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6107 Publications
2006 | Journal Article | IST-REx-ID: 3008
A molecular framework for plant regeneration
J. Xu, H. Hofhuis, R. Heidstra, M. Sauer, J. Friml, B. Scheres, Science 311 (2006) 385–388.
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| DOI
J. Xu, H. Hofhuis, R. Heidstra, M. Sauer, J. Friml, B. Scheres, Science 311 (2006) 385–388.
2006 | Journal Article | IST-REx-ID: 3009 | 
Auxin signaling
T. Paciorek, J. Friml, Journal of Cell Science 119 (2006) 1199–1202.
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T. Paciorek, J. Friml, Journal of Cell Science 119 (2006) 1199–1202.
2006 | Journal Article | IST-REx-ID: 3010
Control of leaf vascular patterning by polar auxin transport
E. Scarpella, D. Marcos, J. Friml, T. Berleth, Genes and Development 20 (2006) 1015–1027.
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| DOI
E. Scarpella, D. Marcos, J. Friml, T. Berleth, Genes and Development 20 (2006) 1015–1027.
2006 | Journal Article | IST-REx-ID: 3011
Polar PIN localization directs auxin flow in plants
J. Wiśniewska, J. Xu, D. Seifertová, P. Brewer, K. Růžička, I. Blilou, D. Rouquié, E. Benková, B. Scheres, J. Friml, Science 312 (2006).
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| DOI
J. Wiśniewska, J. Xu, D. Seifertová, P. Brewer, K. Růžička, I. Blilou, D. Rouquié, E. Benková, B. Scheres, J. Friml, Science 312 (2006).
2006 | Journal Article | IST-REx-ID: 3012
PIN proteins perform a rate-limiting function in cellular auxin efflux
J. Petrášek, J. Mravec, R. Bouchard, J. Blakeslee, M.F. Abas, D. Seifertová, J. Wiśniewska, Z. Tadele, M. Kubeš, M. Čovanová, P. Dhonukshe, P. Skůpa, E. Benková, L. Perry, P. Křeček, O. Lee, G. Fink, M. Geisler, A. Murphy, C. Luschnig, E. Zažímalová, J. Friml, Science 312 (2006) 914–918.
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J. Petrášek, J. Mravec, R. Bouchard, J. Blakeslee, M.F. Abas, D. Seifertová, J. Wiśniewska, Z. Tadele, M. Kubeš, M. Čovanová, P. Dhonukshe, P. Skůpa, E. Benková, L. Perry, P. Křeček, O. Lee, G. Fink, M. Geisler, A. Murphy, C. Luschnig, E. Zažímalová, J. Friml, Science 312 (2006) 914–918.
2006 | Journal Article | IST-REx-ID: 3013
Immunocytochemical technique for protein localization in sections of plant tissues
T. Paciorek, M. Sauer, J. Balla, J. Wiśniewska, J. Friml, Nature Protocols 1 (2006) 104–107.
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| DOI
T. Paciorek, M. Sauer, J. Balla, J. Wiśniewska, J. Friml, Nature Protocols 1 (2006) 104–107.
2006 | Journal Article | IST-REx-ID: 3014
In situ hybridization for mRNA detection in Arabidopsis tissue sections
P. Brewer, M. Heisler, J. Hejátko, J. Friml, E. Benková, Nature Protocols 1 (2006) 1462–1467.
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| DOI
P. Brewer, M. Heisler, J. Hejátko, J. Friml, E. Benková, Nature Protocols 1 (2006) 1462–1467.
2006 | Journal Article | IST-REx-ID: 3015
Immunocytochemical techniques for whole mount in situ protein localization in plants
M. Sauer, T. Paciorek, E. Benková, J. Friml, Nature Protocols 1 (2006) 98–103.
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| DOI
M. Sauer, T. Paciorek, E. Benková, J. Friml, Nature Protocols 1 (2006) 98–103.
2006 | Journal Article | IST-REx-ID: 3016
Canalization of auxin flow by Aux/IAA-ARF-dependent feedback regulation of PIN polarity
M. Sauer, J. Balla, C. Luschnig, J. Wiśniewska, V. Reinöhl, J. Friml, E. Benková, Genes and Development 20 (2006) 2902–2911.
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M. Sauer, J. Balla, C. Luschnig, J. Wiśniewska, V. Reinöhl, J. Friml, E. Benková, Genes and Development 20 (2006) 2902–2911.
2006 | Journal Article | IST-REx-ID: 3017
Spatiotemporal asymmetric auxin distribution: A means to coordinate plant development
H. Tanaka, P. Dhonukshe, P. Brewer, J. Friml, Cellular and Molecular Life Sciences 63 (2006) 2738–2754.
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| DOI
H. Tanaka, P. Dhonukshe, P. Brewer, J. Friml, Cellular and Molecular Life Sciences 63 (2006) 2738–2754.
2006 | Journal Article | IST-REx-ID: 3018
Subcellular trafficking of the Arabidopsis auxin influx carrier AUX1 uses a novel pathway distinct from PIN1
J. Kleine Vehn, P. Dhonukshe, R. Swarup, M. Bennett, J. Friml, Plant Cell 18 (2006) 3171–3181.
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| DOI
J. Kleine Vehn, P. Dhonukshe, R. Swarup, M. Bennett, J. Friml, Plant Cell 18 (2006) 3171–3181.
2006 | Journal Article | IST-REx-ID: 3020
In situ hybridization technique for mRNA detection in whole mount Arabidopsis samples
J. Hejátko, I. Blilou, P. Brewer, J. Friml, B. Scheres, E. Benková, Nature Protocols 1 (2006) 1939–1946.
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| DOI
J. Hejátko, I. Blilou, P. Brewer, J. Friml, B. Scheres, E. Benková, Nature Protocols 1 (2006) 1939–1946.
2006 | Journal Article | IST-REx-ID: 3152
In vivo migration A germ cell perspective
P. Kunwar, D.E. Siekhaus, R. Lehmann, Annual Review of Cell and Developmental Biology 22 (2006) 237–265.
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P. Kunwar, D.E. Siekhaus, R. Lehmann, Annual Review of Cell and Developmental Biology 22 (2006) 237–265.
2006 | Conference Paper | IST-REx-ID: 3180
A comparative study of energy minimization methods for Markov random fields
R. Szeliski, R. Zabih, D. Scharstein, O. Veksler, V. Kolmogorov, A. Agarwala, M. Tappen, C. Rother, in:, Springer, 2006, pp. 16–29.
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R. Szeliski, R. Zabih, D. Scharstein, O. Veksler, V. Kolmogorov, A. Agarwala, M. Tappen, C. Rother, in:, Springer, 2006, pp. 16–29.
2006 | Conference Paper | IST-REx-ID: 3184
Comparison of energy minimization algorithms for highly connected graphs
V. Kolmogorov, C. Rother, in:, Springer, 2006, pp. 1–15.
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V. Kolmogorov, C. Rother, in:, Springer, 2006, pp. 1–15.
2006 | Journal Article | IST-REx-ID: 3185
Probabilistic fusion of stereo with color and contrast for bilayer segmentation
V. Kolmogorov, A. Criminisi, A. Blake, G. Cross, C. Rother, IEEE Transactions on Pattern Analysis and Machine Intelligence 28 (2006) 1480–1492.
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V. Kolmogorov, A. Criminisi, A. Blake, G. Cross, C. Rother, IEEE Transactions on Pattern Analysis and Machine Intelligence 28 (2006) 1480–1492.
2006 | Conference Paper | IST-REx-ID: 3186
An integral solution to surface evolution PDEs via geo cuts
Y. Boykov, V. Kolmogorov, D. Cremers, A. Delong, in:, Springer, 2006, pp. 409–422.
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| DOI
Y. Boykov, V. Kolmogorov, D. Cremers, A. Delong, in:, Springer, 2006, pp. 409–422.
2006 | Conference Paper | IST-REx-ID: 3188
Cosegmentation of image pairs by histogram matching - Incorporating a global constraint into MRFs
C. Rother, V. Kolmogorov, T. Minka, A. Blake, in:, IEEE, 2006, pp. 993–1000.
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| DOI
C. Rother, V. Kolmogorov, T. Minka, A. Blake, in:, IEEE, 2006, pp. 993–1000.
2006 | Conference Paper | IST-REx-ID: 3189
Bilayer segmentation of live video
A. Criminisi, G. Cross, A. Blake, V. Kolmogorov, in:, IEEE, 2006, pp. 53–60.
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A. Criminisi, G. Cross, A. Blake, V. Kolmogorov, in:, IEEE, 2006, pp. 53–60.
2006 | Journal Article | IST-REx-ID: 3190
Convergent tree reweighted message passing for energy minimization
V. Kolmogorov, IEEE Transactions on Pattern Analysis and Machine Intelligence 28 (2006) 1568–1583.
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V. Kolmogorov, IEEE Transactions on Pattern Analysis and Machine Intelligence 28 (2006) 1568–1583.
2006 | Conference Paper | IST-REx-ID: 3214
Luby Rackoff ciphers from weak round functions
U. Maurer, Y. Oswald, K.Z. Pietrzak, J. Sjödin, in:, Springer, 2006, pp. 391–408.
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U. Maurer, Y. Oswald, K.Z. Pietrzak, J. Sjödin, in:, Springer, 2006, pp. 391–408.
2006 | Conference Paper | IST-REx-ID: 3215
Separating sources for encryption and secret sharing
Y. Dodis, K.Z. Pietrzak, B. Przydatek, in:, Springer, 2006, pp. 601–616.
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Y. Dodis, K.Z. Pietrzak, B. Przydatek, in:, Springer, 2006, pp. 601–616.
2006 | Conference Paper | IST-REx-ID: 3216
A tight bound for EMAC
K.Z. Pietrzak, in:, Springer, 2006, pp. 168–179.
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K.Z. Pietrzak, in:, Springer, 2006, pp. 168–179.
2006 | Conference Paper | IST-REx-ID: 3217
Composition implies adaptive security in minicrypt
K.Z. Pietrzak, in:, Springer, 2006, pp. 328–338.
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K.Z. Pietrzak, in:, Springer, 2006, pp. 328–338.
2006 | Book Chapter | IST-REx-ID: 3404
Atomic force microscopy
H.L. Janovjak, R. Sawhney, M. Stark, D. Mueller, in:, Techniques in Microscopy for Biomedical Applications, World Scientific Publishing, 2006, pp. 213–284.
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H.L. Janovjak, R. Sawhney, M. Stark, D. Mueller, in:, Techniques in Microscopy for Biomedical Applications, World Scientific Publishing, 2006, pp. 213–284.
2006 | Journal Article | IST-REx-ID: 3413
Bacteriorhodopsin folds into the membrane against an external force
M. Kessler, K. Gottschalk, H.L. Janovjak, D. Mueller, H. Gaub, Journal of Molecular Biology 357 (2006) 644–654.
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M. Kessler, K. Gottschalk, H.L. Janovjak, D. Mueller, H. Gaub, Journal of Molecular Biology 357 (2006) 644–654.
2006 | Journal Article | IST-REx-ID: 3414
Observing folding pathways and kinetics of a single sodium-proton antiporter from Escherichia coli
A. Kedrov, H.L. Janovjak, C. Ziegler, W. Kühlbrandt, D. Mueller, Journal of Molecular Biology 355 (2006) 2–8.
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A. Kedrov, H.L. Janovjak, C. Ziegler, W. Kühlbrandt, D. Mueller, Journal of Molecular Biology 355 (2006) 2–8.
2006 | Book Review | IST-REx-ID: 3415
Imaging and detecting molecular interactions of single membrane proteins
H.L. Janovjak, A. Kedrov, D. Cisneros, T. Sapra, J. Struckmeier, D. Mueller, Neurobiology of Aging 27 (2006) 546–561.
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H.L. Janovjak, A. Kedrov, D. Cisneros, T. Sapra, J. Struckmeier, D. Mueller, Neurobiology of Aging 27 (2006) 546–561.
2006 | Preprint | IST-REx-ID: 3431 |
Ising models for networks of real neurons
G. Tkačik, E. Schneidman, M. Berry, W. Bialek, ArXiv (2006) 1–4.
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G. Tkačik, E. Schneidman, M. Berry, W. Bialek, ArXiv (2006) 1–4.
2006 | Journal Article | IST-REx-ID: 3437
Fitness effects of beneficial mutations: the mutational landscape model in experimental evolution
A. Betancourt, J.P. Bollback, Current Opinion in Genetics & Development 16 (2006) 618–623.
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A. Betancourt, J.P. Bollback, Current Opinion in Genetics & Development 16 (2006) 618–623.
2006 | Conference Paper | IST-REx-ID: 3449
Games for controls
K. Chatterjee, R. Jagadeesan, C. Pitcher, in:, IEEE, 2006, pp. 70–82.
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K. Chatterjee, R. Jagadeesan, C. Pitcher, in:, IEEE, 2006, pp. 70–82.
2006 | Book Review | IST-REx-ID: 3463
Timing and efficacy of transmitter release at mossy fiber synapses in the hippocampal network. (Review)
J. Bischofberger, D. Engel, M. Frotscher, P.M. Jonas, Pflugers Archiv : European Journal of Physiology 453 (2006) 361–372.
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J. Bischofberger, D. Engel, M. Frotscher, P.M. Jonas, Pflugers Archiv : European Journal of Physiology 453 (2006) 361–372.
2006 | Patent | IST-REx-ID: 3510
Method, apparatus and computer program products for automatically generating NURBS models of triangulated surfaces using homeomorphism
H. Edelsbrunner, P. Fu, D. Nekhayev, M. Facello, S. Williams, (2006).
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H. Edelsbrunner, P. Fu, D. Nekhayev, M. Facello, S. Williams, (2006).
2006 | Patent | IST-REx-ID: 3511
Manufacturing methods and systems for rapid production of hearing-aid shells
P. Fu, D. Nekhayev, H. Edelsbrunner, (2006).
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P. Fu, D. Nekhayev, H. Edelsbrunner, (2006).
2006 | Patent | IST-REx-ID: 3512
Method, apparatus and computer products that reconstruct surfaces from data points
Y. Fletcher, T. Gloth, H. Edelsbrunner, P. Fu, (2006).
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Y. Fletcher, T. Gloth, H. Edelsbrunner, P. Fu, (2006).
2006 | Journal Article | IST-REx-ID: 3522
Place-selective firing of CA1 pyramidal cells during sharp wave/ripple network patterns in exploratory behavior
J. O’Neill, T. Senior, J.L. Csicsvari, Neuron 49 (2006) 143–155.
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J. O’Neill, T. Senior, J.L. Csicsvari, Neuron 49 (2006) 143–155.
2006 | Journal Article | IST-REx-ID: 3545
Changes in functional connectivity within the rat striatopallidal axis during global brain activation in vivo
P. Magill, A. Pogosyan, A. Sharott, J.L. Csicsvari, J. Bolam, P. Brown, Journal of Neuroscience 26 (2006) 6318–6329.
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P. Magill, A. Pogosyan, A. Sharott, J.L. Csicsvari, J. Bolam, P. Brown, Journal of Neuroscience 26 (2006) 6318–6329.
2006 | Conference Paper | IST-REx-ID: 3559
Vines and vineyards by updating persistence in linear time
D. Cohen Steiner, H. Edelsbrunner, D. Morozov, in:, ACM, 2006, pp. 119–126.
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| DOI
D. Cohen Steiner, H. Edelsbrunner, D. Morozov, in:, ACM, 2006, pp. 119–126.
2006 | Conference Paper | IST-REx-ID: 3560
Persistence-sensitive simplification of functions on 2-manifolds
H. Edelsbrunner, D. Morozov, V. Pascucci, in:, ACM, 2006, pp. 127–134.
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H. Edelsbrunner, D. Morozov, V. Pascucci, in:, ACM, 2006, pp. 127–134.
2006 | Book Review | IST-REx-ID: 3594
Hybridisation between red and sika deer in Scotland
J. Pemberton, G. Swanson, N.H. Barton, S. Livingstone, H. Senn, Deer 13 (2006) 22–26.
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J. Pemberton, G. Swanson, N.H. Barton, S. Livingstone, H. Senn, Deer 13 (2006) 22–26.
2006 | Conference Paper | IST-REx-ID: 3499
Nash equilibrium for upward-closed objectives
K. Chatterjee, in:, Springer, 2006, pp. 271–286.
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K. Chatterjee, in:, Springer, 2006, pp. 271–286.
2006 | Conference Paper | IST-REx-ID: 3500
Algorithms for Büchi Games
K. Chatterjee, T.A. Henzinger, N. Piterman, in:, ACM, 2006.
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K. Chatterjee, T.A. Henzinger, N. Piterman, in:, ACM, 2006.
2006 | Conference Paper | IST-REx-ID: 4549
Compositional quantitative reasoning
K. Chatterjee, L. De Alfaro, M. Faella, T.A. Henzinger, R. Majumdar, M. Stoelinga, in:, IEEE, 2006, pp. 179–188.
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| DOI
K. Chatterjee, L. De Alfaro, M. Faella, T.A. Henzinger, R. Majumdar, M. Stoelinga, in:, IEEE, 2006, pp. 179–188.
2006 | Journal Article | IST-REx-ID: 4550
Games with secure equilibria
K. Chatterjee, T.A. Henzinger, M. Jurdziński, Theoretical Computer Science 365 (2006) 67–82.
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K. Chatterjee, T.A. Henzinger, M. Jurdziński, Theoretical Computer Science 365 (2006) 67–82.
2006 | Conference Paper | IST-REx-ID: 4551
Markov decision processes with multiple objectives
K. Chatterjee, R. Majumdar, T.A. Henzinger, in:, Springer, 2006, pp. 325–336.
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K. Chatterjee, R. Majumdar, T.A. Henzinger, in:, Springer, 2006, pp. 325–336.
2006 | Conference Paper | IST-REx-ID: 4552
Strategy improvement for concurrent reachability games
K. Chatterjee, L. De Alfaro, T.A. Henzinger, in:, IEEE, 2006, pp. 291–300.
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K. Chatterjee, L. De Alfaro, T.A. Henzinger, in:, IEEE, 2006, pp. 291–300.
2006 | Conference Paper | IST-REx-ID: 4574
Lazy shape analysis
D. Beyer, T.A. Henzinger, G. Théoduloz, in:, Springer, 2006, pp. 532–546.
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D. Beyer, T.A. Henzinger, G. Théoduloz, in:, Springer, 2006, pp. 532–546.
2006 | Book Chapter | IST-REx-ID: 3722
Rastersondenmikroskopie
H.L. Janovjak, D. Mueller, in:, Bioanalytik, Spektrum Akademischer Verlag, 2006.
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H.L. Janovjak, D. Mueller, in:, Bioanalytik, Spektrum Akademischer Verlag, 2006.
2006 | Journal Article | IST-REx-ID: 3728
Pulling single bacteriorhodopsin out of a membrane: Comparison of simulation and experiment
M. Cieplak, S. Filipek, H.L. Janovjak, K. Krzysko, Biochimica et Biophysica Acta (BBA) - Biomembranes 1758 (2006) 537–544.
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| DOI
M. Cieplak, S. Filipek, H.L. Janovjak, K. Krzysko, Biochimica et Biophysica Acta (BBA) - Biomembranes 1758 (2006) 537–544.
2006 | Journal Article | IST-REx-ID: 3729
Direct measurement of single-molecule visco-elasticity in atomic force microscope force-extension experiments
C. Bippes, A. Humphris, M. Stark, D. Mueller, H.L. Janovjak, European Biophysics Journal 35 (2006) 287–292.
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| DOI
C. Bippes, A. Humphris, M. Stark, D. Mueller, H.L. Janovjak, European Biophysics Journal 35 (2006) 287–292.