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6068 Publications


2015 | Journal Article | IST-REx-ID: 1808
A. Gupta and T. A. Henzinger, “Guest editors’ introduction to special issue on computational methods in systems biology,” ACM Transactions on Modeling and Computer Simulation, vol. 25, no. 2, 2015.
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2015 | Journal Article | IST-REx-ID: 1809 | OA
B. Trubenova, S. Novak, and R. Hager, “Indirect genetic effects and the dynamics of social interactions,” PLoS One, vol. 10, no. 5, 2015.
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2015 | Journal Article | IST-REx-ID: 1810 | OA
M. T. Bollenbach, “Antimicrobial interactions: Mechanisms and implications for drug discovery and resistance evolution,” Current Opinion in Microbiology, vol. 27, pp. 1–9, 2015.
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2015 | Journal Article | IST-REx-ID: 1811 | OA
L. Safari, J. Santos, P. Amaro, K. Jänkälä, and F. Fratini, “Analytical evaluation of atomic form factors: Application to Rayleigh scattering,” Journal of Mathematical Physics, vol. 56, no. 5, 2015.
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2015 | Journal Article | IST-REx-ID: 1812 | OA
M. Lahrz, M. Lemeshko, and L. Mathey, “Exotic roton excitations in quadrupolar Bose–Einstein condensates ,” New Journal of Physics, vol. 17, no. 4, 2015.
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2015 | Journal Article | IST-REx-ID: 1813 | OA
R. Schmidt and M. Lemeshko, “Rotation of quantum impurities in the presence of a many-body environment,” Physical Review Letters, vol. 114, no. 20, 2015.
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2015 | Journal Article | IST-REx-ID: 1814 | OA
S. Jeschke and C. J. Wojtan, “Water wave animation via wavefront parameter interpolation,” ACM Transactions on Graphics, vol. 34, no. 3, 2015.
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2015 | Journal Article | IST-REx-ID: 1817 | OA
S. Porazinski et al., “YAP is essential for tissue tension to ensure vertebrate 3D body shape,” Nature, vol. 521, no. 7551, pp. 217–221, 2015.
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2015 | Journal Article | IST-REx-ID: 1818 | OA
J. Polechova and N. H. Barton, “Limits to adaptation along environmental gradients,” PNAS, vol. 112, no. 20, pp. 6401–6406, 2015.
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2015 | Journal Article | IST-REx-ID: 1819
M. Zwiewka, T. Nodzyński, S. Robert, S. Vanneste, and J. Friml, “Osmotic stress modulates the balance between exocytosis and clathrin mediated endocytosis in Arabidopsis thaliana,” Molecular Plant, vol. 8, no. 8, pp. 1175–1187, 2015.
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2015 | Conference Paper | IST-REx-ID: 1820 | OA
K. Chatterjee, M. Chmelik, R. Gupta, and A. Kanodia, “Optimal cost almost-sure reachability in POMDPs,” in Proceedings of the Twenty-Ninth AAAI Conference on Artificial Intelligence , Austin, TX, USA, 2015, vol. 5, pp. 3496–3502.
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2015 | Journal Article | IST-REx-ID: 1823 | OA
G. Chevereau and M. T. Bollenbach, “Systematic discovery of drug interaction mechanisms,” Molecular Systems Biology, vol. 11, no. 4, 2015.
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2015 | Journal Article | IST-REx-ID: 1824 | OA
J. Knebel, M. Weber, T. H. Krüger, and E. Frey, “Evolutionary games of condensates in coupled birth-death processes,” Nature Communications, vol. 6, 2015.
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2015 | Journal Article | IST-REx-ID: 1827 | OA
T. Friedlander, A. Mayo, T. Tlusty, and U. Alon, “Evolution of bow-tie architectures in biology,” PLoS Computational Biology, vol. 11, no. 3, 2015.
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2015 | Journal Article | IST-REx-ID: 1828 | OA
A. Akopyan, S. Pirogov, and A. Rybko, “Invariant measures of genetic recombination process,” Journal of Statistical Physics, vol. 160, no. 1, pp. 163–167, 2015.
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2015 | Journal Article | IST-REx-ID: 1830 | OA
F. Theis, L. V. Ugelvig, C. Marr, and S. Cremer, “Opposing effects of allogrooming on disease transmission in ant societies,” Philosophical Transactions of the Royal Society of London. Series B, Biological Sciences, vol. 370, no. 1669, 2015.
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2015 | Journal Article | IST-REx-ID: 1831 | OA
P. Kappeler, S. Cremer, and C. Nunn, “Sociality and health: Impacts of sociality on disease susceptibility and transmission in animal and human societies,” Philosophical Transactions of the Royal Society of London. Series B, Biological Sciences, vol. 370, no. 1669, 2015.
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2015 | Journal Article | IST-REx-ID: 1832 | OA
S. Chakraborty, T. A. Henzinger, A. Sezgin, and V. Vafeiadis, “Aspect-oriented linearizability proofs,” Logical Methods in Computer Science, vol. 11, no. 1, 2015.
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2015 | Journal Article | IST-REx-ID: 1834 | OA
C. Chen et al., “Low-dose sevoflurane promoteshippocampal neurogenesis and facilitates the development of dentate gyrus-dependent learning in neonatal rats,” ASN Neuro, vol. 7, no. 2, 2015.
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2015 | Conference Paper | IST-REx-ID: 1835 | OA
M. Giacobbe, C. C. Guet, A. Gupta, T. A. Henzinger, T. Paixao, and T. Petrov, “Model checking gene regulatory networks,” vol. 9035. Springer, pp. 469–483, 2015.
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2015 | Conference Paper | IST-REx-ID: 1836
P. Cerny, T. A. Henzinger, L. Kovács, A. Radhakrishna, and J. Zwirchmayr, “Segment abstraction for worst-case execution time analysis,” vol. 9032. Springer, pp. 105–131, 2015.
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2015 | Journal Article | IST-REx-ID: 1837 | OA
J. Kühnen, P. Braunshier, M. Schwegel, H. Kuhlmann, and B. Hof, “Subcritical versus supercritical transition to turbulence in curved pipes,” Journal of Fluid Mechanics, vol. 770, no. 5, p. R3, 2015.
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2015 | Conference Paper | IST-REx-ID: 1838 | OA
R. Bloem, K. Chatterjee, S. Jacobs, and R. Könighofer, “Assume-guarantee synthesis for concurrent reactive programs with partial information,” presented at the TACAS: Tools and Algorithms for the Construction and Analysis of Systems, London, United Kingdom, 2015, vol. 9035, pp. 517–532.
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2015 | Conference Paper | IST-REx-ID: 1839 | OA
T. Brázdil, K. Chatterjee, V. Forejt, and A. Kučera, “Multigain: A controller synthesis tool for MDPs with multiple mean-payoff objectives,” vol. 9035. Springer, pp. 181–187, 2015.
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2015 | Journal Article | IST-REx-ID: 1840 | OA
B. Geiger, T. Petrov, G. Kubin, and H. Koeppl, “Optimal Kullback-Leibler aggregation via information bottleneck,” IEEE Transactions on Automatic Control, vol. 60, no. 4, pp. 1010–1022, 2015.
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2015 | Journal Article | IST-REx-ID: 1841 | OA
V. Kolmogorov, “A new look at reweighted message passing,” IEEE Transactions on Pattern Analysis and Machine Intelligence, vol. 37, no. 5, pp. 919–930, 2015.
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2015 | Journal Article | IST-REx-ID: 1843
K. Bod’ová, D. Paydarfar, and D. Forger, “Erratum to: Characterizing spiking in noisy type II neurons [J. Theor. Biol. 365 (2015) 40–54],” Journal of Theoretical Biology, vol. 373, 2015.
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2015 | Journal Article | IST-REx-ID: 1845 | OA
D. H. Vandael, C. M. Espinoza Martinez, and P. M. Jonas, “Excitement about inhibitory presynaptic terminals,” Neuron, vol. 85, no. 6, pp. 1149–1151, 2015.
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2015 | Journal Article | IST-REx-ID: 1846 | OA
N. Beneš, J. Kretinsky, K. Larsen, M. Möller, S. Sickert, and J. Srba, “Refinement checking on parametric modal transition systems,” Acta Informatica, vol. 52, no. 2–3, pp. 269–297, 2015.
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2015 | Journal Article | IST-REx-ID: 1847
P. Grones and J. Friml, “ABP1: Finally docking,” Molecular Plant, vol. 8, no. 3, pp. 356–358, 2015.
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2015 | Journal Article | IST-REx-ID: 1848 | OA
B. Schwamb et al., “FAM96A is a novel pro-apoptotic tumor suppressor in gastrointestinal stromal tumors,” International Journal of Cancer, vol. 137, no. 6, pp. 1318–1329, 2015.
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2015 | Journal Article | IST-REx-ID: 1849
E. Himschoot, T. Beeckman, J. Friml, and S. Vanneste, “Calcium is an organizer of cell polarity in plants,” Biochimica et Biophysica Acta - Molecular Cell Research, vol. 1853, no. 9, pp. 2168–2172, 2015.
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2015 | Journal Article | IST-REx-ID: 1850 | OA
S. Novak and S. Cremer, “Fungal disease dynamics in insect societies: Optimal killing rates and the ambivalent effect of high social interaction rates,” Journal of Theoretical Biology, vol. 372, no. 5, pp. 54–64, 2015.
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2015 | Journal Article | IST-REx-ID: 1851 | OA
T. Priklopil, E. Kisdi, and M. Gyllenberg, “Evolutionarily stable mating decisions for sequentially searching females and the stability of reproductive isolation by assortative mating,” Evolution, vol. 69, no. 4, pp. 1015–1026, 2015.
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2015 | Journal Article | IST-REx-ID: 1855 | OA
D. Mcmahon, M. Fürst, J. Caspar, P. Theodorou, M. Brown, and R. Paxton, “A sting in the spit: Widespread cross-infection of multiple RNA viruses across wild and managed bees,” Journal of Animal Ecology, vol. 84, no. 3, pp. 615–624, 2015.
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2015 | Journal Article | IST-REx-ID: 1856 | OA
K. Chatterjee, T. A. Henzinger, B. Jobstmann, and R. Singh, “Measuring and synthesizing systems in probabilistic environments,” Journal of the ACM, vol. 62, no. 1, 2015.
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2015 | Conference Paper | IST-REx-ID: 1857 | OA
A. Pentina, V. Sharmanska, and C. Lampert, “Curriculum learning of multiple tasks,” presented at the CVPR: Computer Vision and Pattern Recognition, Boston, MA, United States, 2015, pp. 5492–5500.
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2015 | Conference Paper | IST-REx-ID: 1858 | OA
C. Lampert, “Predicting the future behavior of a time-varying probability distribution,” presented at the CVPR: Computer Vision and Pattern Recognition, Boston, MA, United States, 2015, pp. 942–950.
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2015 | Conference Paper | IST-REx-ID: 1859 | OA
N. Shah, V. Kolmogorov, and C. Lampert, “A multi-plane block-coordinate Frank-Wolfe algorithm for training structural SVMs with a costly max-oracle,” presented at the CVPR: Computer Vision and Pattern Recognition, Boston, MA, USA, 2015, pp. 2737–2745.
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2015 | Conference Paper | IST-REx-ID: 1860 | OA
A. Royer and C. Lampert, “Classifier adaptation at prediction time,” presented at the CVPR: Computer Vision and Pattern Recognition, Boston, MA, United States, 2015, pp. 1401–1409.
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2015 | Journal Article | IST-REx-ID: 1861
J. Ruess and J. Lygeros, “Moment-based methods for parameter inference and experiment design for stochastic biochemical reaction networks,” ACM Transactions on Modeling and Computer Simulation, vol. 25, no. 2, 2015.
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2015 | Journal Article | IST-REx-ID: 1864 | OA
L. Erdös and A. Knowles, “The Altshuler–Shklovskii formulas for random band matrices II: The general case,” Annales Henri Poincare, vol. 16, no. 3, pp. 709–799, 2015.
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2015 | Journal Article | IST-REx-ID: 1865
H. Robert et al., “Plant embryogenesis requires AUX/LAX-mediated auxin influx,” Development, vol. 142, no. 4, pp. 702–711, 2015.
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2015 | Journal Article | IST-REx-ID: 1866
T. A. Henzinger and J. Raskin, “The equivalence problem for finite automata: Technical perspective,” Communications of the ACM, vol. 58, no. 2, pp. 86–86, 2015.
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2015 | Journal Article | IST-REx-ID: 1867
J. Hühner, Á. Inglés Prieto, C. Neusüß, M. Lämmerhofer, and H. L. Janovjak, “Quantification of riboflavin, flavin mononucleotide, and flavin adenine dinucleotide in mammalian model cells by CE with LED-induced fluorescence detection,” Electrophoresis, vol. 36, no. 4, pp. 518–525, 2015.
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2015 | Journal Article | IST-REx-ID: 1868
Y. Park, Y. Do, S. Altmeyer, Y. Lai, and G. Lee, “Early effect in time-dependent, high-dimensional nonlinear dynamical systems with multiple resonances,” Physical Review E, vol. 91, no. 2, 2015.
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2015 | Journal Article | IST-REx-ID: 1871 | OA
P. Grones and J. Friml, “Auxin transporters and binding proteins at a glance,” Journal of Cell Science, vol. 128, no. 1, pp. 1–7, 2015.
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2015 | Journal Article | IST-REx-ID: 1873 | OA
K. Chatterjee and M. Chmelik, “POMDPs under probabilistic semantics,” Artificial Intelligence, vol. 221, pp. 46–72, 2015.
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2015 | Journal Article | IST-REx-ID: 1874
C. Boccara, L. Kjønigsen, I. Hammer, J. Bjaalie, T. Leergaard, and M. Witter, “A three-plane architectonic atlas of the rat hippocampal region,” Hippocampus, vol. 25, no. 7, pp. 838–857, 2015.
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2015 | Journal Article | IST-REx-ID: 1878
E. Cires Rodriguez and J. Prieto, “Phylogenetic relationships of Petrocoptis A. Braun ex Endl. (Caryophyllaceae), a discussed genus from the Iberian Peninsula,” Journal of Plant Research, vol. 128, no. 2, pp. 223–238, 2015.
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