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7224 Publications
2016 | Research Data | IST-REx-ID: 5551 |

Data on pollinator observations and offpsring phenotypes
T. Ellis, (2016).
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T. Ellis, (2016).
2016 | Research Data | IST-REx-ID: 5552 |

Pollinator visitation data for wild Antirrhinum majus plants, with phenotypic and frequency data.
T. Ellis, (2016).
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| DOI
T. Ellis, (2016).
2016 | Research Data | IST-REx-ID: 5553 |

Inference of mating patterns among wild snapdragons in a natural hybrid zone in 2012
D. Field, T. Ellis, (2016).
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D. Field, T. Ellis, (2016).
2016 | Research Data | IST-REx-ID: 5554 |

Experimental Data for Binding Site Evolution of Bacterial RNA Polymerase
M. Tugrul, (2016).
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M. Tugrul, (2016).
2016 | Research Data | IST-REx-ID: 5555 |

Fiji script to determine average speed and direction of migration of cells
R. Hauschild, (2016).
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| DOI
R. Hauschild, (2016).
2016 | Research Data | IST-REx-ID: 5556 |

MATLAB analysis code for 'Sequence-Specific Thermodynamic Properties of Nucleic Acids Influence Both Transcriptional Pausing and Backtracking in Yeast'
M. Lukacisin, M. Landon, R. Jajoo, (2016).
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M. Lukacisin, M. Landon, R. Jajoo, (2016).
2016 | Research Data | IST-REx-ID: 5557 |

Synthetic discrete tomography problems
P. Swoboda, (2016).
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P. Swoboda, (2016).
2016 | Research Data | IST-REx-ID: 5558 |

Tracking, Correcting and Absorbing Water Surface Waves
M. Bojsen-Hansen, (2016).
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| Files available
| DOI
M. Bojsen-Hansen, (2016).
2016 | Journal Article | IST-REx-ID: 5749 |

Adaptation to parasites and costs of parasite resistance in mutator and nonmutator bacteria
S. Wielgoss, T. Bergmiller, A.M. Bischofberger, A.R. Hall, Molecular Biology and Evolution 33 (2016) 770–782.
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| PubMed | Europe PMC
S. Wielgoss, T. Bergmiller, A.M. Bischofberger, A.R. Hall, Molecular Biology and Evolution 33 (2016) 770–782.
2016 | Journal Article | IST-REx-ID: 5771 |

Retrovirus maturation—an extraordinary structural transformation
S. Mattei, F.K. Schur, J.A. Briggs, Current Opinion in Virology 18 (2016) 27–35.
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S. Mattei, F.K. Schur, J.A. Briggs, Current Opinion in Virology 18 (2016) 27–35.
2016 | Book Chapter | IST-REx-ID: 5805
On some local topological properties of naive discrete sphere
N. Sen, R. Biswas, P. Bhowmick, in:, Computational Topology in Image Context, Springer Nature, Cham, 2016, pp. 253–264.
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N. Sen, R. Biswas, P. Bhowmick, in:, Computational Topology in Image Context, Springer Nature, Cham, 2016, pp. 253–264.
2016 | Conference Paper | IST-REx-ID: 5806
On functionality of quadraginta octants of naive sphere with application to circle drawing
R. Biswas, P. Bhowmick, in:, Discrete Geometry for Computer Imagery, Springer Nature, Cham, 2016, pp. 256–267.
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| DOI
R. Biswas, P. Bhowmick, in:, Discrete Geometry for Computer Imagery, Springer Nature, Cham, 2016, pp. 256–267.
2016 | Book Chapter | IST-REx-ID: 5809
On the connectivity and smoothness of discrete spherical circles
R. Biswas, P. Bhowmick, V.E. Brimkov, in:, Combinatorial Image Analysis, Springer Nature, Cham, 2016, pp. 86–100.
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| DOI
R. Biswas, P. Bhowmick, V.E. Brimkov, in:, Combinatorial Image Analysis, Springer Nature, Cham, 2016, pp. 86–100.
2016 | Journal Article | IST-REx-ID: 587 |

Quantum phase magnification
O. Hosten, R. Krishnakumar, N. Engelsen, M. Kasevich, Science 352 (2016) 1552–1555.
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O. Hosten, R. Krishnakumar, N. Engelsen, M. Kasevich, Science 352 (2016) 1552–1555.
2016 | Journal Article | IST-REx-ID: 588
Measurement noise 100 times lower than the quantum-projection limit using entangled atoms
O. Hosten, N. Engelsen, R. Krishnakumar, M. Kasevich, Nature 529 (2016) 505–508.
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O. Hosten, N. Engelsen, R. Krishnakumar, M. Kasevich, Nature 529 (2016) 505–508.
2016 | Conference Paper | IST-REx-ID: 592
Engineering spin squeezed states for quantum-enhanced atom interferometry
N. Engelsen, O. Hosten, R. Krishnakumar, M. Kasevich, in:, IEEE, 2016.
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N. Engelsen, O. Hosten, R. Krishnakumar, M. Kasevich, in:, IEEE, 2016.
2016 | Journal Article | IST-REx-ID: 602
Structure of transcribing mammalian RNA polymerase II
C. Bernecky, F. Herzog, W. Baumeister, J. Plitzko, P. Cramer, Nature 529 (2016) 551–554.
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| DOI
C. Bernecky, F. Herzog, W. Baumeister, J. Plitzko, P. Cramer, Nature 529 (2016) 551–554.
2016 | Journal Article | IST-REx-ID: 7068 |

Magnetic torque anomaly in the quantum limit of Weyl semimetals
P.J.W. Moll, A.C. Potter, N.L. Nair, B.J. Ramshaw, K.A. Modic, S. Riggs, B. Zeng, N.J. Ghimire, E.D. Bauer, R. Kealhofer, F. Ronning, J.G. Analytis, Nature Communications 7 (2016).
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P.J.W. Moll, A.C. Potter, N.L. Nair, B.J. Ramshaw, K.A. Modic, S. Riggs, B. Zeng, N.J. Ghimire, E.D. Bauer, R. Kealhofer, F. Ronning, J.G. Analytis, Nature Communications 7 (2016).
2016 | Journal Article | IST-REx-ID: 7069
Single reconstructed Fermi surface pocket in an underdoped single-layer cuprate superconductor
M.K. Chan, N. Harrison, R.D. McDonald, B.J. Ramshaw, K.A. Modic, N. Barišić, M. Greven, Nature Communications 7 (2016).
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M.K. Chan, N. Harrison, R.D. McDonald, B.J. Ramshaw, K.A. Modic, N. Barišić, M. Greven, Nature Communications 7 (2016).
2016 | Journal Article | IST-REx-ID: 7141
Multipotency of adult hippocampal NSCs in vivo is restricted by Drosha/NFIB
C. Rolando, A. Erni, A. Grison, R.J. Beattie, A. Engler, P.J. Gokhale, M. Milo, T. Wegleiter, S. Jessberger, V. Taylor, Cell Stem Cell 19 (2016) 653–662.
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C. Rolando, A. Erni, A. Grison, R.J. Beattie, A. Engler, P.J. Gokhale, M. Milo, T. Wegleiter, S. Jessberger, V. Taylor, Cell Stem Cell 19 (2016) 653–662.
2016 | Journal Article | IST-REx-ID: 7279 |

Biredox ionic liquids with solid-like redox density in the liquid state for high-energy supercapacitors
E. Mourad, L. Coustan, P. Lannelongue, D. Zigah, A. Mehdi, A. Vioux, S.A. Freunberger, F. Favier, O. Fontaine, Nature Materials 16 (2016) 446–453.
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E. Mourad, L. Coustan, P. Lannelongue, D. Zigah, A. Mehdi, A. Vioux, S.A. Freunberger, F. Favier, O. Fontaine, Nature Materials 16 (2016) 446–453.
2016 | Journal Article | IST-REx-ID: 7293
Proton conducting hollow graphene oxide cylinder as molecular fuel barrier for tubular H2-air fuel cell
R. Thimmappa, M. Chattanahalli Devendrachari, S. Shafi, S.A. Freunberger, M. Ottakam Thotiyl, International Journal of Hydrogen Energy 41 (2016) 22305–22315.
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R. Thimmappa, M. Chattanahalli Devendrachari, S. Shafi, S.A. Freunberger, M. Ottakam Thotiyl, International Journal of Hydrogen Energy 41 (2016) 22305–22315.
2016 | Journal Article | IST-REx-ID: 7294
Lithium insertion properties of mesoporous nanocrystalline TiO2 and TiO2–V2O5 microspheres prepared by non-hydrolytic sol–gel
A.M. Escamilla-Pérez, N. Louvain, M. Kaschowitz, S.A. Freunberger, O. Fontaine, B. Boury, N. Brun, P.H. Mutin, Journal of Sol-Gel Science and Technology 79 (2016) 270–278.
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A.M. Escamilla-Pérez, N. Louvain, M. Kaschowitz, S.A. Freunberger, O. Fontaine, B. Boury, N. Brun, P.H. Mutin, Journal of Sol-Gel Science and Technology 79 (2016) 270–278.
2016 | Journal Article | IST-REx-ID: 7295
Biredox ionic liquids: Electrochemical investigation and impact of ion size on electron transfer
E. Mourad, L. Coustan, S.A. Freunberger, A. Mehdi, A. Vioux, F. Favier, O. Fontaine, Electrochimica Acta 206 (2016) 513–523.
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E. Mourad, L. Coustan, S.A. Freunberger, A. Mehdi, A. Vioux, F. Favier, O. Fontaine, Electrochimica Acta 206 (2016) 513–523.
2016 | Journal Article | IST-REx-ID: 7296
Method for determination of the internal short resistance and heat evolution at different mechanical loads of a Lithium ion battery cell based on dummy pouch cells
T. Volck, W. Sinz, G. Gstrein, C. Breitfuss, S. Heindl, H. Steffan, S.A. Freunberger, M. Wilkening, M. Uitz, C. Fink, A. Geier, Batteries 2 (2016).
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T. Volck, W. Sinz, G. Gstrein, C. Breitfuss, S. Heindl, H. Steffan, S.A. Freunberger, M. Wilkening, M. Uitz, C. Fink, A. Geier, Batteries 2 (2016).
2016 | Journal Article | IST-REx-ID: 7297 |

Batteries: Charging ahead rationally
S.A. Freunberger, Nature Energy 1 (2016).
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S.A. Freunberger, Nature Energy 1 (2016).
2016 | Journal Article | IST-REx-ID: 7298
Evaluating the trade-off between mechanical and electrochemical performance of separators for lithium-ion batteries: Methodology and application
M. Plaimer, C. Breitfuß, W. Sinz, S.F. Heindl, C. Ellersdorfer, H. Steffan, M. Wilkening, V. Hennige, R. Tatschl, A. Geier, C. Schramm, S.A. Freunberger, Journal of Power Sources 306 (2016) 702–710.
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M. Plaimer, C. Breitfuß, W. Sinz, S.F. Heindl, C. Ellersdorfer, H. Steffan, M. Wilkening, V. Hennige, R. Tatschl, A. Geier, C. Schramm, S.A. Freunberger, Journal of Power Sources 306 (2016) 702–710.
2016 | Journal Article | IST-REx-ID: 7599 |

Arabidopsis type II phosphatidylinositol 4-kinase PI4Kγ5 regulates auxin biosynthesis and leaf margin development through interacting with membrane-bound transcription factor ANAC078
Y. Tang, C.-Y. Zhao, S. Tan, H.-W. Xue, PLOS Genetics 12 (2016).
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Y. Tang, C.-Y. Zhao, S. Tan, H.-W. Xue, PLOS Genetics 12 (2016).
2016 | Journal Article | IST-REx-ID: 7734
Exploring boundaries for the genetic consequences of assortative mating for psychiatric traits
W.J. Peyrot, M.R. Robinson, B.W.J.H. Penninx, N.R. Wray, JAMA Psychiatry 73 (2016) 1189–1195.
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W.J. Peyrot, M.R. Robinson, B.W.J.H. Penninx, N.R. Wray, JAMA Psychiatry 73 (2016) 1189–1195.
2016 | Journal Article | IST-REx-ID: 7736
EigenGWAS: Finding loci under selection through genome-wide association studies of eigenvectors in structured populations
G.-B. Chen, S.H. Lee, Z.-X. Zhu, B. Benyamin, M.R. Robinson, Heredity 117 (2016) 51–61.
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G.-B. Chen, S.H. Lee, Z.-X. Zhu, B. Benyamin, M.R. Robinson, Heredity 117 (2016) 51–61.
2016 | Journal Article | IST-REx-ID: 7737 |

Integration of summary data from GWAS and eQTL studies predicts complex trait gene targets
Z. Zhu, F. Zhang, H. Hu, A. Bakshi, M.R. Robinson, J.E. Powell, G.W. Montgomery, M.E. Goddard, N.R. Wray, P.M. Visscher, J. Yang, Nature Genetics 48 (2016) 481–487.
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Z. Zhu, F. Zhang, H. Hu, A. Bakshi, M.R. Robinson, J.E. Powell, G.W. Montgomery, M.E. Goddard, N.R. Wray, P.M. Visscher, J. Yang, Nature Genetics 48 (2016) 481–487.
2016 | Journal Article | IST-REx-ID: 7760
Scaling ansatz for the jamming transition
C.P. Goodrich, A.J. Liu, J.P. Sethna, Proceedings of the National Academy of Sciences 113 (2016) 9745–9750.
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C.P. Goodrich, A.J. Liu, J.P. Sethna, Proceedings of the National Academy of Sciences 113 (2016) 9745–9750.
2016 | Journal Article | IST-REx-ID: 7761
Pinning susceptibility: The effect of dilute, quenched disorder on jamming
A.L. Graves, S. Nashed, E. Padgett, C.P. Goodrich, A.J. Liu, J.P. Sethna, Physical Review Letters 116 (2016).
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A.L. Graves, S. Nashed, E. Padgett, C.P. Goodrich, A.J. Liu, J.P. Sethna, Physical Review Letters 116 (2016).
2016 | Journal Article | IST-REx-ID: 7762
Divergence of Voronoi cell anisotropy vector: A threshold-free characterization of local structure in amorphous materials
J.M. Rieser, C.P. Goodrich, A.J. Liu, D.J. Durian, Physical Review Letters 116 (2016).
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J.M. Rieser, C.P. Goodrich, A.J. Liu, D.J. Durian, Physical Review Letters 116 (2016).
2016 | Journal Article | IST-REx-ID: 7763
Higher-order wavelet reconstruction/differentiation filters and Gibbs phenomena
R. Lombardini, R. Acevedo, A. Kuczala, K.P. Keys, C.P. Goodrich, B.R. Johnson, Journal of Computational Physics 305 (2016) 244–262.
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R. Lombardini, R. Acevedo, A. Kuczala, K.P. Keys, C.P. Goodrich, B.R. Johnson, Journal of Computational Physics 305 (2016) 244–262.
2016 | Journal Article | IST-REx-ID: 7764
Spatial structure of states of self stress in jammed systems
D.M. Sussman, C.P. Goodrich, A.J. Liu, Soft Matter 12 (2016) 3982–3990.
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D.M. Sussman, C.P. Goodrich, A.J. Liu, Soft Matter 12 (2016) 3982–3990.
2016 | Journal Article | IST-REx-ID: 1057
Coordinate-targeted fluorescence nanoscopy with multiple off states
J.G. Danzl, S. Sidenstein, C. Gregor, N. Urban, P. Ilgen, S. Jakobs, S. Hell, Nature Photonics 10 (2016) 122–128.
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J.G. Danzl, S. Sidenstein, C. Gregor, N. Urban, P. Ilgen, S. Jakobs, S. Hell, Nature Photonics 10 (2016) 122–128.
2016 | Journal Article | IST-REx-ID: 1059
Fluorescent rhodamines and fluorogenic carbopyronines for super-resolution STED microscopy in living cells
A. Butkevich, G. Mitronova, S. Sidenstein, J. Klocke, D. Kamin, D. Meineke, E. D’Este, P. Kraemer, J.G. Danzl, V. Belov, S. Hell, Angewandte Chemie - International Edition 55 (2016) 3290–3294.
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A. Butkevich, G. Mitronova, S. Sidenstein, J. Klocke, D. Kamin, D. Meineke, E. D’Este, P. Kraemer, J.G. Danzl, V. Belov, S. Hell, Angewandte Chemie - International Edition 55 (2016) 3290–3294.
2016 | Journal Article | IST-REx-ID: 1060
Multicolour multilevel STED nanoscopy of actin/spectrin organization at synapses
S. Sidenstein, E. D’Este, M. Böhm, J.G. Danzl, V. Belov, S. Hell, Scientific Reports 6 (2016) 1–8.
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| DOI
S. Sidenstein, E. D’Este, M. Böhm, J.G. Danzl, V. Belov, S. Hell, Scientific Reports 6 (2016) 1–8.
2016 | Conference Paper | IST-REx-ID: 1068 |

Conditionally optimal algorithms for generalized Büchi Games
K. Chatterjee, W. Dvorák, M. Henzinger, V. Loitzenbauer, in:, Schloss Dagstuhl - Leibniz-Zentrum für Informatik, 2016.
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K. Chatterjee, W. Dvorák, M. Henzinger, V. Loitzenbauer, in:, Schloss Dagstuhl - Leibniz-Zentrum für Informatik, 2016.
2016 | Conference Paper | IST-REx-ID: 1069 |

On the skolem problem for continuous linear dynamical systems
V.K. Chonev, J. Ouaknine, J. Worrell, in:, Schloss Dagstuhl- Leibniz-Zentrum fur Informatik, 2016.
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V.K. Chonev, J. Ouaknine, J. Worrell, in:, Schloss Dagstuhl- Leibniz-Zentrum fur Informatik, 2016.
2016 | Conference Paper | IST-REx-ID: 1070 |

Computation tree logic for synchronization properties
K. Chatterjee, L. Doyen, in:, Schloss Dagstuhl- Leibniz-Zentrum fur Informatik, 2016.
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K. Chatterjee, L. Doyen, in:, Schloss Dagstuhl- Leibniz-Zentrum fur Informatik, 2016.
2016 | Conference Paper | IST-REx-ID: 1071 |

Optimal reachability and a space time tradeoff for distance queries in constant treewidth graphs
K. Chatterjee, R. Ibsen-Jensen, A. Pavlogiannis, in:, Schloss Dagstuhl- Leibniz-Zentrum fur Informatik, 2016.
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K. Chatterjee, R. Ibsen-Jensen, A. Pavlogiannis, in:, Schloss Dagstuhl- Leibniz-Zentrum fur Informatik, 2016.
2016 | Conference Paper | IST-REx-ID: 10746 |

Study of vortex states and dynamics in mesoscopic superconducting samples with MFM
H. Polshyn, T. Naibert, V. Chua, R. Budakian, in:, APS March Meeting 2016, American Physical Society, 2016.
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H. Polshyn, T. Naibert, V. Chua, R. Budakian, in:, APS March Meeting 2016, American Physical Society, 2016.
2016 | Conference Paper | IST-REx-ID: 10747 |

Stochastic resonance magnetic force microscopy imaging of Josephson arrays
T. Naibert, H. Polshyn, B. Wolin, M. Durkin, R. Garrido Menacho, I.M. Shem, V. Chua, T. Hughes, N. Mason, R. Budakian, in:, APS March Meeting 2016, American Physical Society, 2016.
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T. Naibert, H. Polshyn, B. Wolin, M. Durkin, R. Garrido Menacho, I.M. Shem, V. Chua, T. Hughes, N. Mason, R. Budakian, in:, APS March Meeting 2016, American Physical Society, 2016.
2016 | Journal Article | IST-REx-ID: 1081 |

Cellular mechanisms for cargo delivery and polarity maintenance at different polar domains in plant cells
Ł. Łangowski, K.T. Wabnik, H. Li, S. Vanneste, S. Naramoto, H. Tanaka, J. Friml, Cell Discovery 2 (2016).
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Ł. Łangowski, K.T. Wabnik, H. Li, S. Vanneste, S. Naramoto, H. Tanaka, J. Friml, Cell Discovery 2 (2016).
2016 | Conference Paper | IST-REx-ID: 10810 |

SCP-ECG V3.0: An enhanced standard communication protocol for computer-assisted electrocardiography
P. Rubel, D. Pani, A. Schlögl, J. Fayn, F. Badilini, P. Macfarlane, A. Varri, in:, 2016 Computing in Cardiology Conference, Computing in Cardiology, 2016, pp. 309–312.
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P. Rubel, D. Pani, A. Schlögl, J. Fayn, F. Badilini, P. Macfarlane, A. Varri, in:, 2016 Computing in Cardiology Conference, Computing in Cardiology, 2016, pp. 309–312.
2016 | Conference Paper | IST-REx-ID: 1082 |

Relevant sparse codes with variational information bottleneck
M.J. Chalk, O. Marre, G. Tkačik, in:, Neural Information Processing Systems, 2016, pp. 1965–1973.
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M.J. Chalk, O. Marre, G. Tkačik, in:, Neural Information Processing Systems, 2016, pp. 1965–1973.
2016 | Journal Article | IST-REx-ID: 1083
KCTD12 auxiliary proteins modulate kinetics of GABAB receptor-mediated inhibition in Cholecystokinin-containing interneurons
S. Booker, D. Althof, A. Gross, D. Loreth, J. Müller, A. Unger, B. Fakler, A. Varro, M. Watanabe, M. Gassmann, B. Bettler, R. Shigemoto, I. Vida, Á. Kulik, Cerebral Cortex 27 (2016) 2318–2334.
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| DOI
S. Booker, D. Althof, A. Gross, D. Loreth, J. Müller, A. Unger, B. Fakler, A. Varro, M. Watanabe, M. Gassmann, B. Bettler, R. Shigemoto, I. Vida, Á. Kulik, Cerebral Cortex 27 (2016) 2318–2334.
2016 | Journal Article | IST-REx-ID: 1088
Geometric control and modeling of genome reprogramming
C. Uhler, G.V. Shivashankar, BioArchitecture 6 (2016) 76–84.
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| DOI
C. Uhler, G.V. Shivashankar, BioArchitecture 6 (2016) 76–84.
2016 | Conference Paper | IST-REx-ID: 1090 |

Nested weighted limit-average automata of bounded width
K. Chatterjee, T.A. Henzinger, J. Otop, in:, Schloss Dagstuhl - Leibniz-Zentrum für Informatik, 2016.
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K. Chatterjee, T.A. Henzinger, J. Otop, in:, Schloss Dagstuhl - Leibniz-Zentrum für Informatik, 2016.
2016 | Conference Paper | IST-REx-ID: 1093 |

Linear distances between Markov chains
P. Daca, T.A. Henzinger, J. Kretinsky, T. Petrov, in:, Schloss Dagstuhl - Leibniz-Zentrum für Informatik, 2016.
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P. Daca, T.A. Henzinger, J. Kretinsky, T. Petrov, in:, Schloss Dagstuhl - Leibniz-Zentrum für Informatik, 2016.
2016 | Book Chapter | IST-REx-ID: 1094
Immunogold protein localization on grid-glued freeze-fracture replicas
H. Harada, R. Shigemoto, in:, High-Resolution Imaging of Cellular Proteins, Springer, 2016, pp. 203–216.
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| DOI
H. Harada, R. Shigemoto, in:, High-Resolution Imaging of Cellular Proteins, Springer, 2016, pp. 203–216.
2016 | Conference Paper | IST-REx-ID: 1095 |

Local linearizability for concurrent container-type data structures
A. Haas, T.A. Henzinger, A. Holzer, C. Kirsch, M. Lippautz, H. Payer, A. Sezgin, A. Sokolova, H. Veith, in:, Leibniz International Proceedings in Informatics, Schloss Dagstuhl - Leibniz-Zentrum für Informatik, 2016.
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A. Haas, T.A. Henzinger, A. Holzer, C. Kirsch, M. Lippautz, H. Payer, A. Sezgin, A. Sokolova, H. Veith, in:, Leibniz International Proceedings in Informatics, Schloss Dagstuhl - Leibniz-Zentrum für Informatik, 2016.
2016 | Journal Article | IST-REx-ID: 1096
Actin rings of power
C. Schwayer, M.K. Sikora, J. Slovakova, R. Kardos, C.-P.J. Heisenberg, Developmental Cell 37 (2016) 493–506.
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C. Schwayer, M.K. Sikora, J. Slovakova, R. Kardos, C.-P.J. Heisenberg, Developmental Cell 37 (2016) 493–506.
2016 | Conference Paper | IST-REx-ID: 1097 |

Computational multicopter design
T. Du, A. Schulz, B. Zhu, B. Bickel, W. Matusik, in:, ACM, 2016.
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T. Du, A. Schulz, B. Zhu, B. Bickel, W. Matusik, in:, ACM, 2016.
2016 | Conference Paper | IST-REx-ID: 1098 |

Lifelong learning with weighted majority votes
A. Pentina, R. Urner, in:, Neural Information Processing Systems, 2016, pp. 3619–3627.
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A. Pentina, R. Urner, in:, Neural Information Processing Systems, 2016, pp. 3619–3627.
2016 | Conference Paper | IST-REx-ID: 1099 |

FlexMolds: Automatic design of flexible shells for molding
L. Malomo, N. Pietroni, B. Bickel, P. Cignoni, in:, ACM, 2016.
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L. Malomo, N. Pietroni, B. Bickel, P. Cignoni, in:, ACM, 2016.
2016 | Journal Article | IST-REx-ID: 1101
Rangefinder: A semisynthetic FRET sensor design algorithm
J. Mitchell, J. Whitfield, W. Zhang, C. Henneberger, H.L. Janovjak, M. O’Mara, C. Jackson, ACS SENSORS 1 (2016) 1286–1290.
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J. Mitchell, J. Whitfield, W. Zhang, C. Henneberger, H.L. Janovjak, M. O’Mara, C. Jackson, ACS SENSORS 1 (2016) 1286–1290.
2016 | Conference Paper | IST-REx-ID: 1102 |

Improving weakly-supervised object localization by micro-annotation
A. Kolesnikov, C. Lampert, in:, Proceedings of the British Machine Vision Conference 2016, BMVA Press, 2016, p. 92.1-92.12.
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A. Kolesnikov, C. Lampert, in:, Proceedings of the British Machine Vision Conference 2016, BMVA Press, 2016, p. 92.1-92.12.
2016 | Conference Paper | IST-REx-ID: 1103 |

Parallel reachability analysis for hybrid systems
A. Gurung, A. Deka, E. Bartocci, S. Bogomolov, R. Grosu, R. Ray, in:, IEEE, 2016.
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A. Gurung, A. Deka, E. Bartocci, S. Bogomolov, R. Grosu, R. Ray, in:, IEEE, 2016.
2016 | Conference Paper | IST-REx-ID: 1105
Estimating nonlinear neural response functions using GP priors and Kronecker methods
C. Savin, G. Tkačik, in:, Neural Information Processing Systems, 2016, pp. 3610–3618.
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C. Savin, G. Tkačik, in:, Neural Information Processing Systems, 2016, pp. 3610–3618.
2016 | Journal Article | IST-REx-ID: 11069 |

Nuclear envelope rupture is induced by actin-based nucleus confinement
E.M. Hatch, M.W. HETZER, Journal of Cell Biology 215 (2016) 27–36.
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E.M. Hatch, M.W. HETZER, Journal of Cell Biology 215 (2016) 27–36.
2016 | Journal Article | IST-REx-ID: 11070 |

Nucleoporin-mediated regulation of cell identity genes
A. Ibarra, C. Benner, S. Tyagi, J. Cool, M.W. HETZER, Genes & Development 30 (2016) 2253–2258.
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A. Ibarra, C. Benner, S. Tyagi, J. Cool, M.W. HETZER, Genes & Development 30 (2016) 2253–2258.
2016 | Journal Article | IST-REx-ID: 11071 |

Evolution of a transcriptional regulator from a transmembrane nucleoporin
T.M. Franks, C. Benner, I. Narvaiza, M.C.N. Marchetto, J.M. Young, H.S. Malik, F.H. Gage, M.W. HETZER, Genes & Development 30 (2016) 1155–1171.
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T.M. Franks, C. Benner, I. Narvaiza, M.C.N. Marchetto, J.M. Young, H.S. Malik, F.H. Gage, M.W. HETZER, Genes & Development 30 (2016) 1155–1171.
2016 | Journal Article | IST-REx-ID: 11072 |

p120-catenin prevents multinucleation through control of MKLP1-dependent RhoA activity during cytokinesis
R.A.H. van de Ven, J.S. de Groot, D. Park, R. van Domselaar, D. de Jong, K. Szuhai, E. van der Wall, O.M. Rueda, H.R. Ali, C. Caldas, P.J. van Diest, M.W. HETZER, E. Sahai, P.W.B. Derksen, Nature Communications 7 (2016).
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R.A.H. van de Ven, J.S. de Groot, D. Park, R. van Domselaar, D. de Jong, K. Szuhai, E. van der Wall, O.M. Rueda, H.R. Ali, C. Caldas, P.J. van Diest, M.W. HETZER, E. Sahai, P.W.B. Derksen, Nature Communications 7 (2016).
2016 | Conference Paper | IST-REx-ID: 1115 |

Efficient single sideband microwave to optical conversion using a LiNbO inf 3 inf WGM-resonator
A. Rueda, F. Sedlmeir, M. Collodo, U. Vogl, B. Stiller, G. Schunk, D. Strekalov, C. Marquardt, J.M. Fink, O. Painter, G. Leuchs, H. Schwefel, in:, IEEE, 2016.
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A. Rueda, F. Sedlmeir, M. Collodo, U. Vogl, B. Stiller, G. Schunk, D. Strekalov, C. Marquardt, J.M. Fink, O. Painter, G. Leuchs, H. Schwefel, in:, IEEE, 2016.
2016 | Thesis | IST-REx-ID: 1121 |

Selective barriers to horizontal gene transfer
H. Acar, Selective Barriers to Horizontal Gene Transfer, IST Austria, 2016.
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H. Acar, Selective Barriers to Horizontal Gene Transfer, IST Austria, 2016.
2016 | Thesis | IST-REx-ID: 1122 |

Tracking, correcting and absorbing water surface waves
M. Bojsen-Hansen, Tracking, Correcting and Absorbing Water Surface Waves, IST Austria, 2016.
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M. Bojsen-Hansen, Tracking, Correcting and Absorbing Water Surface Waves, IST Austria, 2016.
2016 | Thesis | IST-REx-ID: 1123 |

Eliminating higher-multiplicity intersections: an r-fold Whitney trick for the topological Tverberg conjecture
I. Mabillard, Eliminating Higher-Multiplicity Intersections: An r-Fold Whitney Trick for the Topological Tverberg Conjecture, IST Austria, 2016.
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I. Mabillard, Eliminating Higher-Multiplicity Intersections: An r-Fold Whitney Trick for the Topological Tverberg Conjecture, IST Austria, 2016.
2016 | Thesis | IST-REx-ID: 1124 |

Optical functionalization of human class A orphan G-protein coupled receptors
M. Morri, Optical Functionalization of Human Class A Orphan G-Protein Coupled Receptors, IST Austria, 2016.
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M. Morri, Optical Functionalization of Human Class A Orphan G-Protein Coupled Receptors, IST Austria, 2016.
2016 | Thesis | IST-REx-ID: 1125 |

Evolutionary proccesses in variable emvironments
S. Novak, Evolutionary Proccesses in Variable Emvironments, IST Austria, 2016.
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S. Novak, Evolutionary Proccesses in Variable Emvironments, IST Austria, 2016.
2016 | Thesis | IST-REx-ID: 1126 |

Theoretical foundations of multi-task lifelong learning
A. Pentina, Theoretical Foundations of Multi-Task Lifelong Learning, IST Austria, 2016.
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A. Pentina, Theoretical Foundations of Multi-Task Lifelong Learning, IST Austria, 2016.
2016 | Thesis | IST-REx-ID: 1128 |

Studying the complexities of transcriptional regulation
G. Rieckh, Studying the Complexities of Transcriptional Regulation, IST Austria, 2016.
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G. Rieckh, Studying the Complexities of Transcriptional Regulation, IST Austria, 2016.
2016 | Thesis | IST-REx-ID: 1129 |

Quantitative analysis of haptotactic cell migration
J. Schwarz, Quantitative Analysis of Haptotactic Cell Migration, IST Austria, 2016.
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J. Schwarz, Quantitative Analysis of Haptotactic Cell Migration, IST Austria, 2016.
2016 | Thesis | IST-REx-ID: 1130 |

Automatic synthesis of synchronisation primitives for concurrent programs
T. Tarrach, Automatic Synthesis of Synchronisation Primitives for Concurrent Programs, IST Austria, 2016.
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T. Tarrach, Automatic Synthesis of Synchronisation Primitives for Concurrent Programs, IST Austria, 2016.
2016 | Thesis | IST-REx-ID: 1131 |

Evolution of transcriptional regulatory sequences
M. Tugrul, Evolution of Transcriptional Regulatory Sequences, IST Austria, 2016.
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M. Tugrul, Evolution of Transcriptional Regulatory Sequences, IST Austria, 2016.
2016 | Conference Paper | IST-REx-ID: 1134
Tutorial: Software tools for hybrid systems verification transformation and synthesis C2E2 HyST and TuLiP
P. Duggirala, C. Fan, M. Potok, B. Qi, S. Mitra, M. Viswanathan, S. Bak, S. Bogomolov, T. Johnson, L. Nguyen, C. Schilling, A. Sogokon, H. Tran, W. Xiang, in:, 2016 IEEE Conference on Control Applications, IEEE, 2016.
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P. Duggirala, C. Fan, M. Potok, B. Qi, S. Mitra, M. Viswanathan, S. Bak, S. Bogomolov, T. Johnson, L. Nguyen, C. Schilling, A. Sogokon, H. Tran, W. Xiang, in:, 2016 IEEE Conference on Control Applications, IEEE, 2016.
2016 | Conference Paper | IST-REx-ID: 1135 |

Synthesizing time triggered schedules for switched networks with faulty links
G. Avni, S. Guha, G. Rodríguez Navas, in:, Proceedings of the 13th International Conference on Embedded Software , ACM, 2016.
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G. Avni, S. Guha, G. Rodríguez Navas, in:, Proceedings of the 13th International Conference on Embedded Software , ACM, 2016.
2016 | Conference Paper | IST-REx-ID: 1136 |

Space-time sculpting of liquid animation
P. Manteaux, U. Vimont, C.J. Wojtan, D. Rohmer, M. Cani, in:, Proceedings of the 9th International Conference on Motion in Games , ACM, 2016.
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P. Manteaux, U. Vimont, C.J. Wojtan, D. Rohmer, M. Cani, in:, Proceedings of the 9th International Conference on Motion in Games , ACM, 2016.
2016 | Journal Article | IST-REx-ID: 1137 |

RASGRP1 deficiency causes immunodeficiency with impaired cytoskeletal dynamics
Salzer E, Çaǧdaş D, Hons M, Mace E, Garncarz W, Petronczki O, Platzer R, Pfajfer L, Bilic I, Ban S, Willmann K, Mukherjee M, Supper V, Hsu H, Banerjee P, Sinha P, Mcclanahan F, Zlabinger G, Pickl W, Gribben J, Stockinger H, Bennett K, Huppa J, Dupré L, Sanal Ö, Jäger U, Sixt MK, Tezcan I, Orange J, Boztug K. 2016. RASGRP1 deficiency causes immunodeficiency with impaired cytoskeletal dynamics. Nature Immunology. 17(12), 1352–1360.
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Salzer E, Çaǧdaş D, Hons M, Mace E, Garncarz W, Petronczki O, Platzer R, Pfajfer L, Bilic I, Ban S, Willmann K, Mukherjee M, Supper V, Hsu H, Banerjee P, Sinha P, Mcclanahan F, Zlabinger G, Pickl W, Gribben J, Stockinger H, Bennett K, Huppa J, Dupré L, Sanal Ö, Jäger U, Sixt MK, Tezcan I, Orange J, Boztug K. 2016. RASGRP1 deficiency causes immunodeficiency with impaired cytoskeletal dynamics. Nature Immunology. 17(12), 1352–1360.
2016 | Conference Paper | IST-REx-ID: 1138 |

Quantitative automata under probabilistic semantics
K. Chatterjee, T.A. Henzinger, J. Otop, in:, Proceedings of the 31st Annual ACM/IEEE Symposium, IEEE, 2016, pp. 76–85.
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K. Chatterjee, T.A. Henzinger, J. Otop, in:, Proceedings of the 31st Annual ACM/IEEE Symposium, IEEE, 2016, pp. 76–85.
2016 | Journal Article | IST-REx-ID: 1139
Microtubule aging probed by microfluidics assisted tubulin washout
C.F. Düllberg, N. Cade, T. Surrey, Molecular Biology and Evolution 27 (2016) 3563–3573.
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C.F. Düllberg, N. Cade, T. Surrey, Molecular Biology and Evolution 27 (2016) 3563–3573.
2016 | Conference Paper | IST-REx-ID: 1140 |

Model and objective separation with conditional lower bounds disjunction is harder than conjunction
K. Chatterjee, W. Dvoák, M. Henzinger, V. Loitzenbauer, in:, Proceedings of the 31st Annual ACM/IEEE Symposium on Logic in Computer Science, IEEE, 2016, pp. 197–206.
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K. Chatterjee, W. Dvoák, M. Henzinger, V. Loitzenbauer, in:, Proceedings of the 31st Annual ACM/IEEE Symposium on Logic in Computer Science, IEEE, 2016, pp. 197–206.
2016 | Journal Article | IST-REx-ID: 1141
Hierarchic genetic strategy with maturing as a generic tool for multiobjective optimization
R. Łazarz, M. Idzik, K. Gądek, E.P. Gajda-Zagorska, Journal of Computational Science 17 (2016) 249–260.
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R. Łazarz, M. Idzik, K. Gądek, E.P. Gajda-Zagorska, Journal of Computational Science 17 (2016) 249–260.
2016 | Journal Article | IST-REx-ID: 1142 |

Heme drives hemolysis-induced susceptibility to infection via disruption of phagocyte functions
Martins R, Maier J, Gorki A, Huber K, Sharif O, Starkl P, Saluzzo S, Quattrone F, Gawish R, Lakovits K, Aichinger M, Radic Sarikas B, Lardeau C, Hladik A, Korosec A, Brown M, Vaahtomeri K, Duggan M, Kerjaschki D, Esterbauer H, Colinge J, Eisenbarth S, Decker T, Bennett K, Kubicek S, Sixt MK, Superti Furga G, Knapp S. 2016. Heme drives hemolysis-induced susceptibility to infection via disruption of phagocyte functions. Nature Immunology. 17(12), 1361–1372.
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Martins R, Maier J, Gorki A, Huber K, Sharif O, Starkl P, Saluzzo S, Quattrone F, Gawish R, Lakovits K, Aichinger M, Radic Sarikas B, Lardeau C, Hladik A, Korosec A, Brown M, Vaahtomeri K, Duggan M, Kerjaschki D, Esterbauer H, Colinge J, Eisenbarth S, Decker T, Bennett K, Kubicek S, Sixt MK, Superti Furga G, Knapp S. 2016. Heme drives hemolysis-induced susceptibility to infection via disruption of phagocyte functions. Nature Immunology. 17(12), 1361–1372.
2016 | Journal Article | IST-REx-ID: 1143 |

Ground states of large bosonic systems: The gross Pitaevskii limit revisited
P. Nam, N. Rougerie, R. Seiringer, Analysis and PDE 9 (2016) 459–485.
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P. Nam, N. Rougerie, R. Seiringer, Analysis and PDE 9 (2016) 459–485.
2016 | Journal Article | IST-REx-ID: 1145 |

Enquiry into the topology of plasma membrane localized PIN auxin transport components
T. Nodzyński, S. Vanneste, M. Zwiewka, M. Pernisová, J. Hejátko, J. Friml, Molecular Plant 9 (2016) 1504–1519.
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T. Nodzyński, S. Vanneste, M. Zwiewka, M. Pernisová, J. Hejátko, J. Friml, Molecular Plant 9 (2016) 1504–1519.
2016 | Journal Article | IST-REx-ID: 1147 |

Auxin flow mediated competition between axillary buds to restore apical dominance
J. Balla, Z. Medved’Ová, P. Kalousek, N. Matiješčuková, J. Friml, V. Reinöhl, S. Procházka, Scientific Reports 6 (2016).
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J. Balla, Z. Medved’Ová, P. Kalousek, N. Matiješčuková, J. Friml, V. Reinöhl, S. Procházka, Scientific Reports 6 (2016).
2016 | Journal Article | IST-REx-ID: 1148
Adaptive moment closure for parameter inference of biochemical reaction networks
C. Schilling, S. Bogomolov, T.A. Henzinger, A. Podelski, J. Ruess, Biosystems 149 (2016) 15–25.
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C. Schilling, S. Bogomolov, T.A. Henzinger, A. Podelski, J. Ruess, Biosystems 149 (2016) 15–25.
2016 | Journal Article | IST-REx-ID: 1149
A study of rigorous ODE integrators for multi scale set oriented computations
T. Miyaji, P. Pilarczyk, M. Gameiro, H. Kokubu, K. Mischaikow, Applied Numerical Mathematics 107 (2016) 34–47.
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T. Miyaji, P. Pilarczyk, M. Gameiro, H. Kokubu, K. Mischaikow, Applied Numerical Mathematics 107 (2016) 34–47.
2016 | Journal Article | IST-REx-ID: 1150
A Radical Break Restraining Neutrophil Migration
J. Renkawitz, M.K. Sixt, Developmental Cell 38 (2016) 448–450.
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J. Renkawitz, M.K. Sixt, Developmental Cell 38 (2016) 448–450.
2016 | Journal Article | IST-REx-ID: 1151 |

A noncanonical auxin sensing mechanism is required for organ morphogenesis in arabidopsis
S. Simonini, J. Deb, L. Moubayidin, P. Stephenson, M. Valluru, A. Freire Rios, K. Sorefan, D. Weijers, J. Friml, L. Östergaard, Genes and Development 30 (2016) 2286–2296.
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S. Simonini, J. Deb, L. Moubayidin, P. Stephenson, M. Valluru, A. Freire Rios, K. Sorefan, D. Weijers, J. Friml, L. Östergaard, Genes and Development 30 (2016) 2286–2296.
2016 | Journal Article | IST-REx-ID: 1153 |

A model of differential growth guided apical hook formation in plants
P. Žádníková, K.T. Wabnik, A. Abuzeineh, M. Gallemí, D. Van Der Straeten, R. Smith, D. Inze, J. Friml, P. Prusinkiewicz, E. Benková, Plant Cell 28 (2016) 2464–2477.
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P. Žádníková, K.T. Wabnik, A. Abuzeineh, M. Gallemí, D. Van Der Straeten, R. Smith, D. Inze, J. Friml, P. Prusinkiewicz, E. Benková, Plant Cell 28 (2016) 2464–2477.
2016 | Journal Article | IST-REx-ID: 1154 |

A microfluidic device for measuring cell migration towards substrate bound and soluble chemokine gradients
J. Schwarz, V. Bierbaum, J. Merrin, T. Frank, R. Hauschild, M.T. Bollenbach, S. Tay, M.K. Sixt, M. Mehling, Scientific Reports 6 (2016).
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J. Schwarz, V. Bierbaum, J. Merrin, T. Frank, R. Hauschild, M.T. Bollenbach, S. Tay, M.K. Sixt, M. Mehling, Scientific Reports 6 (2016).
2016 | Journal Article | IST-REx-ID: 1156
Facets of the r-stable (n, k)-hypersimplex
T. Hibi, L.T. Solus, Annals of Combinatorics 20 (2016) 815–829.
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T. Hibi, L.T. Solus, Annals of Combinatorics 20 (2016) 815–829.
2016 | Journal Article | IST-REx-ID: 1157 |

Tracy-widom distribution for the largest eigenvalue of real sample covariance matrices with general population
J. Lee, K. Schnelli, Annals of Applied Probability 26 (2016) 3786–3839.
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J. Lee, K. Schnelli, Annals of Applied Probability 26 (2016) 3786–3839.
2016 | Journal Article | IST-REx-ID: 1158 |

Shedding light on the grey zone of speciation along a continuum of genomic divergence
C. Roux, C. Fraisse, J. Romiguier, Y. Anciaux, N. Galtier, N. Bierne, PLoS Biology 14 (2016).
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C. Roux, C. Fraisse, J. Romiguier, Y. Anciaux, N. Galtier, N. Bierne, PLoS Biology 14 (2016).
2016 | Conference Paper | IST-REx-ID: 1164 |

Hanani-Tutte for radial planarity II
R. Fulek, M. Pelsmajer, M. Schaefer, in:, Springer, 2016, pp. 468–481.
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R. Fulek, M. Pelsmajer, M. Schaefer, in:, Springer, 2016, pp. 468–481.
2016 | Conference Paper | IST-REx-ID: 1165 |

C-planarity of embedded cyclic c-graphs
R. Fulek, in:, Springer, 2016, pp. 94–106.
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R. Fulek, in:, Springer, 2016, pp. 94–106.