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6702 Publications


2015 | Research Data Reference | IST-REx-ID: 9712
Tugrul M, Paixao T, Barton NH, Tkačik G. Other fitness models for comparison & for interacting TFBSs. 2015. doi:10.1371/journal.pgen.1005639.s001
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2015 | Research Data Reference | IST-REx-ID: 9714
Gómez Sicilia À, Sikora MK, Cieplak M, Carrión Vázquez M. An exploration of the universe of polyglutamine structures - submission to PLOS journals. 2015. doi:10.1371/journal.pcbi.1004541.s001
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2015 | Research Data Reference | IST-REx-ID: 9715
Trubenova B, Novak S, Hager R. Mathematical inference of the results. 2015. doi:10.1371/journal.pone.0126907.s001
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2015 | Research Data Reference | IST-REx-ID: 9718
Friedlander T, Mayo AE, Tlusty T, Alon U. Supporting information text. 2015. doi:10.1371/journal.pcbi.1004055.s001
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2015 | Journal Article | IST-REx-ID: 1827 | OA
Friedlander T, Mayo A, Tlusty T, Alon U. Evolution of bow-tie architectures in biology. PLoS Computational Biology. 2015;11(3). doi:10.1371/journal.pcbi.1004055
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2015 | Journal Article | IST-REx-ID: 1809 | OA
Trubenova B, Novak S, Hager R. Indirect genetic effects and the dynamics of social interactions. PLoS One. 2015;10(5). doi:10.1371/journal.pone.0126907
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2015 | Research Data Reference | IST-REx-ID: 9772
Trubenova B, Novak S, Hager R. Description of the agent based simulations. 2015. doi:10.1371/journal.pone.0126907.s003
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2015 | Research Data Reference | IST-REx-ID: 9773
Friedlander T, Mayo AE, Tlusty T, Alon U. Evolutionary simulation code. 2015. doi:10.1371/journal.pcbi.1004055.s002
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2015 | Journal Article | IST-REx-ID: 9575 | OA
Krivelevich M, Kwan MA, Sudakov B. Cycles and matchings in randomly perturbed digraphs and hypergraphs. Electronic Notes in Discrete Mathematics. 2015;49:181-187. doi:10.1016/j.endm.2015.06.027
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2015 | Journal Article | IST-REx-ID: 9688 | OA
Cheng B, Tribello GA, Ceriotti M. Solid-liquid interfacial free energy out of equilibrium. Physical Review B - Condensed Matter and Materials Physics. 2015;92(18). doi:10.1103/physrevb.92.180102
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2015 | Journal Article | IST-REx-ID: 1793 | OA
Symonova O, Topp C, Edelsbrunner H. DynamicRoots: A software platform for the reconstruction and analysis of growing plant roots. PLoS One. 2015;10(6). doi:10.1371/journal.pone.0127657
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2015 | Research Data Reference | IST-REx-ID: 9737
Symonova O, Topp C, Edelsbrunner H. Root traits computed by DynamicRoots for the maize root shown in fig 2. 2015. doi:10.1371/journal.pone.0127657.s001
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2015 | Journal Article | IST-REx-ID: 9532 | OA
Rodrigues JA, ZILBERMAN D. Evolution and function of genomic imprinting in plants. Genes and Development. 2015;29(24):2517–2531. doi:10.1101/gad.269902.115
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2015 | Journal Article | IST-REx-ID: 1619 | OA
Chevereau G, Lukacisinova M, Batur T, et al. Quantifying the determinants of evolutionary dynamics leading to drug resistance. PLoS Biology. 2015;13(11). doi:10.1371/journal.pbio.1002299
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2014 | Journal Article | IST-REx-ID: 2261 | OA
Zhu F, Gamboa M, Farruggio A, et al. DICE, an efficient system for iterative genomic editing in human pluripotent stem cells. Nucleic Acids Research. 2014;42(5). doi:10.1093/nar/gkt1290
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2014 | Book Chapter | IST-REx-ID: 2265
Hippenmeyer S. Molecular pathways controlling the sequential steps of cortical projection neuron migration. In: Nguyen L, ed. Cellular and Molecular Control of Neuronal Migration. Vol 800. Springer; 2014:1-24. doi:10.1007/978-94-007-7687-6_1
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2014 | Conference Paper | IST-REx-ID: 2275 | OA
Olsson C, Ulen J, Boykov Y, Kolmogorov V. Partial enumeration and curvature regularization. In: IEEE; 2014:2936-2943. doi:10.1109/ICCV.2013.365
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2014 | Journal Article | IST-REx-ID: 2281 | OA
Guo Y, Seiringer R. On the mass concentration for Bose-Einstein condensates with attractive interactions. Letters in Mathematical Physics. 2014;104(2):141-156. doi:10.1007/s11005-013-0667-9
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2014 | Journal Article | IST-REx-ID: 2285 | OA
Hosp J, Strüber M, Yanagawa Y, et al. Morpho-physiological criteria divide dentate gyrus interneurons into classes. Hippocampus. 2014;23(2):189-203. doi:10.1002/hipo.22214
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2014 | Journal Article | IST-REx-ID: 2407 | OA
Lieb É, Seiringer R. Equivalence of two definitions of the effective mass of a polaron. Journal of Statistical Physics. 2014;154(1-2):51-57. doi:10.1007/s10955-013-0791-z
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2014 | Journal Article | IST-REx-ID: 248 | OA
Browning TD, Matthiesen L, Skorobogatov A. Rational points on pencils of conics and quadrics with many degenerate fibres. Annals of Mathematics. 2014;180(1):381-402. doi:https://doi.org/10.4007/annals.2014.180.1.8
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2014 | Journal Article | IST-REx-ID: 249
Browning TD, Vishe P. Cubic hypersurfaces and a version of the circle method for number fields. Duke Mathematical Journal. 2014;163(10):1825-1883. doi:10.1215/00127094-2738530
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2014 | Journal Article | IST-REx-ID: 252
Browning TD, Jones M. Counting rational points on del Pezzo surfaces with a conic bundle structure. Acta Arithmetica. 2014;163(3):271-298. doi:10.4064/aa163-3-6
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2014 | Journal Article | IST-REx-ID: 254
Browning TD. The polynomial sieve and equal sums of like polynomials. International Mathematics Research Notices. 2014;2015(7):1987-2019. doi:10.1093/imrn/rnt350
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2014 | Journal Article | IST-REx-ID: 255
Browning TD, Dietmann R, Heath Brown R. Rational points on intersections of cubic and quadric hypersurfaces. Journal of the Institute of Mathematics of Jussieu. 2014;14(4):703-749. doi:10.1017/S1474748014000127
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2014 | Journal Article | IST-REx-ID: 2699 | OA
Erdös L, Bourgade P, Yau H. Universality of general β-ensembles. Duke Mathematical Journal. 2014;163(6):1127-1190. doi:10.1215/00127094-2649752
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2014 | Journal Article | IST-REx-ID: 2716 | OA
Chatterjee K, Randour M, Raskin J. Strategy synthesis for multi-dimensional quantitative objectives. Acta Informatica. 2014;51(3-4):129-163. doi:10.1007/s00236-013-0182-6
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2014 | Journal Article | IST-REx-ID: 2852
Fischlin M, Lehmann A, Pietrzak KZ. Robust multi-property combiners for hash functions. Journal of Cryptology. 2014;27(3):397-428. doi:10.1007/s00145-013-9148-7
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2014 | Conference Paper | IST-REx-ID: 2905 | OA
Edelsbrunner H, Morozovy D. Persistent homology: Theory and practice. In: European Mathematical Society Publishing House; 2014:31-50. doi:10.4171/120-1/3
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2014 | Journal Article | IST-REx-ID: 8021 | OA
Araya R, Vogels TP, Yuste R. Activity-dependent dendritic spine neck changes are correlated with synaptic strength. Proceedings of the National Academy of Sciences. 2014;111(28):E2895-E2904. doi:10.1073/pnas.1321869111
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2014 | Journal Article | IST-REx-ID: 8022 | OA
Hennequin G, Vogels TP, Gerstner W. Optimal control of transient dynamics in balanced networks supports generation of complex movements. Neuron. 2014;82(6):1394-1406. doi:10.1016/j.neuron.2014.04.045
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2014 | Journal Article | IST-REx-ID: 8023 | OA
Tomm C, Avermann M, Petersen C, Gerstner W, Vogels TP. Connection-type-specific biases make uniform random network models consistent with cortical recordings. Journal of Neurophysiology. 2014;112(8):1801-1814. doi:10.1152/jn.00629.2013
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2014 | Conference Paper | IST-REx-ID: 8044 | OA
Seiringer R. Structure of the excitation spectrum for many-body quantum systems. In: Proceeding of the International Congress of Mathematicans. Vol 3. Kyung Moon SA; 2014:1175-1194.
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2014 | Journal Article | IST-REx-ID: 809
Bharata T, Menendez L, Hagena W, et al. Cryo electron microscopy of tubular arrays of HIV-1 Gag resolves structures essential for immature virus assembly. PNAS. 2014;111(22):8233-8238. doi:10.1073/pnas.1401455111
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2014 | Journal Article | IST-REx-ID: 8244
Singer J, Singer J, Wang W, et al. Generation of a canine anti-EGFR (ErbB-1) antibody for passive immunotherapy in dog cancer patients. Molecular Cancer Therapeutics. 2014;13(7):1777-1790. doi:10.1158/1535-7163.mct-13-0288
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2014 | Journal Article | IST-REx-ID: 845
Seplyarskiy V, Logacheva M, Penin A, et al. Crossing-over in a hypervariable species preferentially occurs in regions of high local similarity. Molecular Biology and Evolution. 2014;31(11):3016-3025. doi:10.1093/molbev/msu242
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2014 | Journal Article | IST-REx-ID: 8458
Schanda P, Triboulet S, Laguri C, et al. Atomic model of a cell-wall cross-linking enzyme in complex with an intact bacterial peptidoglycan. Journal of the American Chemical Society. 2014;136(51):17852-17860. doi:10.1021/ja5105987
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2014 | Journal Article | IST-REx-ID: 8459
Morin S, Linnet TE, Lescanne M, et al. Relax: The analysis of biomolecular kinetics and thermodynamics using NMR relaxation dispersion data. Bioinformatics. 2014;30(15):2219-2220. doi:10.1093/bioinformatics/btu166
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2014 | Journal Article | IST-REx-ID: 8460
Ma P, Haller JD, Zajakala J, et al. Probing transient conformational states of proteins by solid-state R1ρ relaxation-dispersion NMR spectroscopy. Angewandte Chemie International Edition. 2014;53(17):4312-4317. doi:10.1002/anie.201311275
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2014 | Journal Article | IST-REx-ID: 8500
Kaloshin V, Levi M, Saprykina M. Arnol′d diffusion in a pendulum lattice. Communications on Pure and Applied Mathematics. 2014;67(5):748-775. doi:10.1002/cpa.21509
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2014 | Journal Article | IST-REx-ID: 8501
Bounemoura A, Kaloshin V. Generic fast diffusion for a class of non-convex Hamiltonians with two degrees of freedom. Moscow Mathematical Journal. 2014;14(2):181-203. doi:10.17323/1609-4514-2014-14-2-181-203
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2014 | Journal Article | IST-REx-ID: 852
Rosello O, Kondrashov F. Long-Term asymmetrical acceleration of protein evolution after gene duplication. Genome Biology and Evolution. 2014;6(8):1949-1955. doi:10.1093/gbe/evu159
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2014 | Journal Article | IST-REx-ID: 856
Pougach K, Voet A, Kondrashov F, et al. Duplication of a promiscuous transcription factor drives the emergence of a new regulatory network. Nature Communications. 2014;5. doi:10.1038/ncomms5868
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2014 | Journal Article | IST-REx-ID: 863
Moroz L, Kocot K, Citarella M, Dosung S, Norekian T, Povolotskaya I, Grigorenko A, Dailey C, Berezikov E, Buckley K, Ptitsyn A, Reshetov D, Mukherjee K, Moroz T, Bobkova Y, Yu F, Kapitonov V, Jurka J, Bobkov Y, Swore J, Girardo D, Fodor A, Gusev F, Sanford R, Bruders R, Kittler E, Mills C, Rast J, Derelle R, Solovyev V, Kondrashov F, Swalla B, Sweedler J, Rogaev E, Halanych K, Kohn A. 2014. The ctenophore genome and the evolutionary origins of neural systems. Nature. 510(7503), 109–114.
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2014 | Journal Article | IST-REx-ID: 865
Koval A, Vlasov P, Shichkova P, et al. Anti leprosy drug clofazimine inhibits growth of triple-negative breast cancer cells via inhibition of canonical Wnt signaling. Biochemical Pharmacology. 2014;87(4):571-578. doi:10.1016/j.bcp.2013.12.007
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2014 | Conference Paper | IST-REx-ID: 1702 | OA
Gupta A, Popeea C, Rybalchenko A. Generalised interpolation by solving recursion free-horn clauses. In: Electronic Proceedings in Theoretical Computer Science, EPTCS. Vol 169. Open Publishing; 2014:31-38. doi:10.4204/EPTCS.169.5
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2014 | Conference Paper | IST-REx-ID: 1708
Savin C, Denève S. Spatio-temporal representations of uncertainty in spiking neural networks. In: Vol 3. Neural Information Processing Systems; 2014:2024-2032.
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2014 | Journal Article | IST-REx-ID: 1733 | OA
Cerny P, Chmelik M, Henzinger TA, Radhakrishna A. Interface simulation distances. Theoretical Computer Science. 2014;560(3):348-363. doi:10.1016/j.tcs.2014.08.019
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2014 | Journal Article | IST-REx-ID: 1761 | OA
Mongillo M, Spathis P, Katsaros G, et al. PtSi clustering in silicon probed by transport spectroscopy. Physical Review X. 2014;3(4). doi:10.1103/PhysRevX.3.041025
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2014 | Journal Article | IST-REx-ID: 1791
Baek S, Kerjan G, Bielas S, et al. Off-target effect of doublecortin family shRNA on neuronal migration associated with endogenous MicroRNA dysregulation. Neuron. 2014;82(6):1255-1262. doi:10.1016/j.neuron.2014.04.036
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