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8978 Publications


2018 | Journal Article | IST-REx-ID: 6009 | OA
Algorithms for algebraic path properties in concurrent systems of constant treewidth components
K. Chatterjee, R. Ibsen-Jensen, A.K. Goharshady, A. Pavlogiannis, ACM Transactions on Programming Languages and Systems 40 (2018).
[Preprint] View | Files available | DOI | Download Preprint (ext.) | WoS | arXiv
 

2018 | Conference Paper | IST-REx-ID: 5977 | OA
Computational approaches for stochastic shortest path on succinct MDPs
K. Chatterjee, H. Fu, A.K. Goharshady, N. Okati, in:, Proceedings of the Twenty-Seventh International Joint Conference on Artificial Intelligence, IJCAI, 2018, pp. 4700–4707.
[Preprint] View | Files available | DOI | Download Preprint (ext.) | WoS | arXiv
 

2018 | Journal Article | IST-REx-ID: 422 | OA
Relaminarization by steady modification of the streamwise velocity profile in a pipe
J. Kühnen, D. Scarselli, M. Schaner, B. Hof, Flow Turbulence and Combustion 100 (2018) 919–942.
[Published Version] View | Files available | DOI | WoS
 

2018 | Journal Article | IST-REx-ID: 461 | OA
Destabilizing turbulence in pipe flow
J. Kühnen, B. Song, D. Scarselli, N.B. Budanur, M. Riedl, A. Willis, M. Avila, B. Hof, Nature Physics 14 (2018) 386–390.
[Preprint] View | Files available | DOI | Download Preprint (ext.) | WoS
 

2018 | Journal Article | IST-REx-ID: 449 | OA
WRKY23 is a component of the transcriptional network mediating auxin feedback on PIN polarity
T. Prat, J. Hajny, W. Grunewald, M.K. Vasileva, G. Molnar, R. Tejos, M. Schmid, M. Sauer, J. Friml, PLoS Genetics 14 (2018).
[Published Version] View | Files available | DOI | WoS
 

2018 | Journal Article | IST-REx-ID: 191 | OA
PID/WAG-mediated phosphorylation of the Arabidopsis PIN3 auxin transporter mediates polarity switches during gravitropism
P. Grones, M.F. Abas, J. Hajny, A. Jones, S. Waidmann, J. Kleine Vehn, J. Friml, Scientific Reports 8 (2018).
[Published Version] View | Files available | DOI | WoS
 

2018 | Journal Article | IST-REx-ID: 47
Transporters and mechanisms of hormone transport in arabidopsis
R. Abualia, E. Benková, B. Lacombe, Advances in Botanical Research 87 (2018) 115–138.
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2018 | Journal Article | IST-REx-ID: 15 | OA
Chemokines and integrins independently tune actin flow and substrate friction during intranodal migration of T cells
M. Hons, A. Kopf, R. Hauschild, A.F. Leithner, F.R. Gärtner, J. Abe, J. Renkawitz, J. Stein, M.K. Sixt, Nature Immunology 19 (2018) 606–616.
[Published Version] View | Files available | DOI | Download Published Version (ext.) | WoS | PubMed | Europe PMC
 

2018 | Journal Article | IST-REx-ID: 28
Incorrect trafficking route leads to autism
X. Contreras, S. Hippenmeyer, Brain a Journal of Neurology 141 (2018) 2542–2544.
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2018 | Journal Article | IST-REx-ID: 442 | OA [Published Version] View | Files available | DOI
 

2018 | Journal Article | IST-REx-ID: 3 | OA
Haploinsufficiency of the intellectual disability gene SETD5 disturbs developmental gene expression and cognition
E. Deliu, N. Arecco, J. Morandell, C. Dotter, X. Contreras, C. Girardot, E. Käsper, A. Kozlova, K. Kishi, I. Chiaradia, K. Noh, G. Novarino, Nature Neuroscience 21 (2018) 1717–1727.
[Submitted Version] View | Files available | DOI | WoS
 

2018 | Journal Article | IST-REx-ID: 2 | OA
Indirect reciprocity with private, noisy, and incomplete information
C. Hilbe, L. Schmid, J. Tkadlec, K. Chatterjee, M. Nowak, PNAS 115 (2018) 12241–12246.
[Submitted Version] View | Files available | DOI | Download Submitted Version (ext.) | WoS | PubMed | Europe PMC
 

2018 | Journal Article | IST-REx-ID: 67 | OA
Evolutionary potential of transcription factors for gene regulatory rewiring
C. Igler, M. Lagator, G. Tkačik, J.P. Bollback, C.C. Guet, Nature Ecology and Evolution 2 (2018) 1633–1643.
[Submitted Version] View | Files available | DOI | WoS
 

2018 | Research Data | IST-REx-ID: 5585 | OA
Data for the paper Evolutionary potential of transcription factors for gene regulatory rewiring
C. Igler, M. Lagator, G. Tkačik, J.P. Bollback, C.C. Guet, (2018).
[Published Version] View | Files available | DOI
 

2017 | Journal Article | IST-REx-ID: 1013 | OA [Published Version] View | Files available | DOI
 

2017 | Journal Article | IST-REx-ID: 10126 | OA
Curvature mediated interactions in highly curved membranes
A. Vahid Belarghou, A. Šarić, T. Idema, Biophysical Journal 112 (2017).
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2017 | Journal Article | IST-REx-ID: 10175 | OA
Homogenization of nonconvex unbounded singular integrals
O. Anza Hafsa, N. Clozeau, J.-P. Mandallena, Annales Mathématiques Blaise Pascal 24 (2017) 135–193.
[Published Version] View | Files available | DOI
 

2017 | Journal Article | IST-REx-ID: 103 | OA
Transport signatures of quasiparticle poisoning in a majorana island
S.M. Albrecht, E. Hansen, A.P. Higginbotham, F. Kuemmeth, T. Jespersen, J. Nygård, P. Krogstrup, J. Danon, K. Flensberg, C. Marcus, APS Physics, Physical Review Letters 118 (2017).
[Preprint] View | DOI | Download Preprint (ext.) | arXiv
 

2017 | Journal Article | IST-REx-ID: 10370 | OA
Mechanical force induces mitochondrial fission
S.C.J. Helle, Q. Feng, M.J. Aebersold, L. Hirt, R.R. Grüter, A. Vahid, A. Sirianni, S. Mostowy, J.G. Snedeker, A. Šarić, T. Idema, T. Zambelli, B. Kornmann, ELife 6 (2017).
[Published Version] View | Files available | DOI | Download Published Version (ext.) | PubMed | Europe PMC
 

2017 | Journal Article | IST-REx-ID: 10369 | OA
Long-range organization of membrane-curving proteins
M. Simunovic, A. Šarić, J.M. Henderson, K.Y.C. Lee, G.A. Voth, ACS Central Science 3 (2017) 1246–1253.
[Published Version] View | Files available | DOI | Download Published Version (ext.) | PubMed | Europe PMC
 

2017 | Journal Article | IST-REx-ID: 10373 | OA
Numerical evidence for thermally induced monopoles
P. Wirnsberger, D. Fijan, R.A. Lightwood, A. Šarić, C. Dellago, D. Frenkel, Proceedings of the National Academy of Sciences 114 (2017) 4911–4914.
[Published Version] View | DOI | Download Published Version (ext.) | PubMed | Europe PMC | arXiv
 

2017 | Journal Article | IST-REx-ID: 10374 | OA
Scaling behaviour and rate-determining steps in filamentous self-assembly
G. Meisl, L. Rajah, S.A.I. Cohen, M. Pfammatter, A. Šarić, E. Hellstrand, A.K. Buell, A. Aguzzi, S. Linse, M. Vendruscolo, C.M. Dobson, T.P.J. Knowles, Chemical Science 8 (2017) 7087–7097.
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2017 | Journal Article | IST-REx-ID: 10375 | OA
Curvature variation controls particle aggregation on fluid vesicles
A. Vahid, A. Šarić, T. Idema, Soft Matter 13 (2017) 4924–4930.
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2017 | Journal Article | IST-REx-ID: 10418 | OA
A new proof rule for almost-sure termination
A. Mciver, C. Morgan, B.L. Kaminski, J.P. Katoen, Proceedings of the ACM on Programming Languages 2 (2017).
[Published Version] View | DOI | Download Published Version (ext.) | arXiv
 

2017 | Thesis | IST-REx-ID: 10663 | OA
Magnetic force microscopy studies of mesoscopic superconducting structures
H. Polshyn, Magnetic Force Microscopy Studies of Mesoscopic Superconducting Structures, University of Illinois at Urbana-Champaign, 2017.
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2017 | Conference Paper | IST-REx-ID: 10745 | OA
Probing and controlling fluxoid states in multiply-connected mesoscopic superconducting structures
H. Polshyn, T. Naibert, R. Budakian, in:, APS March Meeting 2017, American Physical Society, 2017.
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2017 | Book Chapter | IST-REx-ID: 1075 | OA
An American in Allied-occupied Austria: John Dos Passos Reports on "The Vienna Frontier"
B. Wenzl, in:, J. Parker, R. Poole (Eds.), Austria and America: 20th-Century Cross-Cultural Encounters, LIT Verlag Berlin-Münster-Wien-Zürich-London, 2017, pp. 73–80.
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2017 | Journal Article | IST-REx-ID: 11066 | OA
Nup98 recruits the Wdr82–Set1A/COMPASS complex to promoters to regulate H3K4 trimethylation in hematopoietic progenitor cells
T.M. Franks, A. McCloskey, M.N. Shokhirev, C. Benner, A. Rathore, M. Hetzer, Genes & Development 31 (2017) 2222–2234.
[Published Version] View | DOI | Download Published Version (ext.) | PubMed | Europe PMC
 

2017 | Journal Article | IST-REx-ID: 11067 | OA
Nup153 interacts with Sox2 to enable bimodal gene regulation and maintenance of neural progenitor cells
T. Toda, J.Y. Hsu, S.B. Linker, L. Hu, S.T. Schafer, J. Mertens, F.V. Jacinto, M. Hetzer, F.H. Gage, Cell Stem Cell 21 (2017) 618–634.e7.
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2017 | Journal Article | IST-REx-ID: 11065 | OA
Nucleolar expansion and elevated protein translation in premature aging
A. Buchwalter, M. Hetzer, Nature Communications 8 (2017).
[Published Version] View | DOI | Download Published Version (ext.) | PubMed | Europe PMC
 

2017 | Conference Paper | IST-REx-ID: 1112
An application of stochastic differential equations to evolutionary algorithms
T. Paixao, J. Pérez Heredia, in:, Proceedings of the 14th ACM/SIGEVO Conference on Foundations of Genetic Algorithms, ACM, 2017, pp. 3–11.
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2017 | Journal Article | IST-REx-ID: 11518 | OA
ALMA reveals metals yet no dust within multiple components in CR7
J.J. Matthee, D. Sobral, F. Boone, H. Röttgering, D. Schaerer, M. Girard, A. Pallottini, L. Vallini, A. Ferrara, B. Darvish, B. Mobasher, The Astrophysical Journal 851 (2017).
[Preprint] View | DOI | Download Preprint (ext.) | arXiv
 

2017 | Journal Article | IST-REx-ID: 11562 | OA
The CALYMHA survey: Lyα luminosity function and global escape fraction of Lyα photons at z = 2.23
D. Sobral, J.J. Matthee, P. Best, A. Stroe, H. Röttgering, I. Oteo, I. Smail, L. Morabito, A. Paulino-Afonso, Monthly Notices of the Royal Astronomical Society 466 (2017) 1242–1258.
[Preprint] View | DOI | Download Preprint (ext.) | arXiv
 

2017 | Journal Article | IST-REx-ID: 11566 | OA
A 1.4 deg2 blind survey for C II], C III] and C IV at z ∼ 0.7–1.5 – I. Nature, morphologies and equivalent widths
A. Stroe, D. Sobral, J.J. Matthee, J. Calhau, I. Oteo, Monthly Notices of the Royal Astronomical Society 471 (2017) 2558–2574.
[Preprint] View | DOI | Download Preprint (ext.) | arXiv
 

2017 | Journal Article | IST-REx-ID: 11564 | OA
The production and escape of Lyman-Continuum radiation from star-forming galaxies at z ∼ 2 and their redshift evolution
J.J. Matthee, D. Sobral, P. Best, A.A. Khostovan, I. Oteo, R. Bouwens, H. Röttgering, Monthly Notices of the Royal Astronomical Society 465 (2017) 3637–3655.
[Preprint] View | DOI | Download Preprint (ext.) | arXiv
 

2017 | Journal Article | IST-REx-ID: 11567 | OA
A 1.4 deg2 blind survey for C II], C III] and C IV at z ∼ 0.7–1.5 – II. Luminosity functions and cosmic average line ratios
A. Stroe, D. Sobral, J.J. Matthee, J. Calhau, I. Oteo, Monthly Notices of the Royal Astronomical Society 471 (2017) 2575–2586.
[Preprint] View | DOI | Download Preprint (ext.) | arXiv
 

2017 | Journal Article | IST-REx-ID: 11565 | OA
The origin of scatter in the stellar mass–halo mass relation of central galaxies in the EAGLE simulation
J.J. Matthee, J. Schaye, R.A. Crain, M. Schaller, R. Bower, T. Theuns, Monthly Notices of the Royal Astronomical Society 465 (2017) 2381–2396.
[Preprint] View | DOI | Download Preprint (ext.) | arXiv
 

2017 | Journal Article | IST-REx-ID: 11561 | OA
Boötes-HiZELS: An optical to near-infrared survey of emission-line galaxies at z = 0.4–4.7
J.J. Matthee, D. Sobral, P. Best, I. Smail, F. Bian, B. Darvish, H. Röttgering, X. Fan, Monthly Notices of the Royal Astronomical Society 471 (2017) 629–649.
[Preprint] View | DOI | Download Preprint (ext.) | arXiv
 

2017 | Journal Article | IST-REx-ID: 11572 | OA
Spectroscopic properties of luminous Ly α emitters at z ≈ 6–7 and comparison to the Lyman-break population
J.J. Matthee, D. Sobral, B. Darvish, S. Santos, B. Mobasher, A. Paulino-Afonso, H. Röttgering, L. Alegre, Monthly Notices of the Royal Astronomical Society 472 (2017) 772–787.
[Preprint] View | DOI | Download Preprint (ext.) | arXiv
 

2017 | Journal Article | IST-REx-ID: 11573 | OA
The KMOS Deep Survey (KDS) – I. Dynamical measurements of typical star-forming galaxies at z ≃ 3.5
O.J. Turner, M. Cirasuolo, C.M. Harrison, R.J. McLure, J.S. Dunlop, A.M. Swinbank, H.L. Johnson, D. Sobral, J.J. Matthee, R.M. Sharples, Monthly Notices of the Royal Astronomical Society 471 (2017) 1280–1320.
[Preprint] View | DOI | Download Preprint (ext.) | arXiv
 

2017 | Preprint | IST-REx-ID: 11633 | OA
FliPer: Checking the reliability of global seismic parameters from automatic pipelines
L.A. Bugnet, R.A. Garcia, G.R. Davies, S. Mathur, E. Corsaro, ArXiv (n.d.).
[Preprint] View | DOI | Download Preprint (ext.) | arXiv
 

2017 | Conference Paper | IST-REx-ID: 11651 | OA
Capacity releasing diffusion for speed and locality
D. Wang, K. Fountoulakis, M.H. Henzinger, M.W. Mahoney, Satish Rao , in:, Proceedings of the 34th International Conference on Machine Learning, ML Research Press, 2017, pp. 3598–3607.
[Published Version] View | Download Published Version (ext.) | arXiv
 

2017 | Journal Article | IST-REx-ID: 11665 | OA
Sublinear-time maintenance of breadth-first spanning trees in partially dynamic networks
M.H. Henzinger, S. Krinninger, D. Nanongkai, ACM Transactions on Algorithms 13 (2017).
[Preprint] View | DOI | Download Preprint (ext.) | arXiv
 

2017 | Journal Article | IST-REx-ID: 11676 | OA
Maximizing a submodular function with viability constraints
W. Dvořák, M.H. Henzinger, D.P. Williamson, Algorithmica 77 (2017) 152–172.
[Preprint] View | DOI | Download Preprint (ext.) | arXiv
 

2017 | Conference Paper | IST-REx-ID: 1175 | OA
Cumulative space in black-white pebbling and resolution
J.F. Alwen, S. De Rezende, J. Nordstrom, M. Vinyals, in:, C. Papadimitriou (Ed.), Schloss Dagstuhl - Leibniz-Zentrum für Informatik, 2017, p. 38:1-38-21.
[Published Version] View | Files available | DOI
 

2017 | Conference Paper | IST-REx-ID: 11772
The state of the art in dynamic graph algorithms
M.H. Henzinger, in:, 44th International Conference on Current Trends in Theory and Practice of Computer Science, Springer Nature, 2017, pp. 40–44.
View | DOI
 

2017 | Conference Paper | IST-REx-ID: 11829 | OA
Conditional hardness for sensitivity problems
M.H. Henzinger, A. Lincoln, S. Neumann, V. Vassilevska Williams, in:, 8th Innovations in Theoretical Computer Science Conference, Schloss Dagstuhl - Leibniz-Zentrum für Informatik, 2017.
[Published Version] View | DOI | Download Published Version (ext.) | arXiv
 

2017 | Conference Paper | IST-REx-ID: 11833 | OA
The power of vertex sparsifiers in dynamic graph algorithms
G. Goranci, M.H. Henzinger, P. Peng, in:, 25th Annual European Symposium on Algorithms, Schloss Dagstuhl - Leibniz-Zentrum für Informatik, 2017.
[Published Version] View | DOI | Download Published Version (ext.) | arXiv
 

2017 | Conference Paper | IST-REx-ID: 11832 | OA
Dynamic clustering to minimize the sum of radii
M.H. Henzinger, D. Leniowski, C. Mathieu, in:, 25th Annual European Symposium on Algorithms, Schloss Dagstuhl - Leibniz-Zentrum für Informatik, 2017.
[Published Version] View | DOI | Download Published Version (ext.) | arXiv
 

2017 | Conference Paper | IST-REx-ID: 11874 | OA
Fully dynamic approximate maximum matching and minimum vertex cover in o(log3 n) worst case update time
S. Bhattacharya, M.H. Henzinger, D. Nanongkai, in:, 28th Annual ACM-SIAM Symposium on Discrete Algorithms, Society for Industrial and Applied Mathematics, 2017, pp. 470–489.
[Preprint] View | DOI | Download Preprint (ext.) | arXiv
 

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