidman, M. Berry, W. Bialek, ArXiv (2006) 1–4.
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G. Tkačik, E. Schneidman, M. Berry, W. Bialek, ArXiv (2006) 1–4.
2006 | Journal Article | IST-REx-ID: 3437
Fitness effects of beneficial mutations: the mutational landscape model in experimental evolution
A. Betancourt, J.P. Bollback, Current Opinion in Genetics & Development 16 (2006) 618–623.
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A. Betancourt, J.P. Bollback, Current Opinion in Genetics & Development 16 (2006) 618–623.
2006 | Conference Paper | IST-REx-ID: 3449
Games for controls
K. Chatterjee, R. Jagadeesan, C. Pitcher, in:, IEEE, 2006, pp. 70–82.
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| DOI
K. Chatterjee, R. Jagadeesan, C. Pitcher, in:, IEEE, 2006, pp. 70–82.
2006 | Book Review | IST-REx-ID: 3463
Timing and efficacy of transmitter release at mossy fiber synapses in the hippocampal network. (Review)
J. Bischofberger, D. Engel, M. Frotscher, P.M. Jonas, Pflugers Archiv : European Journal of Physiology 453 (2006) 361–372.
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| DOI
J. Bischofberger, D. Engel, M. Frotscher, P.M. Jonas, Pflugers Archiv : European Journal of Physiology 453 (2006) 361–372.
2006 | Patent | IST-REx-ID: 3510
Method, apparatus and computer program products for automatically generating NURBS models of triangulated surfaces using homeomorphism
H. Edelsbrunner, P. Fu, D. Nekhayev, M. Facello, S. Williams, (2006).
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H. Edelsbrunner, P. Fu, D. Nekhayev, M. Facello, S. Williams, (2006).
2006 | Patent | IST-REx-ID: 3511
Manufacturing methods and systems for rapid production of hearing-aid shells
P. Fu, D. Nekhayev, H. Edelsbrunner, (2006).
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P. Fu, D. Nekhayev, H. Edelsbrunner, (2006).
2006 | Patent | IST-REx-ID: 3512
Method, apparatus and computer products that reconstruct surfaces from data points
Y. Fletcher, T. Gloth, H. Edelsbrunner, P. Fu, (2006).
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Y. Fletcher, T. Gloth, H. Edelsbrunner, P. Fu, (2006).
2006 | Journal Article | IST-REx-ID: 3522
Place-selective firing of CA1 pyramidal cells during sharp wave/ripple network patterns in exploratory behavior
J. O’Neill, T. Senior, J.L. Csicsvari, Neuron 49 (2006) 143–155.
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| DOI
J. O’Neill, T. Senior, J.L. Csicsvari, Neuron 49 (2006) 143–155.
2006 | Journal Article | IST-REx-ID: 3545
Changes in functional connectivity within the rat striatopallidal axis during global brain activation in vivo
P. Magill, A. Pogosyan, A. Sharott, J.L. Csicsvari, J. Bolam, P. Brown, Journal of Neuroscience 26 (2006) 6318–6329.
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P. Magill, A. Pogosyan, A. Sharott, J.L. Csicsvari, J. Bolam, P. Brown, Journal of Neuroscience 26 (2006) 6318–6329.
2006 | Conference Paper | IST-REx-ID: 3559
Vines and vineyards by updating persistence in linear time
D. Cohen Steiner, H. Edelsbrunner, D. Morozov, in:, ACM, 2006, pp. 119–126.
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D. Cohen Steiner, H. Edelsbrunner, D. Morozov, in:, ACM, 2006, pp. 119–126.
2006 | Conference Paper | IST-REx-ID: 3560
Persistence-sensitive simplification of functions on 2-manifolds
H. Edelsbrunner, D. Morozov, V. Pascucci, in:, ACM, 2006, pp. 127–134.
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H. Edelsbrunner, D. Morozov, V. Pascucci, in:, ACM, 2006, pp. 127–134.
2006 | Book Review | IST-REx-ID: 3594
Hybridisation between red and sika deer in Scotland
J. Pemberton, G. Swanson, N.H. Barton, S. Livingstone, H. Senn, Deer 13 (2006) 22–26.
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J. Pemberton, G. Swanson, N.H. Barton, S. Livingstone, H. Senn, Deer 13 (2006) 22–26.
2006 | Conference Paper | IST-REx-ID: 3499
Nash equilibrium for upward-closed objectives
K. Chatterjee, in:, Springer, 2006, pp. 271–286.
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K. Chatterjee, in:, Springer, 2006, pp. 271–286.
2006 | Conference Paper | IST-REx-ID: 3500
Algorithms for Büchi Games
K. Chatterjee, T.A. Henzinger, N. Piterman, in:, ACM, 2006.
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K. Chatterjee, T.A. Henzinger, N. Piterman, in:, ACM, 2006.
2006 | Conference Paper | IST-REx-ID: 4549
Compositional quantitative reasoning
K. Chatterjee, L. De Alfaro, M. Faella, T.A. Henzinger, R. Majumdar, M. Stoelinga, in:, IEEE, 2006, pp. 179–188.
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K. Chatterjee, L. De Alfaro, M. Faella, T.A. Henzinger, R. Majumdar, M. Stoelinga, in:, IEEE, 2006, pp. 179–188.
2006 | Journal Article | IST-REx-ID: 4550
Games with secure equilibria
K. Chatterjee, T.A. Henzinger, M. Jurdziński, Theoretical Computer Science 365 (2006) 67–82.
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K. Chatterjee, T.A. Henzinger, M. Jurdziński, Theoretical Computer Science 365 (2006) 67–82.
2006 | Conference Paper | IST-REx-ID: 4551
Markov decision processes with multiple objectives
K. Chatterjee, R. Majumdar, T.A. Henzinger, in:, Springer, 2006, pp. 325–336.
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| DOI
K. Chatterjee, R. Majumdar, T.A. Henzinger, in:, Springer, 2006, pp. 325–336.
2006 | Conference Paper | IST-REx-ID: 4552
Strategy improvement for concurrent reachability games
K. Chatterjee, L. De Alfaro, T.A. Henzinger, in:, IEEE, 2006, pp. 291–300.
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| DOI
K. Chatterjee, L. De Alfaro, T.A. Henzinger, in:, IEEE, 2006, pp. 291–300.
2006 | Conference Paper | IST-REx-ID: 4574
Lazy shape analysis
D. Beyer, T.A. Henzinger, G. Théoduloz, in:, Springer, 2006, pp. 532–546.
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| DOI
D. Beyer, T.A. Henzinger, G. Théoduloz, in:, Springer, 2006, pp. 532–546.
2006 | Book Chapter | IST-REx-ID: 3722
Rastersondenmikroskopie
H.L. Janovjak, D. Mueller, in:, Bioanalytik, Spektrum Akademischer Verlag, 2006.
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H.L. Janovjak, D. Mueller, in:, Bioanalytik, Spektrum Akademischer Verlag, 2006.
2006 | Journal Article | IST-REx-ID: 3728
Pulling single bacteriorhodopsin out of a membrane: Comparison of simulation and experiment
M. Cieplak, S. Filipek, H.L. Janovjak, K. Krzysko, Biochimica et Biophysica Acta (BBA) - Biomembranes 1758 (2006) 537–544.
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| DOI
M. Cieplak, S. Filipek, H.L. Janovjak, K. Krzysko, Biochimica et Biophysica Acta (BBA) - Biomembranes 1758 (2006) 537–544.
2006 | Journal Article | IST-REx-ID: 3729
Direct measurement of single-molecule visco-elasticity in atomic force microscope force-extension experiments
C. Bippes, A. Humphris, M. Stark, D. Mueller, H.L. Janovjak, European Biophysics Journal 35 (2006) 287–292.
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C. Bippes, A. Humphris, M. Stark, D. Mueller, H.L. Janovjak, European Biophysics Journal 35 (2006) 287–292.
2006 | Journal Article | IST-REx-ID: 3750
Protein expression enhancement in efflux-deleted mutant bacteria
T. Le, C.C. Guet, P. Cluzel, Protein Expression and Purification 48 (2006) 28–31.
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T. Le, C.C. Guet, P. Cluzel, Protein Expression and Purification 48 (2006) 28–31.
2006 | Journal Article | IST-REx-ID: 3755 |

Dynamical determinants of drug-inducible gene expression in a single bacterium
T. Le, T. Emonet, S. Harlepp, C.C. Guet, P. Cluzel, Biophysical Journal 90 (2006) 3315–3321.
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T. Le, T. Emonet, S. Harlepp, C.C. Guet, P. Cluzel, Biophysical Journal 90 (2006) 3315–3321.
2006 | Conference Paper | IST-REx-ID: 3758
Keyframe control of complex particle systems using the adjoint method
C.J. Wojtan, P. Mucha, G. Turk, in:, ACM, 2006, pp. 15–23.
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C.J. Wojtan, P. Mucha, G. Turk, in:, ACM, 2006, pp. 15–23.
2006 | Journal Article | IST-REx-ID: 3767
Determinants of simulated RNA evolution.
A. Kupczok, P. Dittrich, Journal of Theoretical Biology 238 (2006) 726–35.
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A. Kupczok, P. Dittrich, Journal of Theoretical Biology 238 (2006) 726–35.
2006 | Journal Article | IST-REx-ID: 3607
Will population bottlenecks and multilocus epistasis increase additive genetic variance?
M. Turelli, N.H. Barton, Evolution; International Journal of Organic Evolution 60 (2006) 1763–1776.
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M. Turelli, N.H. Barton, Evolution; International Journal of Organic Evolution 60 (2006) 1763–1776.
2006 | Journal Article | IST-REx-ID: 3608
Chromosome inversions, local adaptation, and speciation
M. Kirkpatrick, N.H. Barton, Genetics 173 (2006) 419–434.
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| DOI
M. Kirkpatrick, N.H. Barton, Genetics 173 (2006) 419–434.
2006 | Journal Article | IST-REx-ID: 3609
Hybridization of Bombina bombina and B. variegata (Anura, Discoglossidae) at a sharp ecotone in western Ukraine: comparisons across transects and over time
A. Yanchukov, S. Hofman, J. Szymura, S. Mezhzherin, S. Morozov Leonov, N.H. Barton, B. Nürnberger, Evolution; International Journal of Organic Evolution 60 (2006) 583–600.
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A. Yanchukov, S. Hofman, J. Szymura, S. Mezhzherin, S. Morozov Leonov, N.H. Barton, B. Nürnberger, Evolution; International Journal of Organic Evolution 60 (2006) 583–600.
2006 | Journal Article | IST-REx-ID: 3610
Prediction of effects of genetic drift on variance components under a general model of epistasis
W. Hill, N.H. Barton, M. Turelli, Theoretical Population Biology 70 (2006) 56–62.
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W. Hill, N.H. Barton, M. Turelli, Theoretical Population Biology 70 (2006) 56–62.
2006 | Conference Paper | IST-REx-ID: 3677
Spatiogram-based shot distances for video retrieval
A. Ulges, C. Lampert, D. Keysers, in:, NIST (National Institute of Standards and Technology, US Department of Commerce), 2006, pp. 1–10.
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A. Ulges, C. Lampert, D. Keysers, in:, NIST (National Institute of Standards and Technology, US Department of Commerce), 2006, pp. 1–10.
2006 | Conference Paper | IST-REx-ID: 3679
Satellite tracks removal in astronomical images
H. Ali, C. Lampert, T. Breuel, in:, Springer, 2006, pp. 892–901.
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H. Ali, C. Lampert, T. Breuel, in:, Springer, 2006, pp. 892–901.
2006 | Conference Paper | IST-REx-ID: 3680
Printing technique classification for document counterfeit detection
C. Lampert, L. Mei, T. Breuel, in:, IEEE, 2006, pp. 639–634.
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C. Lampert, L. Mei, T. Breuel, in:, IEEE, 2006, pp. 639–634.
2006 | Conference Paper | IST-REx-ID: 3683
Objective quality measurement for geometric document image restoration
C. Lampert, T. Breuel, in:, Springer, 2006.
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C. Lampert, T. Breuel, in:, Springer, 2006.
2006 | Journal Article | IST-REx-ID: 3811
Shunting inhibition improves robustness of gamma oscillations in hippocampal interneuron networks by homogenizing firing rates
I. Vida, M. Bartos, P.M. Jonas, Neuron 49 (2006) 107–17.
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| DOI
I. Vida, M. Bartos, P.M. Jonas, Neuron 49 (2006) 107–17.
2006 | Journal Article | IST-REx-ID: 3813 |

Hyperpolarization-activated cation channels in fast-spiking interneurons of rat hippocampus
Y. Aponte, C. Lien, E. Reisinger, P.M. Jonas, Journal of Physiology 574 (2006) 229–43.
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Y. Aponte, C. Lien, E. Reisinger, P.M. Jonas, Journal of Physiology 574 (2006) 229–43.
2006 | Book Review | IST-REx-ID: 3814
Synapses formed by normal and abnormal hippocampal mossy fibers (Review)
M. Frotscher, P.M. Jonas, R. Sloviter, Cell and Tissue Research 326 (2006) 361–7.
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| DOI
M. Frotscher, P.M. Jonas, R. Sloviter, Cell and Tissue Research 326 (2006) 361–7.
2006 | Journal Article | IST-REx-ID: 3815
Timing and efficacy of transmitter release at mossy fiber synapses in the hippocampal network
J. Bischofberger, D. Engel, M. Frotscher, P.M. Jonas, Pflugers Archiv : European Journal of Physiology 453 (2006) 361–72.
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| DOI
J. Bischofberger, D. Engel, M. Frotscher, P.M. Jonas, Pflugers Archiv : European Journal of Physiology 453 (2006) 361–72.
2006 | Journal Article | IST-REx-ID: 3817
The most important recent advances in synapse research from my point of view--and what remains to be done
M. Frotscher, E. Gundelfinger, P.M. Jonas, E. Neher, P. Seeburg, Cell and Tissue Research 326 (2006) 203–4.
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| DOI
M. Frotscher, E. Gundelfinger, P.M. Jonas, E. Neher, P. Seeburg, Cell and Tissue Research 326 (2006) 203–4.
2006 | Journal Article | IST-REx-ID: 3818
Patch-clamp recording from mossy fiber terminals in hippocampal slices
J. Bischofberger, D. Engel, L. Li, J. Geiger, P.M. Jonas, Nature Protocols 1 (2006) 2075–81.
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| DOI
J. Bischofberger, D. Engel, L. Li, J. Geiger, P.M. Jonas, Nature Protocols 1 (2006) 2075–81.
2006 | Conference Paper | IST-REx-ID: 3692
Color image dequantization by constrained diffusion
D. Keysers, C. Lampert, T. Breuel, in:, SPIE, 2006.
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| DOI
D. Keysers, C. Lampert, T. Breuel, in:, SPIE, 2006.
2006 | Conference Paper | IST-REx-ID: 3693
Anisotropic Gaussian filtering using fixed point arithmetic
C. Lampert, O. Wirjadi, in:, IEEE, 2006, pp. 1565–1568.
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| DOI
C. Lampert, O. Wirjadi, in:, IEEE, 2006, pp. 1565–1568.
2006 | Journal Article | IST-REx-ID: 3695 |

An optimal non-orthogonal separation of the anisotropic Gaussian convolution filter
C. Lampert, O. Wirjadi, IEEE Transactions on Image Processing (TIP) 15 (2006) 3501–3513.
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C. Lampert, O. Wirjadi, IEEE Transactions on Image Processing (TIP) 15 (2006) 3501–3513.
2006 | Conference Paper | IST-REx-ID: 3685
Machine learning for video compression: Macroblock mode decision
C. Lampert, in:, IEEE, 2006, pp. 936–940.
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C. Lampert, in:, IEEE, 2006, pp. 936–940.
2006 | Conference Paper | IST-REx-ID: 3888
Strategy improvement for stochastic Rabin and Streett games
K. Chatterjee, T.A. Henzinger, in:, Schloss Dagstuhl - Leibniz-Zentrum für Informatik, 2006, pp. 375–389.
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| DOI
K. Chatterjee, T.A. Henzinger, in:, Schloss Dagstuhl - Leibniz-Zentrum für Informatik, 2006, pp. 375–389.
2006 | Conference Paper | IST-REx-ID: 3889
Algorithms for omega-regular games with imperfect information
K. Chatterjee, L. Doyen, T.A. Henzinger, J. Raskin, in:, Springer, 2006, pp. 287–302.
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| DOI
K. Chatterjee, L. Doyen, T.A. Henzinger, J. Raskin, in:, Springer, 2006, pp. 287–302.