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7224 Publications
2010 | Journal Article | IST-REx-ID: 3956
Breaching multiple barriers: leukocyte motility through venular walls and the interstitium
S. Nourshargh, P. Hordijk, M.K. Sixt, Nature Reviews Molecular Cell Biology 11 (2010) 366–378.
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| DOI
S. Nourshargh, P. Hordijk, M.K. Sixt, Nature Reviews Molecular Cell Biology 11 (2010) 366–378.
2010 | Journal Article | IST-REx-ID: 3957
Lifeact mice for studying F-actin dynamics
J. Riedl, K. Flynn, A. Raducanu, F.R. Gärtner, G. Beck, M. Bosl, F. Bradke, S. Massberg, A. Aszodi, M.K. Sixt, R. Wedlich Söldner, Nature Methods 7 (2010) 168–169.
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| DOI
J. Riedl, K. Flynn, A. Raducanu, F.R. Gärtner, G. Beck, M. Bosl, F. Bradke, S. Massberg, A. Aszodi, M.K. Sixt, R. Wedlich Söldner, Nature Methods 7 (2010) 168–169.
2010 | Journal Article | IST-REx-ID: 3958
Extracellular matrix in multiple sclerosis lesions: fibrillar collagens, biglycan and decorin are upregulated and associated with infiltrating immune cells
H. Mohan, M. Krumbholz, R. Sharma, S. Eisele, A. Junker, M.K. Sixt, J. Newcombe, H. Wekerle, R. Hohlfeld, H. Lassmann, E. Meinl, Brain Pathology 20 (2010) 966–975.
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| DOI
H. Mohan, M. Krumbholz, R. Sharma, S. Eisele, A. Junker, M.K. Sixt, J. Newcombe, H. Wekerle, R. Hohlfeld, H. Lassmann, E. Meinl, Brain Pathology 20 (2010) 966–975.
2010 | Journal Article | IST-REx-ID: 3959
Immobilized chemokine fields and soluble chemokine gradients cooperatively shape migration patterns of dendritic cells
K. Schumann, T. Lämmermann, M. Bruckner, D. Legler, J. Polleux, J. Spatz, G. Schuler, R. Förster, M. Lutz, L. Sorokin, M.K. Sixt, Immunity 32 (2010) 703–713.
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K. Schumann, T. Lämmermann, M. Bruckner, D. Legler, J. Polleux, J. Spatz, G. Schuler, R. Förster, M. Lutz, L. Sorokin, M.K. Sixt, Immunity 32 (2010) 703–713.
2010 | Journal Article | IST-REx-ID: 3960 |

MEK signalling tunes actin treadmilling for interstitial lymphocyte migration
M. Weber, M.K. Sixt, EMBO Journal 29 (2010) 2861–2863.
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M. Weber, M.K. Sixt, EMBO Journal 29 (2010) 2861–2863.
2010 | Journal Article | IST-REx-ID: 3961
Mechanisms of force generation and force transmission during interstitial leukocyte migration
J. Renkawitz, M.K. Sixt, EMBO Reports 11 (2010) 744–750.
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J. Renkawitz, M.K. Sixt, EMBO Reports 11 (2010) 744–750.
2010 | Thesis | IST-REx-ID: 3962
Dendritic cell migration across basement membranes in the skin
H. Pflicke, Dendritic Cell Migration across Basement Membranes in the Skin, IST Austria, 2010.
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H. Pflicke, Dendritic Cell Migration across Basement Membranes in the Skin, IST Austria, 2010.
2010 | Journal Article | IST-REx-ID: 3963
Visual discrimination between two sexually deceptive Ophrys species by a bee pollinator
M. Streinzer, T. Ellis, H. Paulus, J. Spaethe, Arthropod-Plant Interactions 4 (2010) 141–148.
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M. Streinzer, T. Ellis, H. Paulus, J. Spaethe, Arthropod-Plant Interactions 4 (2010) 141–148.
2010 | Journal Article | IST-REx-ID: 3964
Lipschitz functions have L_p-stable persistence
D. Cohen Steiner, H. Edelsbrunner, J. Harer, Y. Mileyko, Foundations of Computational Mathematics 10 (2010) 127–139.
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D. Cohen Steiner, H. Edelsbrunner, J. Harer, Y. Mileyko, Foundations of Computational Mathematics 10 (2010) 127–139.
2010 | Journal Article | IST-REx-ID: 4134
Why is adaptation prevented at ecological margins? New insights from individual-based simulations
J. Bridle, J. Polechova, M. Kawata, R. Butlin, Ecology Letters 13 (2010) 485–494.
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J. Bridle, J. Polechova, M. Kawata, R. Butlin, Ecology Letters 13 (2010) 485–494.
2010 | Journal Article | IST-REx-ID: 4157 |

Spatial organization of adhesion: force-dependent regulation and function in tissue morphogenesis
E. Papusheva, C.-P.J. Heisenberg, EMBO Journal 29 (2010) 2753–2768.
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E. Papusheva, C.-P.J. Heisenberg, EMBO Journal 29 (2010) 2753–2768.
2010 | Journal Article | IST-REx-ID: 4163
Planar cell polarity signalling regulates cell adhesion properties in progenitors of the zebrafish laterality organ
P. Oteíza, M. Koeppen, M. Krieg, E. Pulgar, C. Farias, C. Melo, S. Preibisch, D. Mueller, M. Tada, S. Hartel, C.-P.J. Heisenberg, M. Concha, Development 137 (2010) 3459–3468.
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| DOI
P. Oteíza, M. Koeppen, M. Krieg, E. Pulgar, C. Farias, C. Melo, S. Preibisch, D. Mueller, M. Tada, S. Hartel, C.-P.J. Heisenberg, M. Concha, Development 137 (2010) 3459–3468.
2010 | Journal Article | IST-REx-ID: 4187
A role for Rho GTPases and cell-cell adhesion in single-cell motility in vivo
E. Kardash, M. Reichman Fried, J. Maître, B. Boldajipour, E. Papusheva, E. Messerschmidt, C. Heisenberg, E. Raz, Nature Cell Biology 12 (2010) 47–53.
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E. Kardash, M. Reichman Fried, J. Maître, B. Boldajipour, E. Papusheva, E. Messerschmidt, C. Heisenberg, E. Raz, Nature Cell Biology 12 (2010) 47–53.
2010 | Journal Article | IST-REx-ID: 4221
Movement directionality in collective migration of germ layer progenitors
Y. Arboleda Estudillo, M. Krieg, J. Stuehmer, N. Licata, D. Mueller, C.-P.J. Heisenberg, Current Biology 20 (2010) 161–169.
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| DOI
Y. Arboleda Estudillo, M. Krieg, J. Stuehmer, N. Licata, D. Mueller, C.-P.J. Heisenberg, Current Biology 20 (2010) 161–169.
2010 | Journal Article | IST-REx-ID: 4243 |

A new model for evolution in a spatial continuum
N.H. Barton, A. Etheridge, A. Véber, Electronic Journal of Probability 15 (2010) 162–216.
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N.H. Barton, A. Etheridge, A. Véber, Electronic Journal of Probability 15 (2010) 162–216.
2010 | Book Chapter | IST-REx-ID: 4339 |

Ist Bibliothek 2.0 überhaupt noch relevant? – Eine Einleitung in das Handbuch
J. Bergmann, P. Danowski, in:, J. Bergmann, P. Danowski (Eds.), Handbuch Bibliothek 2.0, De Gruyter, 2010, pp. 5–20.
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J. Bergmann, P. Danowski, in:, J. Bergmann, P. Danowski (Eds.), Handbuch Bibliothek 2.0, De Gruyter, 2010, pp. 5–20.
2010 | Other Publication | IST-REx-ID: 4340 |

Open bibliographic data
P. Danowski, Open Bibliographic Data, Elsevier, 2010.
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P. Danowski, Open Bibliographic Data, Elsevier, 2010.
2010 | Conference Paper | IST-REx-ID: 4341
Step one: blow up the silo! - Open bibliographic data, the first step towards Linked Open Data
P. Danowski, in:, IFLA, 2010.
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P. Danowski, in:, IFLA, 2010.
2010 | Book (Editor) | IST-REx-ID: 4346 |

Handbuch Bibliothek 2.0
P. Danowski, J. Bergmann, eds., Handbuch Bibliothek 2.0, De Gruyter, 2010.
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P. Danowski, J. Bergmann, eds., Handbuch Bibliothek 2.0, De Gruyter, 2010.
2010 | Journal Article | IST-REx-ID: 4358
Evolutionary genomics of Staphylococcus aureus reveals insights into the origin and molecular basis of ruminant host adaptation
C. Guinane, N. Ben Zakour, M. Tormo Mas, L. Weinert, B. Lowder, R. Cartwright, D. Smyth, C. Smyth, J. Lindsay, K. Gould, A. Witney, J. Hinds, J.P. Bollback, A. Rambaut, J. Penades, J.R. Fitzgerald, Genome Biology and Evolution 2 (2010) 454–466.
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C. Guinane, N. Ben Zakour, M. Tormo Mas, L. Weinert, B. Lowder, R. Cartwright, D. Smyth, C. Smyth, J. Lindsay, K. Gould, A. Witney, J. Hinds, J.P. Bollback, A. Rambaut, J. Penades, J.R. Fitzgerald, Genome Biology and Evolution 2 (2010) 454–466.
2010 | Conference Paper | IST-REx-ID: 4361 |

Forward analysis of depth-bounded processes
T. Wies, D. Zufferey, T.A. Henzinger, in:, L. Ong (Ed.), Springer, 2010, pp. 94–108.
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T. Wies, D. Zufferey, T.A. Henzinger, in:, L. Ong (Ed.), Springer, 2010, pp. 94–108.
2010 | Conference Paper | IST-REx-ID: 4362
Runtime verification for software transactional memories
V. Singh, in:, O. Sokolsky, G. Rosu, N. Tilmann, H. Barringer, Y. Falcone, B. Finkbeiner, K. Havelund, I. Lee, G. Pace (Eds.), Springer, 2010, pp. 421–435.
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V. Singh, in:, O. Sokolsky, G. Rosu, N. Tilmann, H. Barringer, Y. Falcone, B. Finkbeiner, K. Havelund, I. Lee, G. Pace (Eds.), Springer, 2010, pp. 421–435.
2010 | Conference Paper | IST-REx-ID: 4364
Counterexample-guided focus
A. Podelski, T. Wies, in:, ACM, 2010, pp. 249–260.
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A. Podelski, T. Wies, in:, ACM, 2010, pp. 249–260.
2010 | Conference Paper | IST-REx-ID: 4369 |

From MTL to deterministic timed automata
D. Nickovic, N. Piterman, in:, T.A. Henzinger, K. Chatterjee (Eds.), Springer, 2010, pp. 152–167.
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D. Nickovic, N. Piterman, in:, T.A. Henzinger, K. Chatterjee (Eds.), Springer, 2010, pp. 152–167.
2010 | Conference Paper | IST-REx-ID: 4378 |

Building a calculus of data structures
V. Kuncak, R. Piskac, P. Suter, T. Wies, in:, G. Barthe, M. Hermenegildo (Eds.), Springer, 2010, pp. 26–44.
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V. Kuncak, R. Piskac, P. Suter, T. Wies, in:, G. Barthe, M. Hermenegildo (Eds.), Springer, 2010, pp. 26–44.
2010 | Journal Article | IST-REx-ID: 4379 |

Analog property checkers: a DDR2 case study
K. Jones, V. Konrad, D. Nickovic, Formal Methods in System Design 36 (2010) 114–130.
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K. Jones, V. Konrad, D. Nickovic, Formal Methods in System Design 36 (2010) 114–130.
2010 | Conference Paper | IST-REx-ID: 4380 |

A marketplace for cloud resources
T.A. Henzinger, A. Tomar, V. Singh, T. Wies, D. Zufferey, in:, ACM, 2010, pp. 1–8.
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T.A. Henzinger, A. Tomar, V. Singh, T. Wies, D. Zufferey, in:, ACM, 2010, pp. 1–8.
2010 | Conference Paper | IST-REx-ID: 4381 |

FlexPRICE: Flexible provisioning of resources in a cloud environment
T.A. Henzinger, A. Tomar, V. Singh, T. Wies, D. Zufferey, in:, IEEE, 2010, pp. 83–90.
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T.A. Henzinger, A. Tomar, V. Singh, T. Wies, D. Zufferey, in:, IEEE, 2010, pp. 83–90.
2010 | Conference Paper | IST-REx-ID: 4382 |

Transactions in the jungle
R. Guerraoui, T.A. Henzinger, M. Kapalka, V. Singh, in:, ACM, 2010, pp. 263–272.
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R. Guerraoui, T.A. Henzinger, M. Kapalka, V. Singh, in:, ACM, 2010, pp. 263–272.
2010 | Conference Paper | IST-REx-ID: 4388 |

GIST: A solver for probabilistic games
K. Chatterjee, T.A. Henzinger, B. Jobstmann, A. Radhakrishna, in:, Springer, 2010, pp. 665–669.
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| arXiv
K. Chatterjee, T.A. Henzinger, B. Jobstmann, A. Radhakrishna, in:, Springer, 2010, pp. 665–669.
2010 | Conference Paper | IST-REx-ID: 4389 |

Robustness of sequential circuits
L. Doyen, T.A. Henzinger, A. Legay, D. Nickovic, in:, IEEE, 2010, pp. 77–84.
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L. Doyen, T.A. Henzinger, A. Legay, D. Nickovic, in:, IEEE, 2010, pp. 77–84.
2010 | Conference Paper | IST-REx-ID: 4390 |

Model checking of linearizability of concurrent list implementations
P. Cerny, A. Radhakrishna, D. Zufferey, S. Chaudhuri, R. Alur, in:, Springer, 2010, pp. 465–479.
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P. Cerny, A. Radhakrishna, D. Zufferey, S. Chaudhuri, R. Alur, in:, Springer, 2010, pp. 465–479.
2010 | Book Chapter | IST-REx-ID: 4392
Quantitative Simulation Games
P. Cerny, T.A. Henzinger, A. Radhakrishna, in:, Z. Manna, D. Peled (Eds.), Time For Verification: Essays in Memory of Amir Pnueli, Springer, 2010, pp. 42–60.
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P. Cerny, T.A. Henzinger, A. Radhakrishna, in:, Z. Manna, D. Peled (Eds.), Time For Verification: Essays in Memory of Amir Pnueli, Springer, 2010, pp. 42–60.
2010 | Conference Paper | IST-REx-ID: 4393 |

Simulation distances
P. Cerny, T.A. Henzinger, A. Radhakrishna, in:, Schloss Dagstuhl - Leibniz-Zentrum für Informatik, 2010, pp. 235–268.
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P. Cerny, T.A. Henzinger, A. Radhakrishna, in:, Schloss Dagstuhl - Leibniz-Zentrum für Informatik, 2010, pp. 235–268.
2010 | Conference Paper | IST-REx-ID: 4395
Verifying local transformations on relaxed memory models
S. Burckhardt, M. Musuvathi, V. Singh, in:, R. Gupta (Ed.), Springer, 2010, pp. 104–123.
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S. Burckhardt, M. Musuvathi, V. Singh, in:, R. Gupta (Ed.), Springer, 2010, pp. 104–123.
2010 | Conference Paper | IST-REx-ID: 4396 |

Shape refinement through explicit heap analysis
D. Beyer, T.A. Henzinger, G. Théoduloz, D. Zufferey, in:, D. Rosenblum, G. Taenzer (Eds.), Springer, 2010, pp. 263–277.
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D. Beyer, T.A. Henzinger, G. Théoduloz, D. Zufferey, in:, D. Rosenblum, G. Taenzer (Eds.), Springer, 2010, pp. 263–277.
2010 | Conference Paper | IST-REx-ID: 10909
Hardness results for homology localization
C. Chen, D. Freedman, in:, Proceedings of the 2010 Annual ACM-SIAM Symposium on Discrete Algorithms, Society for Industrial and Applied Mathematics, 2010, pp. 1594–1604.
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C. Chen, D. Freedman, in:, Proceedings of the 2010 Annual ACM-SIAM Symposium on Discrete Algorithms, Society for Industrial and Applied Mathematics, 2010, pp. 1594–1604.
2009 | Journal Article | IST-REx-ID: 2796
An experimental study of the decay of turbulent puffs in pipe flow
A. De Lózar, B. Hof, Philosophical Transactions of the Royal Society A Mathematical Physical and Engineering Sciences 367 (2009) 589–599.
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A. De Lózar, B. Hof, Philosophical Transactions of the Royal Society A Mathematical Physical and Engineering Sciences 367 (2009) 589–599.
2009 | Conference Paper | IST-REx-ID: 2797
Quantitative measurement of the life time of turbulence in pipe flow
D. Kuik, C. Poelma, B. Hof, J. Westerweel, in:, Springer, 2009, pp. 145–148.
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D. Kuik, C. Poelma, B. Hof, J. Westerweel, in:, Springer, 2009, pp. 145–148.
2009 | Journal Article | IST-REx-ID: 2868
Hormone interactions at the root apical meristem
E. Benková, J. Hejátko, Plant Molecular Biology 69 (2009) 383–396.
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E. Benková, J. Hejátko, Plant Molecular Biology 69 (2009) 383–396.
2009 | Journal Article | IST-REx-ID: 2869
Arabidopsis lateral root development: an emerging story
B. Péret, B. De Rybel, I. Casimiro, E. Benková, R. Swarup, L. Laplaze, T. Beeckman, M. Bennett, Trends in Plant Science 14 (2009) 399–408.
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B. Péret, B. De Rybel, I. Casimiro, E. Benková, R. Swarup, L. Laplaze, T. Beeckman, M. Bennett, Trends in Plant Science 14 (2009) 399–408.
2009 | Journal Article | IST-REx-ID: 2932
Blossom V: A new implementation of a minimum cost perfect matching algorithm
V. Kolmogorov, Mathematical Programming Computation 1 (2009) 43–67.
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V. Kolmogorov, Mathematical Programming Computation 1 (2009) 43–67.
2009 | Journal Article | IST-REx-ID: 3046
Parasitic nematodes modulate PIN mediated auxin transport to facilitate infection
W. Grunewald, B. Cannoot, J. Friml, G. Gheysen, PLoS Pathogens 5 (2009).
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W. Grunewald, B. Cannoot, J. Friml, G. Gheysen, PLoS Pathogens 5 (2009).
2009 | Journal Article | IST-REx-ID: 3047
ABCB19 PGP19 stabilises PIN1 in membrane microdomains in Arabidopsis
B. Titapiwatanakun, J. Blakeslee, A. Bandyopadhyay, H. Yang, J. Mravec, M. Sauer, Y. Cheng, J. Adamec, A. Nagashima, M. Geisler, T. Sakai, J. Friml, W. Peer, A. Murphy, Plant Journal 57 (2009) 27–44.
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B. Titapiwatanakun, J. Blakeslee, A. Bandyopadhyay, H. Yang, J. Mravec, M. Sauer, Y. Cheng, J. Adamec, A. Nagashima, M. Geisler, T. Sakai, J. Friml, W. Peer, A. Murphy, Plant Journal 57 (2009) 27–44.
2009 | Journal Article | IST-REx-ID: 3048
Fluorescence imaging based screen identifies ARF GEF component of early endosomal trafficking
H. Tanaka, S. Kitakura, R. De Rycke, R. De Groodt, J. Friml, Current Biology 19 (2009) 391–397.
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| DOI
H. Tanaka, S. Kitakura, R. De Rycke, R. De Groodt, J. Friml, Current Biology 19 (2009) 391–397.
2009 | Journal Article | IST-REx-ID: 3049
Cytokinins modulate auxin induced organogenesis in plants via regulation of the auxin efflux
M. Pernisová, P. Klíma, J. Horák, M. Válková, J. Malbeck, P. Souček, P. Reichman, K. Hoyerová, J. Dubová, J. Friml, E. Zažímalová, J. Hejátko, PNAS 106 (2009) 3609–3614.
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M. Pernisová, P. Klíma, J. Horák, M. Válková, J. Malbeck, P. Souček, P. Reichman, K. Hoyerová, J. Dubová, J. Friml, E. Zažímalová, J. Hejátko, PNAS 106 (2009) 3609–3614.
2009 | Journal Article | IST-REx-ID: 3050
Cytokinin regulates root meristem activity via modulation of the polar auxin transport
K. Růžička, M. Šimášková, J. Duclercq, J. Petrášek, E. Zažímalová, S. Simon, J. Friml, M. Van Montagu, E. Benková, PNAS 106 (2009) 4284–4289.
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K. Růžička, M. Šimášková, J. Duclercq, J. Petrášek, E. Zažímalová, S. Simon, J. Friml, M. Van Montagu, E. Benková, PNAS 106 (2009) 4284–4289.
2009 | Journal Article | IST-REx-ID: 3051 |

SnapShot: Auxin signaling and transport
D. Weijers, J. Friml, Cell 136 (2009) 1172–1172.
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| PubMed | Europe PMC
D. Weijers, J. Friml, Cell 136 (2009) 1172–1172.
2009 | Journal Article | IST-REx-ID: 3052 |

Auxin: A trigger for change in plant development
S. Vanneste, J. Friml, Cell 136 (2009) 1005–1016.
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S. Vanneste, J. Friml, Cell 136 (2009) 1005–1016.
2009 | Journal Article | IST-REx-ID: 3053
A morphogenetic trigger: Is there an emerging concept in plant developmental biology?
E. Benková, M. Ivanchenko, J. Friml, S. Shishkova, J. Dubrovsky, Trends in Plant Science 14 (2009) 189–193.
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E. Benková, M. Ivanchenko, J. Friml, S. Shishkova, J. Dubrovsky, Trends in Plant Science 14 (2009) 189–193.
2009 | Journal Article | IST-REx-ID: 3054
Auxin and other signals on the move in plants
H. Robert, J. Friml, Nature Chemical Biology 5 (2009) 325–332.
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| PubMed | Europe PMC
H. Robert, J. Friml, Nature Chemical Biology 5 (2009) 325–332.
2009 | Journal Article | IST-REx-ID: 3055
Phosphoinositide-dependent regulation of VAN3 ARF-GAP localization and activity essential for vascular tissue continuity in plants
S. Naramoto, S. Sawa, K. Koizumi, T. Uemura, T. Ueda, J. Friml, A. Nakano, H. Fukuda, Development 136 (2009) 1529–1538.
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S. Naramoto, S. Sawa, K. Koizumi, T. Uemura, T. Ueda, J. Friml, A. Nakano, H. Fukuda, Development 136 (2009) 1529–1538.
2009 | Journal Article | IST-REx-ID: 3056
A regulated auxin minimum is required for seed dispersal in Arabidopsis
K. Sorefan, T. Girin, S. Liljegren, K. Ljung, P. Robles, C. Galván Ampudia, R. Offringa, J. Friml, M. Yanofsky, L. Østergaard, Nature 459 (2009) 583–586.
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| DOI
K. Sorefan, T. Girin, S. Liljegren, K. Ljung, P. Robles, C. Galván Ampudia, R. Offringa, J. Friml, M. Yanofsky, L. Østergaard, Nature 459 (2009) 583–586.
2009 | Journal Article | IST-REx-ID: 3057 |

Auxin transport routes in plant development
J. Petrášek, J. Friml, Development 136 (2009) 2675–2688.
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J. Petrášek, J. Friml, Development 136 (2009) 2675–2688.
2009 | Journal Article | IST-REx-ID: 3058
Subcellular homeostasis of phytohormone auxin is mediated by the ER localized PIN5 transporter
J. Mravec, P. Skůpa, A. Bailly, K. Hoyerová, P. Křeček, A. Bielach, J. Petrášek, J. Zhang, V. Gaykova, Y. Stierhof, P. Dobrev, K. Schwarzerová, J. Rolčík, D. Seifertová, C. Luschnig, E. Benková, E. Zažímalová, M. Geisler, J. Friml, Nature 459 (2009) 1136–1140.
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J. Mravec, P. Skůpa, A. Bailly, K. Hoyerová, P. Křeček, A. Bielach, J. Petrášek, J. Zhang, V. Gaykova, Y. Stierhof, P. Dobrev, K. Schwarzerová, J. Rolčík, D. Seifertová, C. Luschnig, E. Benková, E. Zažímalová, M. Geisler, J. Friml, Nature 459 (2009) 1136–1140.
2009 | Journal Article | IST-REx-ID: 3059
PIN auxin efflux carrier polarity is regulated by PINOID kinase mediated recruitment into GNOM independent trafficking in arabidopsis
J. Kleine Vehn, F. Huang, S. Naramoto, J. Zhang, M. Michniewicz, R. Offringa, J. Friml, Plant Cell 21 (2009) 3839–3849.
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J. Kleine Vehn, F. Huang, S. Naramoto, J. Zhang, M. Michniewicz, R. Offringa, J. Friml, Plant Cell 21 (2009) 3839–3849.
2009 | Journal Article | IST-REx-ID: 3060
Cell biology
K. Schumacher, J. Friml, Current Opinion in Plant Biology 12 (2009) 651–652.
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K. Schumacher, J. Friml, Current Opinion in Plant Biology 12 (2009) 651–652.
2009 | Journal Article | IST-REx-ID: 3061 |

The PIN-FORMED (PIN) protein family of auxin transporters
P. Křeček, P. Skůpa, J. Libus, S. Naramoto, R. Tejos, J. Friml, E. Zažímalová, Genome Biology 10 (2009).
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P. Křeček, P. Skůpa, J. Libus, S. Naramoto, R. Tejos, J. Friml, E. Zažímalová, Genome Biology 10 (2009).
2009 | Journal Article | IST-REx-ID: 3197 |

An analysis of convex relaxations for MAP estimation of discrete MRFs
M.P. Kumar, V. Kolmogorov, P. Torr, Journal of Machine Learning Research 10 (2009) 71–106.
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M.P. Kumar, V. Kolmogorov, P. Torr, Journal of Machine Learning Research 10 (2009) 71–106.
2009 | Conference Paper | IST-REx-ID: 3199
Joint optimization of segmentation and appearance models
S. Vicente, V. Kolmogorov, C. Rother, in:, IEEE, 2009, pp. 755–762.
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S. Vicente, V. Kolmogorov, C. Rother, in:, IEEE, 2009, pp. 755–762.
2009 | Journal Article | IST-REx-ID: 3200
New algorithms for convex cost tension problem with application to computer vision
V. Kolmogorov, A. Shioura, Discrete Optimization 6 (2009) 378–393.
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V. Kolmogorov, A. Shioura, Discrete Optimization 6 (2009) 378–393.
2009 | Conference Paper | IST-REx-ID: 3203
A global perspective on MAP inference for low level vision
O. Woodford, C. Rother, V. Kolmogorov, in:, IEEE, 2009, pp. 2319–2326.
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O. Woodford, C. Rother, V. Kolmogorov, in:, IEEE, 2009, pp. 2319–2326.
2009 | Conference Paper | IST-REx-ID: 3230
A new randomness extraction paradigm for hybrid encryption
E. Kiltz, K.Z. Pietrzak, M. Stam, M. Yung, in:, Springer, 2009, pp. 590–609.
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E. Kiltz, K.Z. Pietrzak, M. Stam, M. Yung, in:, Springer, 2009, pp. 590–609.
2009 | Conference Paper | IST-REx-ID: 3231
On the security of padding based encryption schemes Why We cannot prove OAEP secure in the standard model
E. Kiltz, K.Z. Pietrzak, in:, Springer, 2009, pp. 389–406.
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E. Kiltz, K.Z. Pietrzak, in:, Springer, 2009, pp. 389–406.
2009 | Conference Paper | IST-REx-ID: 3232
A leakage resilient mode of operation
K.Z. Pietrzak, in:, Springer, 2009, pp. 462–482.
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K.Z. Pietrzak, in:, Springer, 2009, pp. 462–482.
2009 | Journal Article | IST-REx-ID: 3292
A single UDP galactofuranose transporter is required for galactofuranosylation in Aspergillus fumigatus
J. Engel, P.S. Schmalhorst, T. Dörk Bousset, V. Ferrières, F. Routier, Journal of Biological Chemistry 284 (2009) 33859–33868.
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J. Engel, P.S. Schmalhorst, T. Dörk Bousset, V. Ferrières, F. Routier, Journal of Biological Chemistry 284 (2009) 33859–33868.
2009 | Journal Article | IST-REx-ID: 3293
Sensory correlates of imaginal conditioning in Drosophila melanogaster
S. Chakraborty Tuhin, S. Goswami, O. Siddiqi, Journal of Neurogenetics 23 (2009) 210–9.
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S. Chakraborty Tuhin, S. Goswami, O. Siddiqi, Journal of Neurogenetics 23 (2009) 210–9.
2009 | Journal Article | IST-REx-ID: 3304
The rate at which asexual populations cross fitness valleys
D. Weissman, M. Desai, D. Fisher, M. Feldman, Theoretical Population Biology 75 (2009) 286–300.
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D. Weissman, M. Desai, D. Fisher, M. Feldman, Theoretical Population Biology 75 (2009) 286–300.
2009 | Journal Article | IST-REx-ID: 3309
Mastitis in dairy production: Estimation of sensitivity, specificity and disease prevalence in the absence of a gold standard
C. Uhler, Journal of Agricultural Biological and Environmental Statistics 14 (2009) 79–98.
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C. Uhler, Journal of Agricultural Biological and Environmental Statistics 14 (2009) 79–98.
2009 | Journal Article | IST-REx-ID: 337
Reaction regimes on the synthesis of hollow particles by the Kirkendall effect
A. Cabot, M. Ibáñez, P. Guardia, P. Alivisatos, Journal of the American Chemical Society 131 (2009) 11326–11328.
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A. Cabot, M. Ibáñez, P. Guardia, P. Alivisatos, Journal of the American Chemical Society 131 (2009) 11326–11328.
2009 | Journal Article | IST-REx-ID: 3398
Quiet gene circuit more fragile than its noisy peer
M.T. Bollenbach, R. Kishony, Cell 139 (2009) 460–461.
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M.T. Bollenbach, R. Kishony, Cell 139 (2009) 460–461.
2009 | Thesis | IST-REx-ID: 3400
Biosynthesis of Galactofuranose Containing Glycans and Their Relevance for the Pathogenic Fungus Aspergillus fumigatus
P.S. Schmalhorst, Biosynthesis of Galactofuranose Containing Glycans and Their Relevance for the Pathogenic Fungus Aspergillus Fumigatus, Gottfried Wilhelm Leibniz Universität Hannover, 2009.
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P.S. Schmalhorst, Biosynthesis of Galactofuranose Containing Glycans and Their Relevance for the Pathogenic Fungus Aspergillus Fumigatus, Gottfried Wilhelm Leibniz Universität Hannover, 2009.
2009 | Journal Article | IST-REx-ID: 3408
Periodic forces trigger a complex mechanical response in ubiquitin
P. Szymczak, H.L. Janovjak, Journal of Molecular Biology 390 (2009) 443–456.
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P. Szymczak, H.L. Janovjak, Journal of Molecular Biology 390 (2009) 443–456.
2009 | Journal Article | IST-REx-ID: 8026 |

Gating multiple signals through detailed balance of excitation and inhibition in spiking networks
T.P. Vogels, L.F. Abbott, Nature Neuroscience 12 (2009) 483–491.
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T.P. Vogels, L.F. Abbott, Nature Neuroscience 12 (2009) 483–491.
2009 | Journal Article | IST-REx-ID: 8474
Direct detection of 3hJN' hydrogen-bond scalar couplings in proteins by solid-state NMR spectroscopy
P. Schanda, M. Huber, R. Verel, M. Ernst, B. Meier, Angewandte Chemie International Edition 48 (2009) 9322–9325.
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P. Schanda, M. Huber, R. Verel, M. Ernst, B. Meier, Angewandte Chemie International Edition 48 (2009) 9322–9325.
2009 | Journal Article | IST-REx-ID: 8475
Fast-pulsing longitudinal relaxation optimized techniques: Enriching the toolbox of fast biomolecular NMR spectroscopy
P. Schanda, Progress in Nuclear Magnetic Resonance Spectroscopy 55 (2009) 238–265.
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P. Schanda, Progress in Nuclear Magnetic Resonance Spectroscopy 55 (2009) 238–265.
2009 | Journal Article | IST-REx-ID: 8476
Longitudinal-relaxation-enhanced NMR experiments for the study of nucleic acids in solution
J. Farjon, J. Boisbouvier, P. Schanda, A. Pardi, J.-P. Simorre, B. Brutscher, Journal of the American Chemical Society 131 (2009) 8571–8577.
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J. Farjon, J. Boisbouvier, P. Schanda, A. Pardi, J.-P. Simorre, B. Brutscher, Journal of the American Chemical Society 131 (2009) 8571–8577.
2009 | Journal Article | IST-REx-ID: 8477
Fast two-dimensional NMR spectroscopy of high molecular weight protein assemblies
C. Amero, P. Schanda, M.A. Durá, I. Ayala, D. Marion, B. Franzetti, B. Brutscher, J. Boisbouvier, Journal of the American Chemical Society 131 (2009) 3448–3449.
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C. Amero, P. Schanda, M.A. Durá, I. Ayala, D. Marion, B. Franzetti, B. Brutscher, J. Boisbouvier, Journal of the American Chemical Society 131 (2009) 3448–3449.
2009 | Journal Article | IST-REx-ID: 8478
Direct observation of the dynamic process underlying allosteric signal transmission
S. Brüschweiler, P. Schanda, K. Kloiber, B. Brutscher, G. Kontaxis, R. Konrat, M. Tollinger, Journal of the American Chemical Society 131 (2009) 3063–3068.
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S. Brüschweiler, P. Schanda, K. Kloiber, B. Brutscher, G. Kontaxis, R. Konrat, M. Tollinger, Journal of the American Chemical Society 131 (2009) 3063–3068.
2009 | Journal Article | IST-REx-ID: 8479
An improved ultrafast 2D NMR experiment: Towards atom-resolved real-time studies of protein kinetics at multi-Hz rates
M. Gal, T. Kern, P. Schanda, L. Frydman, B. Brutscher, Journal of Biomolecular NMR 43 (2009) 1–10.
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M. Gal, T. Kern, P. Schanda, L. Frydman, B. Brutscher, Journal of Biomolecular NMR 43 (2009) 1–10.
2009 | Journal Article | IST-REx-ID: 8508
Conservative homoclinic bifurcations and some applications
A. Gorodetski, V. Kaloshin, Proceedings of the Steklov Institute of Mathematics 267 (2009) 76–90.
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A. Gorodetski, V. Kaloshin, Proceedings of the Steklov Institute of Mathematics 267 (2009) 76–90.
2009 | Conference Paper | IST-REx-ID: 4453 |

Sliding-window abstraction for infinite Markov chains
T.A. Henzinger, M. Mateescu, V. Wolf, in:, Springer, 2009, pp. 337–352.
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T.A. Henzinger, M. Mateescu, V. Wolf, in:, Springer, 2009, pp. 337–352.
2009 | Conference Paper | IST-REx-ID: 4535
Approximation of event probabilities in noisy cellular processes
F. Didier, T.A. Henzinger, M. Mateescu, V. Wolf, in:, Springer, 2009, pp. 173–188.
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F. Didier, T.A. Henzinger, M. Mateescu, V. Wolf, in:, Springer, 2009, pp. 173–188.
2009 | Conference Paper | IST-REx-ID: 4540
Expressiveness and closure properties for quantitative languages
K. Chatterjee, L. Doyen, T.A. Henzinger, in:, IEEE, 2009, pp. 199–208.
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K. Chatterjee, L. Doyen, T.A. Henzinger, in:, IEEE, 2009, pp. 199–208.
2009 | Conference Paper | IST-REx-ID: 4542 |

Alternating weighted automata
K. Chatterjee, L. Doyen, T.A. Henzinger, in:, Springer, 2009, pp. 3–13.
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K. Chatterjee, L. Doyen, T.A. Henzinger, in:, Springer, 2009, pp. 3–13.
2009 | Conference Paper | IST-REx-ID: 4543
Stochastic games with finitary objectives
K. Chatterjee, T.A. Henzinger, F. Horn, in:, Springer, 2009, pp. 34–54.
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K. Chatterjee, T.A. Henzinger, F. Horn, in:, Springer, 2009, pp. 34–54.
2009 | Conference Paper | IST-REx-ID: 4544 |

Termination criteria for solving concurrent safety and reachability games
K. Chatterjee, L. De Alfaro, T.A. Henzinger, in:, SIAM, 2009, pp. 197–206.
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K. Chatterjee, L. De Alfaro, T.A. Henzinger, in:, SIAM, 2009, pp. 197–206.
2009 | Conference Paper | IST-REx-ID: 4545 |

A survey of stochastic games with limsup and liminf objectives
K. Chatterjee, L. Doyen, T.A. Henzinger, in:, Springer, 2009, pp. 1–15.
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K. Chatterjee, L. Doyen, T.A. Henzinger, in:, Springer, 2009, pp. 1–15.
2009 | Conference Paper | IST-REx-ID: 4569 |

Better quality in synthesis through quantitative objectives
R. Bloem, K. Chatterjee, T.A. Henzinger, B. Jobstmann, in:, Springer, 2009, pp. 140–156.
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R. Bloem, K. Chatterjee, T.A. Henzinger, B. Jobstmann, in:, Springer, 2009, pp. 140–156.
2009 | Conference Paper | IST-REx-ID: 4580 |

Alpaga: A tool for solving parity games with imperfect information
D. Berwanger, K. Chatterjee, M. De Wulf, L. Doyen, T.A. Henzinger, in:, Springer, 2009, pp. 58–61.
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D. Berwanger, K. Chatterjee, M. De Wulf, L. Doyen, T.A. Henzinger, in:, Springer, 2009, pp. 58–61.
2009 | Technical Report | IST-REx-ID: 5392 |

Probabilistic automata on infinite words: Decidability and undecidability results
K. Chatterjee, Probabilistic Automata on Infinite Words: Decidability and Undecidability Results, IST Austria, 2009.
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K. Chatterjee, Probabilistic Automata on Infinite Words: Decidability and Undecidability Results, IST Austria, 2009.
2009 | Technical Report | IST-REx-ID: 5393 |

Gist: A solver for probabilistic games
K. Chatterjee, T.A. Henzinger, B. Jobstmann, A. Radhakrishna, Gist: A Solver for Probabilistic Games, IST Austria, 2009.
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K. Chatterjee, T.A. Henzinger, B. Jobstmann, A. Radhakrishna, Gist: A Solver for Probabilistic Games, IST Austria, 2009.
2009 | Technical Report | IST-REx-ID: 5394 |

Improved lower bounds for request-response and finitary Streett games
K. Chatterjee, T.A. Henzinger, F. Horn, Improved Lower Bounds for Request-Response and Finitary Streett Games, IST Austria, 2009.
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K. Chatterjee, T.A. Henzinger, F. Horn, Improved Lower Bounds for Request-Response and Finitary Streett Games, IST Austria, 2009.
2009 | Technical Report | IST-REx-ID: 5395 |

Qualitative analysis of partially-observable Markov decision processes
K. Chatterjee, L. Doyen, T.A. Henzinger, Qualitative Analysis of Partially-Observable Markov Decision Processes, IST Austria, 2009.
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K. Chatterjee, L. Doyen, T.A. Henzinger, Qualitative Analysis of Partially-Observable Markov Decision Processes, IST Austria, 2009.
2009 | Journal Article | IST-REx-ID: 599 |

The human CDK8 subcomplex is a molecular switch that controls Mediator coactivator function
M. Knuesel, K. Meyer, C. Bernecky, D. Taatjes, Genes and Development 23 (2009) 439–451.
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M. Knuesel, K. Meyer, C. Bernecky, D. Taatjes, Genes and Development 23 (2009) 439–451.
2009 | Journal Article | IST-REx-ID: 7080
Influence of magnetic fields on structural martensitic transitions
X.-D. Yang, P.S. Riseborough, K.A. Modic, R.A. Fisher, C.P. Opeil, T.R. Finlayson, J.C. Cooley, J.L. Smith, P.A. Goddard, A.V. Silhanek, J.C. Lashley, Philosophical Magazine 89 (2009) 2083–2091.
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X.-D. Yang, P.S. Riseborough, K.A. Modic, R.A. Fisher, C.P. Opeil, T.R. Finlayson, J.C. Cooley, J.L. Smith, P.A. Goddard, A.V. Silhanek, J.C. Lashley, Philosophical Magazine 89 (2009) 2083–2091.
2009 | Journal Article | IST-REx-ID: 7319
Measuring the current distribution with sub-millimeter resolution in PEFCs: II. Impact of operating parameters
M. Reum, S.A. Freunberger, A. Wokaun, F.N. Büchi, Journal of The Electrochemical Society 156 (2009).
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M. Reum, S.A. Freunberger, A. Wokaun, F.N. Büchi, Journal of The Electrochemical Society 156 (2009).
2009 | Conference Paper | IST-REx-ID: 752
Of choices, failures and asynchrony: the many faces of set agreement
D.-A. Alistarh, S. Gilbert, R. Guerraoui, C. Travers, in:, Springer, 2009, pp. 943–953.
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D.-A. Alistarh, S. Gilbert, R. Guerraoui, C. Travers, in:, Springer, 2009, pp. 943–953.
2009 | Journal Article | IST-REx-ID: 7751
The impact of environmental heterogeneity on genetic architecture in a wild population of soay sheep
M.R. Robinson, A.J. Wilson, J.G. Pilkington, T.H. Clutton-Brock, J.M. Pemberton, L.E.B. Kruuk, Genetics 181 (2009) 1639–1648.
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M.R. Robinson, A.J. Wilson, J.G. Pilkington, T.H. Clutton-Brock, J.M. Pemberton, L.E.B. Kruuk, Genetics 181 (2009) 1639–1648.
2009 | Journal Article | IST-REx-ID: 110
Reconnection in three dimensions: The role of spines in three eruptive flares
A. Des Jardins, R. Canfield, D. Longcope, C. Fordyce, S.R. Waitukaitis, The Astrophysical Journal 693 (2009) 1628–1636.
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A. Des Jardins, R. Canfield, D. Longcope, C. Fordyce, S.R. Waitukaitis, The Astrophysical Journal 693 (2009) 1628–1636.