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7217 Publications
2010 | Conference Paper | IST-REx-ID: 4369 |

D. Nickovic and N. Piterman, “From MTL to deterministic timed automata,” presented at the FORMATS: Formal Modeling and Analysis of Timed Systems, Klosterneuburg, Austria, 2010, vol. 6246, pp. 152–167.
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2010 | Conference Paper | IST-REx-ID: 4378 |

V. Kuncak, R. Piskac, P. Suter, and T. Wies, “Building a calculus of data structures,” presented at the VMCAI: Verification, Model Checking and Abstract Interpretation, Madrid, Spain, 2010, vol. 5944, pp. 26–44.
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2010 | Journal Article | IST-REx-ID: 4379 |

K. Jones, V. Konrad, and D. Nickovic, “Analog property checkers: a DDR2 case study,” Formal Methods in System Design, vol. 36, no. 2. Springer, pp. 114–130, 2010.
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2010 | Conference Paper | IST-REx-ID: 4380 |

T. A. Henzinger, A. Tomar, V. Singh, T. Wies, and D. Zufferey, “A marketplace for cloud resources,” presented at the EMSOFT: Embedded Software , Arizona, USA, 2010, pp. 1–8.
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2010 | Conference Paper | IST-REx-ID: 4381 |

T. A. Henzinger, A. Tomar, V. Singh, T. Wies, and D. Zufferey, “FlexPRICE: Flexible provisioning of resources in a cloud environment,” presented at the CLOUD: Cloud Computing, Miami, USA, 2010, pp. 83–90.
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2010 | Conference Paper | IST-REx-ID: 4382 |

R. Guerraoui, T. A. Henzinger, M. Kapalka, and V. Singh, “Transactions in the jungle,” presented at the SPAA: ACM Symposium on Parallel Algorithms and Architectures, Santorini, Greece, 2010, pp. 263–272.
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2010 | Conference Paper | IST-REx-ID: 4388 |

K. Chatterjee, T. A. Henzinger, B. Jobstmann, and A. Radhakrishna, “GIST: A solver for probabilistic games,” presented at the CAV: Computer Aided Verification, Edinburgh, UK, 2010, vol. 6174, pp. 665–669.
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| arXiv
2010 | Conference Paper | IST-REx-ID: 4389 |

L. Doyen, T. A. Henzinger, A. Legay, and D. Nickovic, “Robustness of sequential circuits,” presented at the ACSD: Application of Concurrency to System Design, 2010, pp. 77–84.
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2010 | Conference Paper | IST-REx-ID: 4390 |

P. Cerny, A. Radhakrishna, D. Zufferey, S. Chaudhuri, and R. Alur, “Model checking of linearizability of concurrent list implementations,” presented at the CAV: Computer Aided Verification, Edinburgh, UK, 2010, vol. 6174, pp. 465–479.
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2010 | Conference Paper | IST-REx-ID: 4393 |

P. Cerny, T. A. Henzinger, and A. Radhakrishna, “Simulation distances,” presented at the CONCUR: Concurrency Theory, Paris, France, 2010, vol. 6269, pp. 235–268.
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2010 | Conference Paper | IST-REx-ID: 4396 |

D. Beyer, T. A. Henzinger, G. Théoduloz, and D. Zufferey, “Shape refinement through explicit heap analysis,” presented at the FASE: Fundamental Approaches To Software Engineering, Paphos, Cyprus, 2010, vol. 6013, pp. 263–277.
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2010 | Conference Paper | IST-REx-ID: 10909
C. Chen and D. Freedman, “Hardness results for homology localization,” in Proceedings of the 2010 Annual ACM-SIAM Symposium on Discrete Algorithms, Austin, TX, United States, 2010, pp. 1594–1604.
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2009 | Journal Article | IST-REx-ID: 2796
A. De Lózar and B. Hof, “An experimental study of the decay of turbulent puffs in pipe flow,” Philosophical Transactions of the Royal Society A Mathematical Physical and Engineering Sciences, vol. 367, no. 1888. Royal Society of London, pp. 589–599, 2009.
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2009 | Journal Article | IST-REx-ID: 3051 |

D. Weijers and J. Friml, “SnapShot: Auxin signaling and transport,” Cell, vol. 136, no. 6. Cell Press, pp. 1172–1172, 2009.
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2009 | Journal Article | IST-REx-ID: 3052 |

S. Vanneste and J. Friml, “Auxin: A trigger for change in plant development,” Cell, vol. 136, no. 6. Cell Press, pp. 1005–1016, 2009.
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2009 | Journal Article | IST-REx-ID: 3054
H. Robert and J. Friml, “Auxin and other signals on the move in plants,” Nature Chemical Biology, vol. 5, no. 5. Nature Publishing Group, pp. 325–332, 2009.
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2009 | Journal Article | IST-REx-ID: 3057 |

J. Petrášek and J. Friml, “Auxin transport routes in plant development,” Development, vol. 136, no. 16. Company of Biologists, pp. 2675–2688, 2009.
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2009 | Journal Article | IST-REx-ID: 3059
J. Kleine Vehn et al., “PIN auxin efflux carrier polarity is regulated by PINOID kinase mediated recruitment into GNOM independent trafficking in arabidopsis,” Plant Cell, vol. 21, no. 12. American Society of Plant Biologists, pp. 3839–3849, 2009.
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2009 | Journal Article | IST-REx-ID: 3061 |

P. Křeček et al., “The PIN-FORMED (PIN) protein family of auxin transporters,” Genome Biology, vol. 10, no. 12. BioMed Central, 2009.
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2009 | Journal Article | IST-REx-ID: 3197 |

M. P. Kumar, V. Kolmogorov, and P. Torr, “An analysis of convex relaxations for MAP estimation of discrete MRFs,” Journal of Machine Learning Research, vol. 10. Microtome Publishing, pp. 71–106, 2009.
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2009 | Conference Paper | IST-REx-ID: 3199
S. Vicente, V. Kolmogorov, and C. Rother, “Joint optimization of segmentation and appearance models,” presented at the ICCV: International Conference on Computer Vision, 2009, pp. 755–762.
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2009 | Conference Paper | IST-REx-ID: 3231
E. Kiltz and K. Z. Pietrzak, “On the security of padding based encryption schemes Why We cannot prove OAEP secure in the standard model,” presented at the EUROCRYPT: Theory and Applications of Cryptographic Techniques, 2009, vol. 5479, pp. 389–406.
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2009 | Journal Article | IST-REx-ID: 3292
J. Engel, P. S. Schmalhorst, T. Dörk Bousset, V. Ferrières, and F. Routier, “A single UDP galactofuranose transporter is required for galactofuranosylation in Aspergillus fumigatus,” Journal of Biological Chemistry, vol. 284, no. 49. American Society for Biochemistry and Molecular Biology, pp. 33859–33868, 2009.
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2009 | Thesis | IST-REx-ID: 3400
P. S. Schmalhorst, “Biosynthesis of Galactofuranose Containing Glycans and Their Relevance for the Pathogenic Fungus Aspergillus fumigatus,” Gottfried Wilhelm Leibniz Universität Hannover, 2009.
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2009 | Journal Article | IST-REx-ID: 8026 |

T. P. Vogels and L. F. Abbott, “Gating multiple signals through detailed balance of excitation and inhibition in spiking networks,” Nature Neuroscience, vol. 12, no. 4. Springer Nature, pp. 483–491, 2009.
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2009 | Journal Article | IST-REx-ID: 8476
J. Farjon, J. Boisbouvier, P. Schanda, A. Pardi, J.-P. Simorre, and B. Brutscher, “Longitudinal-relaxation-enhanced NMR experiments for the study of nucleic acids in solution,” Journal of the American Chemical Society, vol. 131, no. 24. American Chemical Society, pp. 8571–8577, 2009.
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2009 | Journal Article | IST-REx-ID: 8479
M. Gal, T. Kern, P. Schanda, L. Frydman, and B. Brutscher, “An improved ultrafast 2D NMR experiment: Towards atom-resolved real-time studies of protein kinetics at multi-Hz rates,” Journal of Biomolecular NMR, vol. 43. Springer Nature, pp. 1–10, 2009.
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2009 | Conference Paper | IST-REx-ID: 4453 |

T. A. Henzinger, M. Mateescu, and V. Wolf, “Sliding-window abstraction for infinite Markov chains,” presented at the CAV: Computer Aided Verification, 2009, vol. 5643, pp. 337–352.
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2009 | Conference Paper | IST-REx-ID: 4535
F. Didier, T. A. Henzinger, M. Mateescu, and V. Wolf, “Approximation of event probabilities in noisy cellular processes,” presented at the CMSB: Computational Methods in Systems Biology, 2009, vol. 5688, pp. 173–188.
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2009 | Conference Paper | IST-REx-ID: 4540
K. Chatterjee, L. Doyen, and T. A. Henzinger, “Expressiveness and closure properties for quantitative languages,” presented at the LICS: Logic in Computer Science, 2009, pp. 199–208.
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2009 | Conference Paper | IST-REx-ID: 4542 |

K. Chatterjee, L. Doyen, and T. A. Henzinger, “Alternating weighted automata,” presented at the FCT: Fundamentals of Computation Theory, Wroclaw, Poland, 2009, vol. 5699, pp. 3–13.
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2009 | Conference Paper | IST-REx-ID: 4544 |

K. Chatterjee, L. De Alfaro, and T. A. Henzinger, “Termination criteria for solving concurrent safety and reachability games,” presented at the SODA: Symposium on Discrete Algorithms, 2009, pp. 197–206.
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2009 | Conference Paper | IST-REx-ID: 4545 |

K. Chatterjee, L. Doyen, and T. A. Henzinger, “A survey of stochastic games with limsup and liminf objectives,” presented at the ICALP: Automata, Languages and Programming, Rhodos, Greece, 2009, vol. 5556, pp. 1–15.
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2009 | Conference Paper | IST-REx-ID: 4569 |

R. Bloem, K. Chatterjee, T. A. Henzinger, and B. Jobstmann, “Better quality in synthesis through quantitative objectives,” presented at the CAV: Computer Aided Verification, Grenoble, France, 2009, vol. 5643, pp. 140–156.
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| arXiv
2009 | Conference Paper | IST-REx-ID: 4580 |

D. Berwanger, K. Chatterjee, M. De Wulf, L. Doyen, and T. A. Henzinger, “Alpaga: A tool for solving parity games with imperfect information,” presented at the TACAS: Tools and Algorithms for the Construction and Analysis of Systems, 2009, vol. 5505, pp. 58–61.
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2009 | Technical Report | IST-REx-ID: 5392 |

K. Chatterjee, Probabilistic automata on infinite words: Decidability and undecidability results. IST Austria, 2009.
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2009 | Technical Report | IST-REx-ID: 5393 |

K. Chatterjee, T. A. Henzinger, B. Jobstmann, and A. Radhakrishna, Gist: A solver for probabilistic games. IST Austria, 2009.
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2009 | Technical Report | IST-REx-ID: 5394 |

K. Chatterjee, T. A. Henzinger, and F. Horn, Improved lower bounds for request-response and finitary Streett games. IST Austria, 2009.
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2009 | Technical Report | IST-REx-ID: 5395 |

K. Chatterjee, L. Doyen, and T. A. Henzinger, Qualitative analysis of partially-observable Markov decision processes. IST Austria, 2009.
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2009 | Journal Article | IST-REx-ID: 599 |

M. Knuesel, K. Meyer, C. Bernecky, and D. Taatjes, “The human CDK8 subcomplex is a molecular switch that controls Mediator coactivator function,” Genes and Development, vol. 23, no. 4. Cold Spring Harbor Laboratory Press, pp. 439–451, 2009.
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2009 | Journal Article | IST-REx-ID: 7319
M. Reum, S. A. Freunberger, A. Wokaun, and F. N. Büchi, “Measuring the current distribution with sub-millimeter resolution in PEFCs: II. Impact of operating parameters,” Journal of The Electrochemical Society, vol. 156, no. 3. The Electrochemical Society, 2009.
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2009 | Journal Article | IST-REx-ID: 7751
M. R. Robinson, A. J. Wilson, J. G. Pilkington, T. H. Clutton-Brock, J. M. Pemberton, and L. E. B. Kruuk, “The impact of environmental heterogeneity on genetic architecture in a wild population of soay sheep,” Genetics, vol. 181, no. 4. Genetics Society of America, pp. 1639–1648, 2009.
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2009 | Journal Article | IST-REx-ID: 11103 |

M. W. HETZER and S. R. Wente, “Border control at the nucleus: Biogenesis and organization of the nuclear membrane and pore complexes,” Developmental Cell, vol. 17, no. 5. Elsevier, pp. 606–616, 2009.
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2009 | Journal Article | IST-REx-ID: 11105 |

M. Capelson and M. W. HETZER, “The role of nuclear pores in gene regulation, development and disease,” EMBO reports, vol. 10, no. 7. EMBO, pp. 697–705, 2009.
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2009 | Journal Article | IST-REx-ID: 11106 |

D. J. Anderson, J. D. Vargas, J. P. Hsiao, and M. W. HETZER, “Recruitment of functionally distinct membrane proteins to chromatin mediates nuclear envelope formation in vivo,” Journal of Cell Biology, vol. 186, no. 2. Rockefeller University Press, pp. 183–191, 2009.
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2009 | Journal Article | IST-REx-ID: 11107 |

T. R. Dawson, M. D. Lazarus, M. W. HETZER, and S. R. Wente, “ER membrane–bending proteins are necessary for de novo nuclear pore formation,” Journal of Cell Biology, vol. 184, no. 5. Rockefeller University Press, pp. 659–675, 2009.
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2009 | Journal Article | IST-REx-ID: 11108 |

M. A. D’Angelo, M. Raices, S. H. Panowski, and M. W. HETZER, “Age-dependent deterioration of nuclear pore complexes causes a loss of nuclear integrity in postmitotic cells,” Cell, vol. 136, no. 2. Elsevier, pp. 284–295, 2009.
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2009 | Book Chapter | IST-REx-ID: 164 |

T. D. Browning and R. Heath Brown, “Integral points on cubic hypersurfaces,” in Analytic Number Theory: Essays in honour of Klaus Roth, Cambridge University Press, 2009, pp. 75–90.
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| arXiv
2009 | Book Chapter | IST-REx-ID: 168
T. D. Browning and R. Dietmann, “Solubility of Fermat equations,” in Quadratic Forms - algebra, arithmetic and geometry, vol. 493, American Mathematical Society, 2009, pp. 99–106.
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2009 | Journal Article | IST-REx-ID: 1766 |

P. Leek et al., “Using sideband transitions for two-qubit operations in superconducting circuits,” Physical Review B - Condensed Matter and Materials Physics, vol. 79, no. 18. American Physical Society, 2009.
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2009 | Journal Article | IST-REx-ID: 1767 |

M. Baur et al., “Measurement of autler-townes and mollow transitions in a strongly driven superconducting qubit,” Physical Review Letters, vol. 102, no. 24. American Physical Society, 2009.
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2009 | Journal Article | IST-REx-ID: 1768 |

S. Filipp et al., “Two-qubit state tomography using a joint dispersive readout,” Physical Review Letters, vol. 102, no. 20. American Physical Society, 2009.
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2009 | Journal Article | IST-REx-ID: 1769 |

J. M. Fink et al., “Dressed collective qubit states and the Tavis-Cummings model in circuit QED,” Physical Review Letters, vol. 103, no. 8. American Physical Society, 2009.
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2009 | Journal Article | IST-REx-ID: 1770 |

R. Bianchetti et al., “Dynamics of dispersive single-qubit readout in circuit quantum electrodynamics,” Physical Review A - Atomic, Molecular, and Optical Physics, vol. 80, no. 4. American Physical Society, 2009.
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2009 | Journal Article | IST-REx-ID: 1771 |

J. M. Fink et al., “Thermal excitation of multi-photon dressed states in circuit quantum electrodynamics,” Physica Scripta T, vol. T137. IOP Publishing Ltd., 2009.
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2009 | Journal Article | IST-REx-ID: 1825 |

T. Friedlander and N. Brenner, “Adaptive response by state-dependent inactivation,” PNAS, vol. 106, no. 52. National Academy of Sciences, pp. 22558–22563, 2009.
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