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473 Publications

 

2019 | Research Data Reference | IST-REx-ID: 9731
Additional file 11 of Chlamydia pan-genomic analysis reveals balance between host adaptation and selective pressure to genome reduction
O. Sigalova, A. Chaplin, O. Bochkareva, P. Shelyakin, V. Filaretov, E. Akkuratov, V. Burskaia, M.S. Gelfand, (2019).
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2019 | Research Data Reference | IST-REx-ID: 9783
Additional file 10 of Chlamydia pan-genomic analysis reveals balance between host adaptation and selective pressure to genome reduction
O.M. Sigalova, A.V. Chaplin, O. Bochkareva, P.V. Shelyakin, V.A. Filaretov, E.E. Akkuratov, V. Burskaia, M.S. Gelfand, (2019).
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2019 | Research Data Reference | IST-REx-ID: 9890
Additional file 15 of Chlamydia pan-genomic analysis reveals balance between host adaptation and selective pressure to genome reduction
O.M. Sigalova, A.V. Chaplin, O. Bochkareva, P.V. Shelyakin, V.A. Filaretov, E.E. Akkuratov, V. Burskaia, M.S. Gelfand, (2019).
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2019 | Research Data Reference | IST-REx-ID: 9892
Additional file 16 of Chlamydia pan-genomic analysis reveals balance between host adaptation and selective pressure to genome reduction
O.M. Sigalova, A.V. Chaplin, O. Bochkareva, P.V. Shelyakin, V.A. Filaretov, E.E. Akkuratov, V. Burskaia, M.S. Gelfand, (2019).
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2019 | Research Data Reference | IST-REx-ID: 9893
Additional file 17 of Chlamydia pan-genomic analysis reveals balance between host adaptation and selective pressure to genome reduction
O.M. Sigalova, A.V. Chaplin, O. Bochkareva, P.V. Shelyakin, V.A. Filaretov, E.E. Akkuratov, V. Burskaia, M.S. Gelfand, (2019).
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2019 | Research Data Reference | IST-REx-ID: 9894
Additional file 18 of Chlamydia pan-genomic analysis reveals balance between host adaptation and selective pressure to genome reduction
O.M. Sigalova, A.V. Chaplin, O. Bochkareva, P.V. Shelyakin, V.A. Filaretov, E.E. Akkuratov, V. Burskaia, M.S. Gelfand, (2019).
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2019 | Research Data Reference | IST-REx-ID: 9895
Additional file 19 of Chlamydia pan-genomic analysis reveals balance between host adaptation and selective pressure to genome reduction
O.M. Sigalova, A.V. Chaplin, O. Bochkareva, P.V. Shelyakin, V.A. Filaretov, E.E. Akkuratov, V. Burskaia, M.S. Gelfand, (2019).
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2019 | Journal Article | IST-REx-ID: 6898 | OA
Chlamydia pan-genomic analysis reveals balance between host adaptation and selective pressure to genome reduction
O.M. Sigalova, A.V. Chaplin, O. Bochkareva, P.V. Shelyakin, V.A. Filaretov, E.E. Akkuratov, V. Burskaia, M.S. Gelfand, BMC Genomics 20 (2019).
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2019 | Research Data Reference | IST-REx-ID: 9898
Additional file 21 of Chlamydia pan-genomic analysis reveals balance between host adaptation and selective pressure to genome reduction
O.M. Sigalova, A.V. Chaplin, O. Bochkareva, P.V. Shelyakin, V.A. Filaretov, E.E. Akkuratov, V. Burskaia, M.S. Gelfand, (2019).
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2019 | Research Data Reference | IST-REx-ID: 9897
Additional file 20 of Chlamydia pan-genomic analysis reveals balance between host adaptation and selective pressure to genome reduction
O.M. Sigalova, A.V. Chaplin, O. Bochkareva, P.V. Shelyakin, V.A. Filaretov, E.E. Akkuratov, V. Burskaia, M.S. Gelfand, (2019).
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2019 | Research Data Reference | IST-REx-ID: 9901
Additional file 9 of Chlamydia pan-genomic analysis reveals balance between host adaptation and selective pressure to genome reduction
O.M. Sigalova, A.V. Chaplin, O. Bochkareva, P.V. Shelyakin, V.A. Filaretov, E.E. Akkuratov, V. Burskaia, M.S. Gelfand, (2019).
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2019 | Research Data Reference | IST-REx-ID: 9899
Additional file 2 of Chlamydia pan-genomic analysis reveals balance between host adaptation and selective pressure to genome reduction
O.M. Sigalova, A.V. Chaplin, O. Bochkareva, P.V. Shelyakin, V.A. Filaretov, E.E. Akkuratov, V. Burskaia, M.S. Gelfand, (2019).
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2019 | Research Data Reference | IST-REx-ID: 9900
Additional file 5 of Chlamydia pan-genomic analysis reveals balance between host adaptation and selective pressure to genome reduction
O.M. Sigalova, A.V. Chaplin, O. Bochkareva, P.V. Shelyakin, V.A. Filaretov, E.E. Akkuratov, V. Burskaia, M.S. Gelfand, (2019).
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2019 | Research Data Reference | IST-REx-ID: 9896
Additional file 1 of Chlamydia pan-genomic analysis reveals balance between host adaptation and selective pressure to genome reduction
O.M. Sigalova, A.V. Chaplin, O. Bochkareva, P.V. Shelyakin, V.A. Filaretov, E.E. Akkuratov, V. Burskaia, M.S. Gelfand, (2019).
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2019 | Journal Article | IST-REx-ID: 9460 | OA
DNA demethylation by ROS1a in rice vegetative cells promotes methylation in sperm
M.Y. Kim, A. Ono, S. Scholten, T. Kinoshita, D. ZILBERMAN, T. Okamoto, R.L. Fischer, Proceedings of the National Academy of Sciences 116 (2019) 9652–9657.
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2019 | Journal Article | IST-REx-ID: 9530 | OA
DNA methylation is maintained with high fidelity in the honey bee germline and exhibits global non-functional fluctuations during somatic development
K.D. Harris, J.P.B. Lloyd, K. Domb, D. ZILBERMAN, A. Zemach, Epigenetics and Chromatin 12 (2019).
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2019 | Journal Article | IST-REx-ID: 6609 | OA
Stationary entangled radiation from micromechanical motion
S. Barzanjeh, E. Redchenko, M. Peruzzo, M. Wulf, D. Lewis, G.M. Arnold, J.M. Fink, Nature 570 (2019) 480–483.
View | DOI | Download Preprint (ext.) | arXiv
 

2019 | Journal Article | IST-REx-ID: 6053 | OA
Quantum electromechanics of a hypersonic crystal
M. Kalaee, M. Mirhosseini, P.B. Dieterle, M. Peruzzo, J.M. Fink, O. Painter, Nature Nanotechnology 14 (2019) 334–339.
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2019 | Conference Paper | IST-REx-ID: 6780 | OA
Modular verification for almost-sure termination of probabilistic programs
M. Huang, H. Fu, K. Chatterjee, A.K. Goharshady, in:, Proceedings of the 34th ACM International Conference on Object-Oriented Programming, Systems, Languages, and Applications , ACM, 2019.
View | Files available | DOI | arXiv
 

2019 | Conference Paper | IST-REx-ID: 6175 | OA
Cost analysis of nondeterministic probabilistic programs
P. Wang, H. Fu, A.K. Goharshady, K. Chatterjee, X. Qin, W. Shi, in:, PLDI 2019: Proceedings of the 40th ACM SIGPLAN Conference on Programming Language Design and Implementation, Association for Computing Machinery, 2019, pp. 204–220.
View | Files available | DOI | arXiv
 

2019 | Journal Article | IST-REx-ID: 7158 | OA
Faster algorithms for dynamic algebraic queries in basic RSMs with constant treewidth
K. Chatterjee, A.K. Goharshady, P. Goyal, R. Ibsen-Jensen, A. Pavlogiannis, ACM Transactions on Programming Languages and Systems 41 (2019).
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2019 | Conference Paper | IST-REx-ID: 6056 | OA
Probabilistic smart contracts: Secure randomness on the blockchain
K. Chatterjee, A.K. Goharshady, A. Pourdamghani, in:, IEEE International Conference on Blockchain and Cryptocurrency, IEEE, 2019.
View | Files available | DOI | Download Preprint (ext.) | arXiv
 

2019 | Journal Article | IST-REx-ID: 7014 | OA
Non-polynomial worst-case analysis of recursive programs
K. Chatterjee, H. Fu, A.K. Goharshady, ACM Transactions on Programming Languages and Systems 41 (2019).
View | Files available | DOI | Download Preprint (ext.) | arXiv
 

2019 | Conference Paper | IST-REx-ID: 6378 | OA
Hybrid Mining: Exploiting blockchain’s computational power for distributed problem solving
K. Chatterjee, A.K. Goharshady, A. Pourdamghani, in:, Proceedings of the 34th ACM Symposium on Applied Computing, ACM, 2019, pp. 374–381.
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2019 | Journal Article | IST-REx-ID: 6380 | OA
Efficient parameterized algorithms for data packing
K. Chatterjee, A.K. Goharshady, N. Okati, A. Pavlogiannis, Proceedings of the ACM on Programming Languages 3 (2019).
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2019 | Conference Paper | IST-REx-ID: 6490 | OA
The treewidth of smart contracts
K. Chatterjee, A.K. Goharshady, E.K. Goharshady, in:, Proceedings of the 34th ACM Symposium on Applied Computing, ACM, n.d., pp. 400–408.
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2019 | Journal Article | IST-REx-ID: 6260 | OA
Pinstatic acid promotes auxin transport by inhibiting PIN internalization
A. Oochi, J. Hajny, K. Fukui, Y. Nakao, M.C. Gallei, M. Quareshy, K. Takahashi, T. Kinoshita, S. Harborough, S. Kepinski, H. Kasahara, R. Napier, J. Friml, K. Hayashi, Plant Physiology 180 (2019) 1152–1165.
View | Files available | DOI | Download Published Version (ext.) | PubMed | Europe PMC
 

2019 | Thesis | IST-REx-ID: 6894 | OA
Automatic time-unbounded reachability analysis of hybrid systems
M. Giacobbe, Automatic Time-Unbounded Reachability Analysis of Hybrid Systems, IST Austria, 2019.
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2019 | Preprint | IST-REx-ID: 8305 | OA
Bootstrapping consensus without trusted setup: fully asynchronous distributed key generation
E. Kokoris Kogias, A. Spiegelman, D. Malkhi, I. Abraham, Cryptology EPrint Archive (n.d.).
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2019 | Thesis | IST-REx-ID: 6392 | OA
Quantitative investigation of gene expression principles through combinatorial drug perturbation and theory
M. Lukacisin, Quantitative Investigation of Gene Expression Principles through Combinatorial Drug Perturbation and Theory, IST Austria, 2019.
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2019 | Thesis | IST-REx-ID: 6435 | OA
Collective defenses of garden ants against a fungal pathogen
B.E. Casillas Perez, Collective Defenses of Garden Ants against a Fungal Pathogen, IST Austria, 2019.
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2019 | Thesis | IST-REx-ID: 6891 | OA
The implication of cytoskeletal dynamics on leukocyte migration
A. Kopf, The Implication of Cytoskeletal Dynamics on Leukocyte Migration, IST Austria, 2019.
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2019 | Journal Article | IST-REx-ID: 6328 | OA
Nuclear positioning facilitates amoeboid migration along the path of least resistance
J. Renkawitz, A. Kopf, J.A. Stopp, I. de Vries, M.K. Driscoll, J. Merrin, R. Hauschild, E.S. Welf, G. Danuser, R. Fiolka, M.K. Sixt, Nature 568 (2019) 546–550.
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2019 | Journal Article | IST-REx-ID: 6877
The neural crest pitches in to remove apoptotic debris
A. Kopf, M.K. Sixt, Cell 179 (2019) 51–53.
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2019 | Thesis | IST-REx-ID: 6269 | OA
Clathrin-Mediated endocytosis, post-endocytic trafficking and their regulatory controls in plants
M. Narasimhan, Clathrin-Mediated Endocytosis, Post-Endocytic Trafficking and Their Regulatory Controls in Plants , IST Austria, 2019.
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2019 | Thesis | IST-REx-ID: 6947 | OA
Lymph node mechanics: Deciphering the interplay between stroma contractility, morphology and lymphocyte trafficking
F.P. Assen, Lymph Node Mechanics: Deciphering the Interplay between Stroma Contractility, Morphology and Lymphocyte Trafficking, IST Austria, 2019.
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2019 | Thesis | IST-REx-ID: 6849 | OA
The role of CCK-interneurons in regulating hippocampal network dynamics
D.K. Rangel Guerrero, The Role of CCK-Interneurons in Regulating Hippocampal Network Dynamics, IST Austria, 2019.
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2019 | Journal Article | IST-REx-ID: 6848 | OA
Structure and mechanism of mitochondrial proton-translocating transhydrogenase
D. Kampjut, L.A. Sazanov, Nature 573 (2019) 291–295.
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2019 | Journal Article | IST-REx-ID: 6508 | OA
Bulk actin dynamics drive phase segregation in zebrafish oocytes
S. Shamipour, R. Kardos, S. Xue, B. Hof, E.B. Hannezo, C.-P.J. Heisenberg, Cell 177 (2019) 1463–1479.e18.
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2019 | Journal Article | IST-REx-ID: 7001 | OA
Mechanosensation of tight junctions depends on ZO-1 phase separation and flow
C. Schwayer, S. Shamipour, K. Pranjic-Ferscha, A. Schauer, M. Balda, M. Tada, K. Matter, C.-P.J. Heisenberg, Cell 179 (2019) 937–952.e18.
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2019 | Journal Article | IST-REx-ID: 6187 | OA
A conserved major facilitator superfamily member orchestrates a subset of O-glycosylation to aid macrophage tissue invasion
K. Valosková, J. Biebl, M. Roblek, S. Emtenani, A. György, M. Misova, A. Ratheesh, P. Rodrigues, K. Shkarina, I.S.B. Larsen, S.Y. Vakhrushev, H. Clausen, D.E. Siekhaus, ELife 8 (2019).
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2019 | Thesis | IST-REx-ID: 6546 | OA
The role of a highly conserved major facilitator superfamily member in Drosophila embryonic macrophage migration
K. Valosková, The Role of a Highly Conserved Major Facilitator Superfamily Member in Drosophila Embryonic Macrophage Migration, IST Austria, 2019.
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2019 | Journal Article | IST-REx-ID: 6830 | OA
Memo1 tiles the radial glial cell grid
X. Contreras, S. Hippenmeyer, Neuron 103 (2019) 750–752.
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2019 | Thesis | IST-REx-ID: 6371 | OA
On the nature of gene regulatory design - The biophysics of transcription factor binding shapes gene regulation
C. Igler, On the Nature of Gene Regulatory Design - The Biophysics of Transcription Factor Binding Shapes Gene Regulation, IST Austria, 2019.
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2019 | Thesis | IST-REx-ID: 6363 | OA
Parvalbumin+ interneurons enable efficient pattern separation in hippocampal microcircuits
C.M. Espinoza Martinez, Parvalbumin+ Interneurons Enable Efficient Pattern Separation in Hippocampal Microcircuits, IST Austria, 2019.
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2019 | Thesis | IST-REx-ID: 7132 | OA
Design and characterization of methods and biological components to realize synthetic neurotransmission
C. Mckenzie, Design and Characterization of Methods and Biological Components to Realize Synthetic Neurotransmission, IST Austria, 2019.
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2019 | Journal Article | IST-REx-ID: 5949 | OA
Disrupted-in-schizophrenia 1 overexpression disrupts hippocampal coding and oscillatory synchronization
K. Käfer, H. Malagon-Vina, D. Dickerson, J. O’Neill, S.V. Trossbach, C. Korth, J.L. Csicsvari, Hippocampus 29 (2019) 802–816.
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2019 | Thesis | IST-REx-ID: 6825 | OA
The hippocampus and medial prefrontal cortex during flexible behavior
K. Käfer, The Hippocampus and Medial Prefrontal Cortex during Flexible Behavior, IST Austria, 2019.
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2019 | Journal Article | IST-REx-ID: 6486 | OA
Relaminarization of pipe flow by means of 3D-printed shaped honeycombs
J. Kühnen, D. Scarselli, B. Hof, Journal of Fluids Engineering 141 (2019).
View | Files available | DOI | Download Preprint (ext.) | arXiv
 

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