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9084 Publications

2019 | Conference Paper | IST-REx-ID: 6490 |

Chatterjee K, Goharshady AK, Goharshady EK. The treewidth of smart contracts. In: Proceedings of the 34th ACM Symposium on Applied Computing. Vol Part F147772. ACM; :400-408. doi:10.1145/3297280.3297322

[Submitted Version] View | Files available | DOI | WoS

2019 | Journal Article | IST-REx-ID: 7158 |

Chatterjee K, Goharshady AK, Goyal P, Ibsen-Jensen R, Pavlogiannis A. Faster algorithms for dynamic algebraic queries in basic RSMs with constant treewidth. ACM Transactions on Programming Languages and Systems. 2019;41(4). doi:10.1145/3363525

[Submitted Version] View | Files available | DOI | WoS

2019 | Journal Article | IST-REx-ID: 7014 |

Chatterjee K, Fu H, Goharshady AK. Non-polynomial worst-case analysis of recursive programs. ACM Transactions on Programming Languages and Systems. 2019;41(4). doi:10.1145/3339984

2019 | Journal Article | IST-REx-ID: 6486 |

Kühnen J, Scarselli D, Hof B. Relaminarization of pipe flow by means of 3D-printed shaped honeycombs. Journal of Fluids Engineering. 2019;141(11). doi:10.1115/1.4043494

2019 | Journal Article | IST-REx-ID: 6228 |

Scarselli D, Kühnen J, Hof B. Relaminarising pipe flow by wall movement. Journal of Fluid Mechanics. 2019;867:934-948. doi:10.1017/jfm.2019.191

2019 | Journal Article | IST-REx-ID: 6260 |

Oochi A, Hajny J, Fukui K, et al. Pinstatic acid promotes auxin transport by inhibiting PIN internalization. Plant Physiology. 2019;180(2):1152-1165. doi:10.1104/pp.19.00201

2019 | Journal Article | IST-REx-ID: 6508 |

Shamipour S, Kardos R, Xue S, Hof B, Hannezo EB, Heisenberg C-PJ. Bulk actin dynamics drive phase segregation in zebrafish oocytes. Cell. 2019;177(6):1463-1479.e18. doi:10.1016/j.cell.2019.04.030

2019 | Journal Article | IST-REx-ID: 7001 |

Schwayer C, Shamipour S, Pranjic-Ferscha K, et al. Mechanosensation of tight junctions depends on ZO-1 phase separation and flow. Cell. 2019;179(4):937-952.e18. doi:10.1016/j.cell.2019.10.006

2019 | Thesis | IST-REx-ID: 6891 |

Kopf A. The implication of cytoskeletal dynamics on leukocyte migration. 2019. doi:10.15479/AT:ISTA:6891

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2019 | Journal Article | IST-REx-ID: 6328 |

Renkawitz J, Kopf A, Stopp JA, et al. Nuclear positioning facilitates amoeboid migration along the path of least resistance. Nature. 2019;568:546-550. doi:10.1038/s41586-019-1087-5

2019 | Journal Article | IST-REx-ID: 6877

Kopf A, Sixt MK. The neural crest pitches in to remove apoptotic debris. Cell. 2019;179(1):51-53. doi:10.1016/j.cell.2019.08.047

2019 | Journal Article | IST-REx-ID: 6830 |

Contreras X, Hippenmeyer S. Memo1 tiles the radial glial cell grid. Neuron. 2019;103(5):750-752. doi:10.1016/j.neuron.2019.08.021

2019 | Journal Article | IST-REx-ID: 6627 |

Adamowski M, Li L, Friml J. Reorientation of cortical microtubule arrays in the hypocotyl of arabidopsis thaliana is induced by the cell growth process and independent of auxin signaling. International Journal of Molecular Sciences. 2019;20(13). doi:10.3390/ijms20133337

2019 | Journal Article | IST-REx-ID: 7117 |

Hafner C, Schumacher C, Knoop E, Auzinger T, Bickel B, Bächer M. X-CAD: Optimizing CAD Models with Extended Finite Elements. ACM Transactions on Graphics. 2019;38(6). doi:10.1145/3355089.3356576

[Submitted Version] View | Files available | DOI | WoS

2019 | Thesis | IST-REx-ID: 6371 |

Igler C. On the nature of gene regulatory design - The biophysics of transcription factor binding shapes gene regulation. 2019. doi:10.15479/AT:ISTA:6371

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2019 | Journal Article | IST-REx-ID: 6189 |

Agrawal N, Choueiri GH, Hof B. Transition to turbulence in particle laden flows. Physical Review Letters. 2019;122(11). doi:10.1103/PhysRevLett.122.114502

2019 | Thesis | IST-REx-ID: 6849 |

Rangel Guerrero DK. The role of CCK-interneurons in regulating hippocampal network dynamics. 2019. doi:10.15479/AT:ISTA:6849

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2019 | Journal Article | IST-REx-ID: 5949 |

Käfer K, Malagon-Vina H, Dickerson D, et al. Disrupted-in-schizophrenia 1 overexpression disrupts hippocampal coding and oscillatory synchronization. Hippocampus. 2019;29(9):802-816. doi:10.1002/hipo.23076

[Published Version] View | Files available | DOI | WoS

2019 | Thesis | IST-REx-ID: 6825 |

Käfer K. The hippocampus and medial prefrontal cortex during flexible behavior. 2019. doi:10.15479/AT:ISTA:6825

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2018 | Journal Article | IST-REx-ID: 10286 |

Allini EN, Skórski M, Petura O, Bernard F, Laban M, Fischer V. Evaluation and monitoring of free running oscillators serving as source of randomness. IACR Transactions on Cryptographic Hardware and Embedded Systems. 2018;2018(3):214-242. doi:10.13154/tches.v2018.i3.214-242

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2018 | Journal Article | IST-REx-ID: 10362

Fisher PDE, Shen Q, Akpinar B, et al. A Programmable DNA origami platform for organizing intrinsically disordered nucleoporins within nanopore confinement. ACS Nano. 2018;12(2):1508-1518. doi:10.1021/acsnano.7b08044

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2018 | Journal Article | IST-REx-ID: 10360

Cohen SIA, Cukalevski R, Michaels TCT, et al. Distinct thermodynamic signatures of oligomer generation in the aggregation of the amyloid-β peptide. Nature Chemistry. 2018;10(5):523-531. doi:10.1038/s41557-018-0023-x

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2018 | Journal Article | IST-REx-ID: 10357

Dear AJ, Šarić A, Michaels TCT, Dobson CM, Knowles TPJ. Statistical mechanics of globular oligomer formation by protein molecules. The Journal of Physical Chemistry B. 2018;122(49):11721-11730. doi:10.1021/acs.jpcb.8b07805

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2018 | Journal Article | IST-REx-ID: 10359 |

Curk T, Wirnsberger P, Dobnikar J, Frenkel D, Šarić A. Controlling cargo trafficking in multicomponent membranes. Nano Letters. 2018;18(9):5350-5356. doi:10.1021/acs.nanolett.8b00786

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2018 | Journal Article | IST-REx-ID: 10358 |

Michaels TCT, Liu LX, Curk S, Bolhuis PG, Šarić A, Knowles TPJ. Reaction rate theory for supramolecular kinetics: application to protein aggregation. Molecular Physics. 2018;116(21-22):3055-3065. doi:10.1080/00268976.2018.1474280

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2018 | Journal Article | IST-REx-ID: 10361

Michaels TCT, Šarić A, Habchi J, et al. Chemical kinetics for bridging molecular mechanisms and macroscopic measurements of amyloid fibril formation. Annual Review of Physical Chemistry. 2018;69(1):273-298. doi:10.1146/annurev-physchem-050317-021322

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2018 | Journal Article | IST-REx-ID: 10626 |

Polshyn H, Zhou H, Spanton EM, Taniguchi T, Watanabe K, Young AF. Quantitative transport measurements of fractional quantum Hall energy gaps in edgeless graphene devices. Physical Review Letters. 2018;121(22). doi:10.1103/physrevlett.121.226801

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2018 | Journal Article | IST-REx-ID: 10627 |

Polshyn H, Naibert TR, Budakian R. Imaging phase slip dynamics in micron-size superconducting rings. Physical Review B. 2018;97(18). doi:10.1103/physrevb.97.184501

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2018 | Conference Paper | IST-REx-ID: 10883 |

Chatterjee K, Dvořák W, Henzinger MH, Svozil A. Quasipolynomial set-based symbolic algorithms for parity games. In: 22nd International Conference on Logic for Programming, Artificial Intelligence and Reasoning. Vol 57. EasyChair; 2018:233-253. doi:10.29007/5z5k

[Published Version] View | Files available | DOI | arXiv

2018 | Journal Article | IST-REx-ID: 1092 |

Mohammadi F, Uhler C, Wang C, Yu J. Generalized permutohedra from probabilistic graphical models. SIAM Journal on Discrete Mathematics. 2018;32(1):64-93. doi:10.1137/16M107894X

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2018 | Conference Paper | IST-REx-ID: 11 |

Leopold NK, Pickl P. Mean-field limits of particles in interaction with quantised radiation fields. In: Vol 270. Springer; 2018:185-214. doi:10.1007/978-3-030-01602-9_9

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2018 | Journal Article | IST-REx-ID: 11063 |

McCloskey A, Ibarra A, Hetzer M. Tpr regulates the total number of nuclear pore complexes per cell nucleus. Genes & Development. 2018;32(19-20):1321-1331. doi:10.1101/gad.315523.118

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2018 | Journal Article | IST-REx-ID: 11064 |

Fleischer JG, Schulte R, Tsai HH, et al. Predicting age from the transcriptome of human dermal fibroblasts. Genome Biology. 2018;19. doi:10.1186/s13059-018-1599-6

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2018 | Journal Article | IST-REx-ID: 11508 |

Matthee JJ, Sobral D, Gronke M, Paulino-Afonso A, Stefanon M, Röttgering H. Confirmation of double peaked Lyα emission at z = 6.593: Witnessing a galaxy directly contributing to the reionisation of the universe. Astronomy & Astrophysics. 2018;619. doi:10.1051/0004-6361/201833528

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2018 | Journal Article | IST-REx-ID: 11549

Khostovan AA, Sobral D, Mobasher B, et al. The clustering of H β + [O III] and [O II] emitters since z ∼ 5: Dependencies with line luminosity and stellar mass. Monthly Notices of the Royal Astronomical Society. 2018;478(3):2999-3015. doi:10.1093/mnras/sty925

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2018 | Journal Article | IST-REx-ID: 11557 |

Sobral D, Matthee JJ, Darvish B, et al. The nature of luminous Ly α emitters at z ∼ 2–3: Maximal dust-poor starbursts and highly ionizing AGN. Monthly Notices of the Royal Astronomical Society. 2018;477(2):2817-2840. doi:10.1093/mnras/sty782

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2018 | Journal Article | IST-REx-ID: 11558 |

Sobral D, Santos S, Matthee JJ, et al. Slicing COSMOS with SC4K: The evolution of typical Ly α emitters and the Ly α escape fraction from z ∼ 2 to 6. Monthly Notices of the Royal Astronomical Society. 2018;476(4):4725-4752. doi:10.1093/mnras/sty378

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2018 | Journal Article | IST-REx-ID: 11555 |

Carniani S, Maiolino R, Amorin R, et al. Kiloparsec-scale gaseous clumps and star formation at z = 5–7. Monthly Notices of the Royal Astronomical Society. 2018;478(1):1170-1184. doi:10.1093/mnras/sty1088

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2018 | Journal Article | IST-REx-ID: 11584 |

Matthee JJ, Schaye J. Star-forming galaxies are predicted to lie on a fundamental plane of mass, star formation rate, and α-enhancement. Monthly Notices of the Royal Astronomical Society: Letters. 2018;479(1):L34-L39. doi:10.1093/mnrasl/sly093

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2018 | Journal Article | IST-REx-ID: 11619 |

Gandolfi D, Barragán O, Livingston JH, Fridlund M, Justesen AB, Redfield S, Fossati L, Mathur S, Grziwa S, Cabrera J, García RA, Persson CM, Van Eylen V, Hatzes AP, Hidalgo D, Albrecht S, Bugnet LA, Cochran WD, Csizmadia S, Deeg H, Eigmüller P, Endl M, Erikson A, Esposito M, Guenther E, Korth J, Luque R, Montañes Rodríguez P, Nespral D, Nowak G, Pätzold M, Prieto-Arranz J. 2018. TESS’s first planet: A super-Earth transiting the naked-eye star π Mensae. Astronomy & Astrophysics. 619, L10.

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2018 | Journal Article | IST-REx-ID: 11618 |

Bugnet LA, García RA, Davies GR, et al. FliPer: A global measure of power density to estimate surface gravities of main-sequence solar-like stars and red giants. Astronomy & Astrophysics. 2018;620. doi:10.1051/0004-6361/201833106

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2018 | Journal Article | IST-REx-ID: 11620 |

Van Eylen V, Dai F, Mathur S, Gandolfi D, Albrecht S, Fridlund M, García RA, Guenther E, Hjorth M, Justesen AB, Livingston J, Lund MN, Pérez Hernández F, Prieto-Arranz J, Regulo C, Bugnet LA, Everett ME, Hirano T, Nespral D, Nowak G, Palle E, Silva Aguirre V, Trifonov T, Winn JN, Barragán O, Beck PG, Chaplin WJ, Cochran WD, Csizmadia S, Deeg H, Endl M, Heeren P, Grziwa S, Hatzes AP, Hidalgo D, Korth J, Mathis S, Montañes Rodriguez P, Narita N, Patzold M, Persson CM, Rodler F, Smith AMS. 2018. HD 89345: A bright oscillating star hosting a transiting warm Saturn-sized planet observed by K2. Monthly Notices of the Royal Astronomical Society. 478(4), 4866–4880.

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2018 | Preprint | IST-REx-ID: 11631 |

Bugnet LA, García RA, Davies GR, Mathur S, Hall OJ, Rendle BM. FliPer: Classifying TESS pulsating stars. arXiv. doi:10.48550/arXiv.1811.12140

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2018 | Journal Article | IST-REx-ID: 11657 |

Henzinger MH, Noe A, Schulz C, Strash D. Practical minimum cut algorithms. ACM Journal of Experimental Algorithmics. 2018;23:1-22. doi:10.1145/3274662

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2018 | Journal Article | IST-REx-ID: 11667 |

Dütting P, Henzinger MH, Starnberger M. Valuation compressions in VCG-based combinatorial auctions. ACM Transactions on Economics and Computation. 2018;6(2). doi:10.1145/3232860

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2018 | Journal Article | IST-REx-ID: 11664 |

Goranci G, Henzinger MH, Thorup M. Incremental exact min-cut in polylogarithmic amortized update time. ACM Transactions on Algorithms. 2018;14(2). doi:10.1145/3174803

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2018 | Journal Article | IST-REx-ID: 11757 |

Bhattacharya S, Henzinger MH, Italiano G. Dynamic algorithms via the primal-dual method. Information and Computation. 2018;261(08):219-239. doi:10.1016/j.ic.2018.02.005

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2018 | Conference Paper | IST-REx-ID: 11828 |

Goranci G, Henzinger MH, Peng P. Dynamic effective resistances and approximate schur complement on separable graphs. In: 26th Annual European Symposium on Algorithms. Vol 112. Schloss Dagstuhl - Leibniz-Zentrum für Informatik; 2018. doi:10.4230/LIPICS.ESA.2018.40

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2018 | Conference Paper | IST-REx-ID: 11827 |

Goranci G, Henzinger MH, Leniowski D. A tree structure for dynamic facility location. In: 26th Annual European Symposium on Algorithms. Vol 112. Schloss Dagstuhl - Leibniz-Zentrum für Informatik; 2018. doi:10.4230/LIPICS.ESA.2018.39

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2018 | Journal Article | IST-REx-ID: 11768 |

Henzinger MH, Krinninger S, Nanongkai D. Decremental single-source shortest paths on undirected graphs in near-linear total update time. Journal of the ACM. 2018;65(6):1-40. doi:10.1145/3218657

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