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5497 Publications


2019 | Journal Article | IST-REx-ID: 6980   OA
Tissue rheology in embryonic organization
N. Petridou, C.-P.J. Heisenberg, The EMBO Journal 38 (2019).
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2019 | Thesis | IST-REx-ID: 6891
The implication of cytoskeletal dynamics on leukocyte migration
A. Kopf, The Implication of Cytoskeletal Dynamics on Leukocyte Migration, IST Austria, 2019.
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2019 | Journal Article | IST-REx-ID: 6877
The neural crest pitches in to remove apoptotic debris
A. Kopf, M.K. Sixt, Cell 179 (2019) 51–53.
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2019 | Journal Article | IST-REx-ID: 7109
From real-time logic to timed automata
T. Ferrere, O. Maler, D. Ničković, A. Pnueli, Journal of the ACM 66 (2019).
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2019 | Conference Paper | IST-REx-ID: 7147
Transient memory in gene regulation
C.C. Guet, T.A. Henzinger, C. Igler, T. Petrov, A. Sezgin, in:, 17th International Conference on Computational Methods in Systems Biology, Springer Nature, 2019, pp. 155–187.
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2019 | Conference Paper | IST-REx-ID: 7159
Shape expressions for specifying and extracting signal features
D. Ničković, X. Qin, T. Ferrere, C. Mateis, J. Deshmukh, in:, 19th International Conference on Runtime Verification, Springer Nature, 2019, pp. 292–309.
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2019 | Journal Article | IST-REx-ID: 7180   OA
Brassinosteroid signaling delimits root gravitropism via sorting of the Arabidopsis PIN2 auxin transporter
K. Retzer, M. Akhmanova, N. Konstantinova, K. Malínská, J. Leitner, J. Petrášek, C. Luschnig, Nature Communications 10 (2019).
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2019 | Conference Paper | IST-REx-ID: 7231   OA
Piecewise robust barrier tubes for nonlinear hybrid systems with uncertainty
H. Kong, E. Bartocci, Y. Jiang, T.A. Henzinger, in:, Lecture Notes in Computer Science (Including Subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics), Springer Nature, 2019, pp. 123–141.
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2019 | Journal Article | IST-REx-ID: 6752
Infinite-duration bidding games
G. Avni, T.A. Henzinger, V.K. Chonev, Journal of the ACM 66 (2019).
View | Files available | DOI | Download (ext.) | arXiv
 

2019 | Journal Article | IST-REx-ID: 7281
Mutual conservation of redox mediator and singlet oxygen quencher in Lithium–Oxygen batteries
W.-J. Kwak, S.A. Freunberger, H. Kim, J. Park, T.T. Nguyen, H.-G. Jung, H.R. Byon, Y.-K. Sun, ACS Catalysis 9 (2019) 9914–9922.
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2019 | Journal Article | IST-REx-ID: 6194
The entorhinal cognitive map is attracted to goals
C.N. Boccara, M. Nardin, F. Stella, J. O’Neill, J.L. Csicsvari, Science 363 (2019) 1443–1447.
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2019 | Research Data | IST-REx-ID: 6062   OA
Supplementary Code and Data for the paper "The Entorhinal Cognitive Map is Attracted to Goals"
M. Nardin, Supplementary Code and Data for the Paper “The Entorhinal Cognitive Map Is Attracted to Goals,” IST Austria, 2019.
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2019 | Journal Article | IST-REx-ID: 7421
A reciprocal translocation radically reshapes sex‐linked inheritance in the common frog
M.A. Toups, N. Rodrigues, N. Perrin, M. Kirkpatrick, Molecular Ecology 28 (2019) 1877–1889.
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2019 | Conference Paper | IST-REx-ID: 7402   OA
Graph planning with expected finite horizon
K. Chatterjee, L. Doyen, in:, 34th Annual ACM/IEEE Symposium on Logic in Computer Science, IEEE, 2019, pp. 1–13.
View | DOI | Download (ext.) | arXiv
 

2019 | Journal Article | IST-REx-ID: 7399   OA
The Airn lncRNA does not require any DNA elements within its locus to silence distant imprinted genes
D. Andergassen, M. Muckenhuber, P.C. Bammer, T.M. Kulinski, H.-C. Theussl, T. Shimizu, J.M. Penninger, F. Pauler, Q.J. Hudson, PLOS Genetics 15 (2019) e1008268.
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2019 | Journal Article | IST-REx-ID: 7414
S.16.03 A homozygous missense mutation in SLC7A5 leads to autism spectrum disorder and microcephaly
L. Knaus, D.-C. Tarlungeanu, G. Novarino, European Neuropsychopharmacology 29 (2019) S11.
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2019 | Journal Article | IST-REx-ID: 7394
Editorial overview: Cell biology in the era of omics?
E. Benková, Y. Dagdas, Current Opinion in Plant Biology 52 (2019) A1–A2.
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2019 | Journal Article | IST-REx-ID: 7476   OA
Tracing the cellular dynamics of sebaceous gland development in normal and perturbed states
M.S. Andersen, E.B. Hannezo, S. Ulyanchenko, S. Estrach, Y. Antoku, S. Pisano, K.E. Boonekamp, S. Sendrup, M. Maimets, M.T. Pedersen, J.V. Johansen, D.L. Clement, C.C. Feral, B.D. Simons, K.B. Jensen, Nature Cell Biology 21 (2019) 924–932.
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2019 | Journal Article | IST-REx-ID: 7034   OA
Counterexample to an extension of the Hanani-Tutte theorem on the surface of genus 4
R. Fulek, J. Kynčl, Combinatorica 39 (2019) 1267–1279.
View | DOI | Download (ext.) | arXiv
 

2019 | Thesis | IST-REx-ID: 6269   OA
Clathrin-Mediated endocytosis, post-endocytic trafficking and their regulatory controls in plants
M. Narasimhan, Clathrin-Mediated Endocytosis, Post-Endocytic Trafficking and Their Regulatory Controls in Plants , IST Austria, 2019.
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2019 | Journal Article | IST-REx-ID: 6310   OA
Counting rational points on biquadratic hypersurfaces
T.D. Browning, L.Q. Hu, Advances in Mathematics 349 (2019) 920–940.
View | Files available | DOI | arXiv
 

2019 | Journal Article | IST-REx-ID: 6240   OA
Location of the spectrum of Kronecker random matrices
J. Alt, L. Erdös, T.H. Krüger, Y. Nemish, Annales de l’institut Henri Poincare 55 (2019) 661–696.
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2019 | Journal Article | IST-REx-ID: 5906
Analytically solvable renormalization group for the many-body localization transition
A. Goremykina, R. Vasseur, M. Serbyn, Physical Review Letters 122 (2019) 040601.
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2019 | Journal Article | IST-REx-ID: 6187   OA
A conserved major facilitator superfamily member orchestrates a subset of O-glycosylation to aid macrophage tissue invasion
K. Valosková, J. Biebl, M. Roblek, S. Emtenani, A. György, M. Misova, A. Ratheesh, P. Rodrigues, K. Shkarina, I.S.B. Larsen, S.Y. Vakhrushev, H. Clausen, D.E. Siekhaus, ELife 8 (2019) e41801.
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2019 | Conference Paper | IST-REx-ID: 6175   OA
Cost analysis of nondeterministic probabilistic programs
P. Wang, H. Fu, A.K. Goharshady, K. Chatterjee, X. Qin, W. Shi, in:, PLDI 2019: Proceedings of the 40th ACM SIGPLAN Conference on Programming Language Design and Implementation, Association for Computing Machinery, 2019, pp. 204–220.
View | Files available | DOI | arXiv
 

2019 | Journal Article | IST-REx-ID: 5817
Limiting shapes of confined lipid vesicles
B. Kavcic, A. Sakashita, H. Noguchi, P. Ziherl, Soft Matter 15 (2019) 602–614.
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2019 | Thesis | IST-REx-ID: 6473
Estimating information flow in single cells
S.A. Cepeda Humerez, Estimating Information Flow in Single Cells, IST Austria, 2019.
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2019 | Research Data | IST-REx-ID: 6074
Supplementary data for the research paper "Haploinsufficiency of the intellectual disability gene SETD5 disturbs developmental gene expression and cognition"
C. Dotter, G. Novarino, Supplementary Data for the Research Paper “Haploinsufficiency of the Intellectual Disability Gene SETD5 Disturbs Developmental Gene Expression and Cognition,” IST Austria, 2019.
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2019 | Journal Article | IST-REx-ID: 5949   OA
Disrupted-in-schizophrenia 1 overexpression disrupts hippocampal coding and oscillatory synchronization
K. Käfer, H. Malagon-Vina, D. Dickerson, J. O’Neill, S.V. Trossbach, C. Korth, J.L. Csicsvari, Hippocampus 29 (2019) 802–816.
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2019 | Book Chapter | IST-REx-ID: 5793
Studying YAP-mediated 3D morphogenesis using fish embryos and human spheroids
Y. Asaoka, H. Morita, H. Furumoto, C.-P.J. Heisenberg, M. Furutani-Seiki, in:, A. Hergovich (Ed.), The Hippo Pathway, Springer, 2019, pp. 167–181.
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2019 | Journal Article | IST-REx-ID: 5887
Per-session security: Password-based cryptography revisited
G. Demay, P. Gazi, U. Maurer, B. Tackmann, Journal of Computer Security 27 (2019) 75–111.
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2019 | Journal Article | IST-REx-ID: 5907   OA
N-glycans of the microalga Chlorella vulgaris are of the oligomannosidic type but highly methylated
R. Mócsai, R. Figl, C. Troschl, R. Strasser, E. Svehla, M. Windwarder, A. Thader, F. Altmann, Scientific Reports 9 (2019).
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2019 | Journal Article | IST-REx-ID: 5680
Prevalence of legitimate pollinators and nectar robbers and the consequences for fruit set in an Antirrhinum majus hybrid zone
C. Andalo, M. Burrus, S. Paute, C. Lauzeral, D. Field, Botany Letters 166 (2019) 80–92.
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2019 | Journal Article | IST-REx-ID: 6025   OA
Light-activated Frizzled7 reveals a permissive role of non-canonical wnt signaling in mesendoderm cell migration
D. Capek, M. Smutny, A.M. Tichy, M. Morri, H.L. Janovjak, C.-P.J. Heisenberg, ELife 8 (2019).
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2019 | Journal Article | IST-REx-ID: 6049   OA
Feedback-induced self-oscillations in large interacting systems subjected to phase transitions
D. De Martino, Journal of Physics A: Mathematical and Theoretical 52 (2019).
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2019 | Journal Article | IST-REx-ID: 6102   OA
A full vectorial mapping of nanophotonic light fields
B. Le Feber, J.E. Sipe, M. Wulf, L. Kuipers, N. Rotenberg, Light: Science and Applications 8 (2019).
View | Files available | DOI | arXiv
 

2019 | Journal Article | IST-REx-ID: 6087
Lateral inhibition in cell specification mediated by mechanical signals modulating TAZ activity
P. Xia, D.J. Gütl, V. Zheden, C.-P.J. Heisenberg, Cell 176 (2019) 1379–1392.e14.
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2019 | Journal Article | IST-REx-ID: 6190
CCL2 is a vascular permeability factor inducing CCR2-dependent endothelial retraction during lung metastasis
M. Roblek, D. Protsyuk, P.F. Becker, C. Stefanescu, C. Gorzelanny, J.F. Glaus Garzon, L. Knopfova, M. Heikenwalder, B. Luckow, S.W. Schneider, L. Borsig, Molecular Cancer Research 17 (2019) 783–793.
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2019 | Journal Article | IST-REx-ID: 6260   OA
Pinstatic acid promotes auxin transport by inhibiting PIN internalization
A. Oochi, J. Hajny, K. Fukui, Y. Nakao, M.C. Gallei, M. Quareshy, K. Takahashi, T. Kinoshita, S. Harborough, S. Kepinski, H. Kasahara, R. Napier, J. Friml, K. Hayashi, Plant Physiology 180 (2019) 1152–1165.
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2019 | Thesis | IST-REx-ID: 6392
Quantitative investigation of gene expression principles through combinatorial drug perturbation and theory
M. Lukacisin, Quantitative Investigation of Gene Expression Principles through Combinatorial Drug Perturbation and Theory, IST Austria, 2019.
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2019 | Journal Article | IST-REx-ID: 6412   OA
Canonical PRC1 controls sequence-independent propagation of Polycomb-mediated gene silencing
H.F. Moussa, D. Bsteh, R. Yelagandula, C. Pribitzer, K. Stecher, K. Bartalska, L. Michetti, J. Wang, J.A. Zepeda-Martinez, U. Elling, J.I. Stuckey, L.I. James, S.V. Frye, O. Bell, Nature Communications 10 (2019).
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2019 | Journal Article | IST-REx-ID: 6607   OA
SOCS2 is part of a highly prognostic 4-gene signature in AML and promotes disease aggressiveness
C.H. Nguyen, T. Glüxam, A. Schlerka, K. Bauer, A.M. Grandits, H. Hackl, O. Dovey, S. Zöchbauer-Müller, J.L. Cooper, G.S. Vassiliou, D. Stoiber, R. Wieser, G. Heller, Scientific Reports 9 (2019).
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2019 | Journal Article | IST-REx-ID: 6506   OA
Chance and pleiotropy dominate genetic diversity in complex bacterial environments
L. Noda-García, D. Davidi, E. Korenblum, A. Elazar, E. Putintseva, A. Aharoni, D.S. Tawfik, Nature Microbiology 4 (2019) 1221–1230.
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2019 | Journal Article | IST-REx-ID: 6513
Tracing the origin of adult intestinal stem cells
J. Guiu, E.B. Hannezo, S. Yui, S. Demharter, S. Ulyanchenko, M. Maimets, A. Jørgensen, S. Perlman, L. Lundvall, L.S. Mamsen, A. Larsen, R.H. Olesen, C.Y. Andersen, L.L. Thuesen, K.J. Hare, T.H. Pers, K. Khodosevich, B.D. Simons, K.B. Jensen, Nature 570 (2019) 107–111.
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2019 | Journal Article | IST-REx-ID: 6621
On the power to detect rare recombination events
A.E. Wright, I. Darolti, N.I. Bloch, V. Oostra, B.A. Sandkam, S.D. Buechel, N. Kolm, F. Breden, B. Vicoso, J.E. Mank, Proceedings of the National Academy of Sciences of the United States of America 116 (2019) 12607–12608.
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2019 | Journal Article | IST-REx-ID: 6638   OA
Graphs with at most one crossing
A. Silva, A.M. Arroyo Guevara, B. Richter, O. Lee, Discrete Mathematics 342 (2019) 3201–3207.
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2019 | Journal Article | IST-REx-ID: 6657   OA View | Files available | DOI
 

2019 | Journal Article | IST-REx-ID: 6784   OA
Molecular noise of innate immunity shapes bacteria-phage ecologies
J. Ruess, M. Pleska, C.C. Guet, G. Tkačik, PLoS Computational Biology 15 (2019).
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2019 | Journal Article | IST-REx-ID: 6796   OA
Partial coherence and frustration in self-organizing spherical grids
F. Stella, E. Urdapilleta, Y. Luo, A. Treves, Hippocampus (2019).
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2019 | Journal Article | IST-REx-ID: 6710
Sexual dimorphism and rapid turnover in gene expression in pre-reproductive seedlings of a dioecious herb
G. Cossard, M.A. Toups, J. Pannell, Annals of Botany 123 (2019) 1119–1131.
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