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8978 Publications


2019 | Conference Paper | IST-REx-ID: 6490 | OA
The treewidth of smart contracts
K. Chatterjee, A.K. Goharshady, E.K. Goharshady, in:, Proceedings of the 34th ACM Symposium on Applied Computing, ACM, n.d., pp. 400–408.
[Submitted Version] View | Files available | DOI | WoS
 

2019 | Journal Article | IST-REx-ID: 7158 | OA
Faster algorithms for dynamic algebraic queries in basic RSMs with constant treewidth
K. Chatterjee, A.K. Goharshady, P. Goyal, R. Ibsen-Jensen, A. Pavlogiannis, ACM Transactions on Programming Languages and Systems 41 (2019).
[Submitted Version] View | Files available | DOI | WoS
 

2019 | Journal Article | IST-REx-ID: 7014 | OA
Non-polynomial worst-case analysis of recursive programs
K. Chatterjee, H. Fu, A.K. Goharshady, ACM Transactions on Programming Languages and Systems 41 (2019).
[Preprint] View | Files available | DOI | Download Preprint (ext.) | WoS | arXiv
 

2019 | Journal Article | IST-REx-ID: 6486 | OA
Relaminarization of pipe flow by means of 3D-printed shaped honeycombs
J. Kühnen, D. Scarselli, B. Hof, Journal of Fluids Engineering 141 (2019).
[Preprint] View | Files available | DOI | Download Preprint (ext.) | WoS | arXiv
 

2019 | Journal Article | IST-REx-ID: 6228 | OA
Relaminarising pipe flow by wall movement
D. Scarselli, J. Kühnen, B. Hof, Journal of Fluid Mechanics 867 (2019) 934–948.
[Preprint] View | Files available | DOI | Download Preprint (ext.) | WoS | arXiv
 

2019 | Journal Article | IST-REx-ID: 6260 | OA
Pinstatic acid promotes auxin transport by inhibiting PIN internalization
A. Oochi, J. Hajny, K. Fukui, Y. Nakao, M.C. Gallei, M. Quareshy, K. Takahashi, T. Kinoshita, S. Harborough, S. Kepinski, H. Kasahara, R. Napier, J. Friml, K. Hayashi, Plant Physiology 180 (2019) 1152–1165.
[Published Version] View | Files available | DOI | Download Published Version (ext.) | WoS | PubMed | Europe PMC
 

2019 | Journal Article | IST-REx-ID: 6508 | OA
Bulk actin dynamics drive phase segregation in zebrafish oocytes
S. Shamipour, R. Kardos, S. Xue, B. Hof, E.B. Hannezo, C.-P.J. Heisenberg, Cell 177 (2019) 1463–1479.e18.
[Published Version] View | Files available | DOI | Download Published Version (ext.) | WoS | PubMed | Europe PMC
 

2019 | Journal Article | IST-REx-ID: 7001 | OA
Mechanosensation of tight junctions depends on ZO-1 phase separation and flow
C. Schwayer, S. Shamipour, K. Pranjic-Ferscha, A. Schauer, M. Balda, M. Tada, K. Matter, C.-P.J. Heisenberg, Cell 179 (2019) 937–952.e18.
[Submitted Version] View | Files available | DOI | WoS | PubMed | Europe PMC
 

2019 | Thesis | IST-REx-ID: 6891 | OA
The implication of cytoskeletal dynamics on leukocyte migration
A. Kopf, The Implication of Cytoskeletal Dynamics on Leukocyte Migration, Institute of Science and Technology Austria, 2019.
[Published Version] View | Files available | DOI
 

2019 | Journal Article | IST-REx-ID: 6328 | OA
Nuclear positioning facilitates amoeboid migration along the path of least resistance
J. Renkawitz, A. Kopf, J.A. Stopp, I. de Vries, M.K. Driscoll, J. Merrin, R. Hauschild, E.S. Welf, G. Danuser, R. Fiolka, M.K. Sixt, Nature 568 (2019) 546–550.
[Submitted Version] View | Files available | DOI | Download Submitted Version (ext.) | WoS | PubMed | Europe PMC
 

2019 | Journal Article | IST-REx-ID: 6877
The neural crest pitches in to remove apoptotic debris
A. Kopf, M.K. Sixt, Cell 179 (2019) 51–53.
View | Files available | DOI | WoS | PubMed | Europe PMC
 

2019 | Journal Article | IST-REx-ID: 6830 | OA
Memo1 tiles the radial glial cell grid
X. Contreras, S. Hippenmeyer, Neuron 103 (2019) 750–752.
[Published Version] View | Files available | DOI | Download Published Version (ext.) | WoS | PubMed | Europe PMC
 

2019 | Journal Article | IST-REx-ID: 6627 | OA [Published Version] View | Files available | DOI | WoS | PubMed | Europe PMC
 

2019 | Journal Article | IST-REx-ID: 7117 | OA
X-CAD: Optimizing CAD Models with Extended Finite Elements
C. Hafner, C. Schumacher, E. Knoop, T. Auzinger, B. Bickel, M. Bächer, ACM Transactions on Graphics 38 (2019).
[Submitted Version] View | Files available | DOI | WoS
 

2019 | Journal Article | IST-REx-ID: 6189 | OA
Transition to turbulence in particle laden flows
N. Agrawal, G.H. Choueiri, B. Hof, Physical Review Letters 122 (2019).
[Preprint] View | Files available | DOI | Download Preprint (ext.) | WoS | arXiv
 

2019 | Thesis | IST-REx-ID: 6371 | OA
On the nature of gene regulatory design - The biophysics of transcription factor binding shapes gene regulation
C. Igler, On the Nature of Gene Regulatory Design - The Biophysics of Transcription Factor Binding Shapes Gene Regulation, Institute of Science and Technology Austria, 2019.
[Published Version] View | Files available | DOI
 

2018 | Journal Article | IST-REx-ID: 10286 | OA
Evaluation and monitoring of free running oscillators serving as source of randomness
E.N. Allini, M. Skórski, O. Petura, F. Bernard, M. Laban, V. Fischer, IACR Transactions on Cryptographic Hardware and Embedded Systems 2018 (2018) 214–242.
[Published Version] View | Files available | DOI
 

2018 | Journal Article | IST-REx-ID: 10362
A Programmable DNA origami platform for organizing intrinsically disordered nucleoporins within nanopore confinement
P.D.E. Fisher, Q. Shen, B. Akpinar, L.K. Davis, K.K.H. Chung, D. Baddeley, A. Šarić, T.J. Melia, B.W. Hoogenboom, C. Lin, C.P. Lusk, ACS Nano 12 (2018) 1508–1518.
View | DOI | PubMed | Europe PMC
 

2018 | Journal Article | IST-REx-ID: 10360
Distinct thermodynamic signatures of oligomer generation in the aggregation of the amyloid-β peptide
S.I.A. Cohen, R. Cukalevski, T.C.T. Michaels, A. Šarić, M. Törnquist, M. Vendruscolo, C.M. Dobson, A.K. Buell, T.P.J. Knowles, S. Linse, Nature Chemistry 10 (2018) 523–531.
View | DOI | PubMed | Europe PMC
 

2018 | Journal Article | IST-REx-ID: 10357
Statistical mechanics of globular oligomer formation by protein molecules
A.J. Dear, A. Šarić, T.C.T. Michaels, C.M. Dobson, T.P.J. Knowles, The Journal of Physical Chemistry B 122 (2018) 11721–11730.
View | DOI | PubMed | Europe PMC
 

2018 | Journal Article | IST-REx-ID: 10359 | OA
Controlling cargo trafficking in multicomponent membranes
T. Curk, P. Wirnsberger, J. Dobnikar, D. Frenkel, A. Šarić, Nano Letters 18 (2018) 5350–5356.
[Preprint] View | DOI | Download Preprint (ext.) | PubMed | Europe PMC
 

2018 | Journal Article | IST-REx-ID: 10358 | OA
Reaction rate theory for supramolecular kinetics: application to protein aggregation
T.C.T. Michaels, L.X. Liu, S. Curk, P.G. Bolhuis, A. Šarić, T.P.J. Knowles, Molecular Physics 116 (2018) 3055–3065.
[Preprint] View | DOI | Download Preprint (ext.) | arXiv
 

2018 | Journal Article | IST-REx-ID: 10361
Chemical kinetics for bridging molecular mechanisms and macroscopic measurements of amyloid fibril formation
T.C.T. Michaels, A. Šarić, J. Habchi, S. Chia, G. Meisl, M. Vendruscolo, C.M. Dobson, T.P.J. Knowles, Annual Review of Physical Chemistry 69 (2018) 273–298.
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2018 | Journal Article | IST-REx-ID: 10626 | OA
Quantitative transport measurements of fractional quantum Hall energy gaps in edgeless graphene devices
H. Polshyn, H. Zhou, E.M. Spanton, T. Taniguchi, K. Watanabe, A.F. Young, Physical Review Letters 121 (2018).
[Preprint] View | DOI | Download Preprint (ext.) | arXiv
 

2018 | Journal Article | IST-REx-ID: 10627 | OA
Imaging phase slip dynamics in micron-size superconducting rings
H. Polshyn, T.R. Naibert, R. Budakian, Physical Review B 97 (2018).
[Preprint] View | DOI | Download Preprint (ext.) | arXiv
 

2018 | Conference Paper | IST-REx-ID: 10883 | OA
Quasipolynomial set-based symbolic algorithms for parity games
K. Chatterjee, W. Dvořák, M.H. Henzinger, A. Svozil, in:, 22nd International Conference on Logic for Programming, Artificial Intelligence and Reasoning, EasyChair, 2018, pp. 233–253.
[Published Version] View | Files available | DOI | arXiv
 

2018 | Journal Article | IST-REx-ID: 1092 | OA
Generalized permutohedra from probabilistic graphical models
F. Mohammadi, C. Uhler, C. Wang, J. Yu, SIAM Journal on Discrete Mathematics 32 (2018) 64–93.
[Preprint] View | DOI | Download Preprint (ext.)
 

2018 | Conference Paper | IST-REx-ID: 11 | OA
Mean-field limits of particles in interaction with quantised radiation fields
N.K. Leopold, P. Pickl, in:, Springer, 2018, pp. 185–214.
[Preprint] View | DOI | Download Preprint (ext.) | arXiv
 

2018 | Journal Article | IST-REx-ID: 11063 | OA
Tpr regulates the total number of nuclear pore complexes per cell nucleus
A. McCloskey, A. Ibarra, M. Hetzer, Genes & Development 32 (2018) 1321–1331.
[Published Version] View | DOI | Download Published Version (ext.) | PubMed | Europe PMC
 

2018 | Journal Article | IST-REx-ID: 11064 | OA
Predicting age from the transcriptome of human dermal fibroblasts
J.G. Fleischer, R. Schulte, H.H. Tsai, S. Tyagi, A. Ibarra, M.N. Shokhirev, L. Huang, M. Hetzer, S. Navlakha, Genome Biology 19 (2018).
[Published Version] View | DOI | Download Published Version (ext.) | PubMed | Europe PMC
 

2018 | Journal Article | IST-REx-ID: 11508 | OA
Confirmation of double peaked Lyα emission at z = 6.593: Witnessing a galaxy directly contributing to the reionisation of the universe
J.J. Matthee, D. Sobral, M. Gronke, A. Paulino-Afonso, M. Stefanon, H. Röttgering, Astronomy & Astrophysics 619 (2018).
[Published Version] View | DOI | Download Published Version (ext.) | arXiv
 

2018 | Journal Article | IST-REx-ID: 11549
The clustering of H β + [O III] and [O II] emitters since z ∼ 5: Dependencies with line luminosity and stellar mass
A.A. Khostovan, D. Sobral, B. Mobasher, P.N. Best, I. Smail, J.J. Matthee, B. Darvish, H. Nayyeri, S. Hemmati, J.P. Stott, Monthly Notices of the Royal Astronomical Society 478 (2018) 2999–3015.
[Published Version] View | DOI | Download Published Version (ext.) | arXiv
 

2018 | Journal Article | IST-REx-ID: 11557 | OA
The nature of luminous Ly α emitters at z ∼ 2–3: Maximal dust-poor starbursts and highly ionizing AGN
D. Sobral, J.J. Matthee, B. Darvish, I. Smail, P.N. Best, L. Alegre, H. Röttgering, B. Mobasher, A. Paulino-Afonso, A. Stroe, I. Oteo, Monthly Notices of the Royal Astronomical Society 477 (2018) 2817–2840.
[Preprint] View | DOI | Download Preprint (ext.) | arXiv
 

2018 | Journal Article | IST-REx-ID: 11558 | OA
Slicing COSMOS with SC4K: The evolution of typical Ly α emitters and the Ly α escape fraction from z ∼ 2 to 6
D. Sobral, S. Santos, J.J. Matthee, A. Paulino-Afonso, B. Ribeiro, J. Calhau, A.A. Khostovan, Monthly Notices of the Royal Astronomical Society 476 (2018) 4725–4752.
[Preprint] View | DOI | Download Preprint (ext.) | arXiv
 

2018 | Journal Article | IST-REx-ID: 11555 | OA
Kiloparsec-scale gaseous clumps and star formation at z = 5–7
S. Carniani, R. Maiolino, R. Amorin, L. Pentericci, A. Pallottini, A. Ferrara, C.J. Willott, R. Smit, J.J. Matthee, D. Sobral, P. Santini, M. Castellano, S. De Barros, A. Fontana, A. Grazian, L. Guaita, Monthly Notices of the Royal Astronomical Society 478 (2018) 1170–1184.
[Preprint] View | DOI | Download Preprint (ext.) | arXiv
 

2018 | Journal Article | IST-REx-ID: 11584 | OA
Star-forming galaxies are predicted to lie on a fundamental plane of mass, star formation rate, and α-enhancement
J.J. Matthee, J. Schaye, Monthly Notices of the Royal Astronomical Society: Letters 479 (2018) L34–L39.
[Preprint] View | DOI | Download Preprint (ext.) | arXiv
 

2018 | Journal Article | IST-REx-ID: 11619 | OA
TESS’s first planet: A super-Earth transiting the naked-eye star π Mensae
Gandolfi D, Barragán O, Livingston JH, Fridlund M, Justesen AB, Redfield S, Fossati L, Mathur S, Grziwa S, Cabrera J, García RA, Persson CM, Van Eylen V, Hatzes AP, Hidalgo D, Albrecht S, Bugnet LA, Cochran WD, Csizmadia S, Deeg H, Eigmüller P, Endl M, Erikson A, Esposito M, Guenther E, Korth J, Luque R, Montañes Rodríguez P, Nespral D, Nowak G, Pätzold M, Prieto-Arranz J. 2018. TESS’s first planet: A super-Earth transiting the naked-eye star π Mensae. Astronomy & Astrophysics. 619, L10.
[Preprint] View | DOI | Download Preprint (ext.) | arXiv
 

2018 | Journal Article | IST-REx-ID: 11618 | OA
FliPer: A global measure of power density to estimate surface gravities of main-sequence solar-like stars and red giants
L.A. Bugnet, R.A. García, G.R. Davies, S. Mathur, E. Corsaro, O.J. Hall, B.M. Rendle, Astronomy & Astrophysics 620 (2018).
[Preprint] View | DOI | Download Preprint (ext.) | arXiv
 

2018 | Journal Article | IST-REx-ID: 11620 | OA
HD 89345: A bright oscillating star hosting a transiting warm Saturn-sized planet observed by K2
Van Eylen V, Dai F, Mathur S, Gandolfi D, Albrecht S, Fridlund M, García RA, Guenther E, Hjorth M, Justesen AB, Livingston J, Lund MN, Pérez Hernández F, Prieto-Arranz J, Regulo C, Bugnet LA, Everett ME, Hirano T, Nespral D, Nowak G, Palle E, Silva Aguirre V, Trifonov T, Winn JN, Barragán O, Beck PG, Chaplin WJ, Cochran WD, Csizmadia S, Deeg H, Endl M, Heeren P, Grziwa S, Hatzes AP, Hidalgo D, Korth J, Mathis S, Montañes Rodriguez P, Narita N, Patzold M, Persson CM, Rodler F, Smith AMS. 2018. HD 89345: A bright oscillating star hosting a transiting warm Saturn-sized planet observed by K2. Monthly Notices of the Royal Astronomical Society. 478(4), 4866–4880.
[Preprint] View | DOI | Download Preprint (ext.) | arXiv
 

2018 | Preprint | IST-REx-ID: 11631 | OA
FliPer: Classifying TESS pulsating stars
L.A. Bugnet, R.A. García, G.R. Davies, S. Mathur, O.J. Hall, B.M. Rendle, ArXiv (n.d.).
[Preprint] View | DOI | Download Preprint (ext.) | arXiv
 

2018 | Journal Article | IST-REx-ID: 11657 | OA
Practical minimum cut algorithms
M.H. Henzinger, A. Noe, C. Schulz, D. Strash, ACM Journal of Experimental Algorithmics 23 (2018) 1–22.
[Preprint] View | DOI | Download Preprint (ext.) | arXiv
 

2018 | Journal Article | IST-REx-ID: 11667 | OA
Valuation compressions in VCG-based combinatorial auctions
P. Dütting, M.H. Henzinger, M. Starnberger, ACM Transactions on Economics and Computation 6 (2018).
[Preprint] View | DOI | Download Preprint (ext.) | arXiv
 

2018 | Journal Article | IST-REx-ID: 11664 | OA
Incremental exact min-cut in polylogarithmic amortized update time
G. Goranci, M.H. Henzinger, M. Thorup, ACM Transactions on Algorithms 14 (2018).
[Preprint] View | DOI | Download Preprint (ext.) | arXiv
 

2018 | Journal Article | IST-REx-ID: 11757 | OA
Dynamic algorithms via the primal-dual method
S. Bhattacharya, M.H. Henzinger, G. Italiano, Information and Computation 261 (2018) 219–239.
[Published Version] View | DOI | Download Published Version (ext.)
 

2018 | Conference Paper | IST-REx-ID: 11828 | OA
Dynamic effective resistances and approximate schur complement on separable graphs
G. Goranci, M.H. Henzinger, P. Peng, in:, 26th Annual European Symposium on Algorithms, Schloss Dagstuhl - Leibniz-Zentrum für Informatik, 2018.
[Published Version] View | DOI | Download Published Version (ext.) | arXiv
 

2018 | Conference Paper | IST-REx-ID: 11827 | OA
A tree structure for dynamic facility location
G. Goranci, M.H. Henzinger, D. Leniowski, in:, 26th Annual European Symposium on Algorithms, Schloss Dagstuhl - Leibniz-Zentrum für Informatik, 2018.
[Published Version] View | DOI | Download Published Version (ext.) | arXiv
 

2018 | Journal Article | IST-REx-ID: 11768 | OA
Decremental single-source shortest paths on undirected graphs in near-linear total update time
M.H. Henzinger, S. Krinninger, D. Nanongkai, Journal of the ACM 65 (2018) 1–40.
[Preprint] View | Files available | DOI | Download Preprint (ext.) | arXiv
 

2018 | Conference Paper | IST-REx-ID: 11872 | OA
Dynamic algorithms for graph coloring
S. Bhattacharya, D. Chakrabarty, M.H. Henzinger, D. Nanongkai, in:, 29th Annual ACM-SIAM Symposium on Discrete Algorithms, Society for Industrial and Applied Mathematics, 2018, pp. 1–20.
[Preprint] View | DOI | Download Preprint (ext.) | arXiv
 

2018 | Conference Paper | IST-REx-ID: 11882 | OA
Practical minimum cut algorithms
M.H. Henzinger, A. Noe, C. Schulz, D. Strash, in:, 20th Workshop on Algorithm Engineering and Experiments, Society for Industrial and Applied Mathematics, 2018, pp. 48–61.
[Preprint] View | DOI | Download Preprint (ext.) | arXiv
 

2018 | Journal Article | IST-REx-ID: 11890 | OA
Deterministic fully dynamic data structures for vertex cover and matching
S. Bhattacharya, M.H. Henzinger, G.F. Italiano, SIAM Journal on Computing 47 (2018) 859–887.
[Preprint] View | Files available | DOI | Download Preprint (ext.) | arXiv
 

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