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371 Publications


2015 | Technical Report | IST-REx-ID: 5432 | OA
The complexity of evolutionary games on graphs
K. Chatterjee, R. Ibsen-Jensen, M. Nowak, The Complexity of Evolutionary Games on Graphs, IST Austria, 2015.
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2015 | Technical Report | IST-REx-ID: 5440 | OA
The complexity of evolutionary games on graphs
K. Chatterjee, R. Ibsen-Jensen, M. Nowak, The Complexity of Evolutionary Games on Graphs, IST Austria, 2015.
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2015 | Technical Report | IST-REx-ID: 5443 | OA
A symbolic SAT-based algorithm for almost-sure reachability with small strategies in POMDPs
K. Chatterjee, M. Chmelik, J. Davies, A Symbolic SAT-Based Algorithm for Almost-Sure Reachability with Small Strategies in POMDPs, IST Austria, 2015.
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2015 | Technical Report | IST-REx-ID: 5444 | OA
Reconstructing robust phylogenies of metastatic cancers
J. Reiter, A. Makohon-Moore, J. Gerold, I. Bozic, K. Chatterjee, C. Iacobuzio-Donahue, B. Vogelstein, M. Nowak, Reconstructing Robust Phylogenies of Metastatic Cancers, IST Austria, 2015.
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2015 | Conference Paper | IST-REx-ID: 1603 | OA
Counterexample explanation by learning small strategies in Markov decision processes
T. Brázdil, K. Chatterjee, M. Chmelik, A. Fellner, J. Kretinsky, in:, Springer, 2015, pp. 158–177.
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2015 | Journal Article | IST-REx-ID: 5749 | OA
Adaptation to Parasites and Costs of Parasite Resistance in Mutator and Nonmutator Bacteria
S. Wielgoss, T. Bergmiller, A.M. Bischofberger, A.R. Hall, Molecular Biology and Evolution 33 (2015) 770–782.
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2015 | Journal Article | IST-REx-ID: 5804
From prima quadraginta octant to lattice sphere through primitive integer operations
R. Biswas, P. Bhowmick, Theoretical Computer Science 624 (2015) 56–72.
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2015 | Journal Article | IST-REx-ID: 5807
On different topological classes of spherical geodesic paths and circles inZ3
R. Biswas, P. Bhowmick, Theoretical Computer Science 605 (2015) 146–163.
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2015 | Journal Article | IST-REx-ID: 5808
Layer the sphere
R. Biswas, P. Bhowmick, The Visual Computer 31 (2015) 787–797.
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2015 | Journal Article | IST-REx-ID: 1939
Erratum to: Excitation spectrum of interacting bosons in the Mean-Field Infinite-Volume limit
J. Dereziński, M.M. Napiórkowski, Annales Henri Poincare 16 (2015) 1709–1711.
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2015 | Journal Article | IST-REx-ID: 594
Structural basis of transcription initiation by RNA polymerase II
S. Sainsbury, C. Bernecky, P. Cramer, Nature Reviews Molecular Cell Biology 16 (2015) 129–143.
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2015 | Technical Report | IST-REx-ID: 5441 | OA
Algorithms for algebraic path properties in concurrent systems of constant treewidth components
K. Chatterjee, R. Ibsen-Jensen, A.K. Goharshady, A. Pavlogiannis, Algorithms for Algebraic Path Properties in Concurrent Systems of Constant Treewidth Components, IST Austria, 2015.
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2015 | Technical Report | IST-REx-ID: 5442 | OA
Algorithms for algebraic path properties in concurrent systems of constant treewidth components
1 Anonymous, 2 Anonymous, 3 Anonymous, 4 Anonymous, Algorithms for Algebraic Path Properties in Concurrent Systems of Constant Treewidth Components, IST Austria, 2015.
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2015 | Journal Article | IST-REx-ID: 6118 | OA
Environmental CO2 inhibits Caenorhabditis elegans egg-laying by modulating olfactory neurons and evokes widespread changes in neural activity
L.A. Fenk, M. de Bono, Proceedings of the National Academy of Sciences 112 (2015) E3525–E3534.
View | Files available | DOI | PubMed | Europe PMC
 

2015 | Journal Article | IST-REx-ID: 6120 | OA
Decoding a neural circuit controlling global animal state in C. elegans
P. Laurent, Z. Soltesz, G.M. Nelson, C. Chen, F. Arellano-Carbajal, E. Levy, M. de Bono, ELife 4 (2015).
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2015 | Conference Paper | IST-REx-ID: 1511 | OA
On generalized Heawood inequalities for manifolds: A Van Kampen–Flores-type nonembeddability result
X. Goaoc, I. Mabillard, P. Paták, Z. Patakova, M. Tancer, U. Wagner, in:, Schloss Dagstuhl - Leibniz-Zentrum für Informatik, 2015, pp. 476–490.
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2015 | Journal Article | IST-REx-ID: 1619 | OA
Quantifying the determinants of evolutionary dynamics leading to drug resistance
G. Chevereau, M. Lukacisinova, T. Batur, A. Guvenek, D. Ayhan, E. Toprak, M.T. Bollenbach, PLoS Biology 13 (2015).
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2015 | Conference Paper | IST-REx-ID: 1637 | OA
The complexity of general-valued CSPs
V. Kolmogorov, A. Krokhin, M. Rolinek, in:, IEEE, 2015, pp. 1246–1258.
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2015 | Journal Article | IST-REx-ID: 6507
Structural basis for collagen recognition by the immune receptor OSCAR
L. Zhou, J.M. Hinerman, M. Blaszczyk, J.L.C. Miller, D.G. Conrady, A.D. Barrow, D.Y. Chirgadze, D. Bihan, R.W. Farndale, A.B. Herr, Blood 127 (2015) 529–537.
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2015 | Journal Article | IST-REx-ID: 1576 | OA
Stochastic proofreading mechanism alleviates crosstalk in transcriptional regulation
S.A. Cepeda Humerez, G. Rieckh, G. Tkačik, Physical Review Letters 115 (2015).
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2015 | Journal Article | IST-REx-ID: 6736 | OA
Scaling exponent of list decoders with applications to polar codes
M. Mondelli, H. Hassani, R. Urbanke, IEEE Transactions on Information Theory 61 (2015) 4838–4851.
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2015 | Journal Article | IST-REx-ID: 6737 | OA
Achieving Marton’s region for broadcast channels using polar codes
M. Mondelli, H. Hassani, I. Sason, R. Urbanke, IEEE Transactions on Information Theory 61 (2015) 783–800.
View | DOI | Download Preprint (ext.) | arXiv
 

2015 | Journal Article | IST-REx-ID: 7070
Magnetization of underdoped YBa2Cu3Oy above the irreversibility field
J.F. Yu, B.J. Ramshaw, I. Kokanović, K.A. Modic, N. Harrison, J. Day, R. Liang, W.N. Hardy, D.A. Bonn, A. McCollam, S.R. Julian, J.R. Cooper, Physical Review B 92 (2015).
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2015 | Journal Article | IST-REx-ID: 7739 | OA
Replicated analysis of the genetic architecture of quantitative traits in two wild great tit populations
A.W. Santure, J. Poissant, I. De Cauwer, K. van Oers, M.R. Robinson, J.L. Quinn, M.A.M. Groenen, M.E. Visser, B.C. Sheldon, J. Slate, Molecular Ecology 24 (2015) 6148–6162.
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2015 | Journal Article | IST-REx-ID: 7741 | OA
Social genetic and social environment effects on parental and helper care in a cooperatively breeding bird
M.J. Adams, M.R. Robinson, M.-E. Mannarelli, B.J. Hatchwell, Proceedings of the Royal Society B: Biological Sciences 282 (2015).
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2015 | Journal Article | IST-REx-ID: 7742
Population genetic differentiation of height and body mass index across Europe
M.R. Robinson, G. Hemani, C. Medina-Gomez, M. Mezzavilla, T. Esko, K. Shakhbazov, J.E. Powell, A. Vinkhuyzen, S.I. Berndt, S. Gustafsson, A.E. Justice, B. Kahali, A.E. Locke, T.H. Pers, S. Vedantam, A.R. Wood, W. van Rheenen, O.A. Andreassen, P. Gasparini, A. Metspalu, L.H. van den Berg, J.H. Veldink, F. Rivadeneira, T.M. Werge, G.R. Abecasis, D.I. Boomsma, D.I. Chasman, E.J.C. de Geus, T.M. Frayling, J.N. Hirschhorn, J.J. Hottenga, E. Ingelsson, R.J.F. Loos, P.K.E. Magnusson, N.G. Martin, G.W. Montgomery, K.E. North, N.L. Pedersen, T.D. Spector, E.K. Speliotes, M.E. Goddard, J. Yang, P.M. Visscher, Nature Genetics 47 (2015) 1357–1362.
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2015 | Conference Paper | IST-REx-ID: 776
The SprayList: A scalable relaxed priority queue
D.-A. Alistarh, J. Kopinsky, J. Li, N. Shavit, in:, ACM, 2015, pp. 11–20.
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2015 | Journal Article | IST-REx-ID: 7765
The principle of independent bond-level response: Tuning by pruning to exploit disorder for global behavior
C.P. Goodrich, A.J. Liu, S.R. Nagel, Physical Review Letters 114 (2015).
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2015 | Journal Article | IST-REx-ID: 7766
Disordered surface vibrations in jammed sphere packings
D.M. Sussman, C.P. Goodrich, A.J. Liu, S.R. Nagel, Soft Matter 11 (2015) 2745–2751.
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2015 | Journal Article | IST-REx-ID: 7767
Collective dynamics of soft active particles
R. van Drongelen, A. Pal, C.P. Goodrich, T. Idema, Physical Review E 91 (2015).
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2015 | Conference Paper | IST-REx-ID: 777
Streaming min-max hypergraph partitioning
D.-A. Alistarh, J. Iglesias, M. Vojnović, in:, Neural Information Processing Systems, 2015, pp. 1900–1908.
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2015 | Preprint | IST-REx-ID: 7779 | OA View | Download Preprint (ext.) | arXiv
 

2015 | Conference Paper | IST-REx-ID: 778 | OA
Inherent limitations of hybrid transactional memory
D.-A. Alistarh, J. Kopinsky, P. Kuznetsov, S. Ravi, N. Shavit, in:, Springer, 2015, pp. 185–199.
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2015 | Conference Paper | IST-REx-ID: 779
ThreadScan: Automatic and scalable memory reclamation
D.-A. Alistarh, A. Matveev, W. Leiserson, N. Shavit, in:, ACM, 2015, pp. 123–132.
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2015 | Preprint | IST-REx-ID: 8183 | OA
Eliminating higher-multiplicity intersections, III. Codimension 2
S. Avvakumov, I. Mabillard, A. Skopenkov, U. Wagner, ArXiv (n.d.).
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2015 | Journal Article | IST-REx-ID: 8242
Generation of recombinant FcεRIα of dog, cat and horse for component-resolved allergy diagnosis in veterinary patients
L. Einhorn, J. Singer, M. Muhr, A. Schoos, K. Oida, J. Singer, L. Panakova, K. Manzano-Szalai, E. Jensen-Jarolim, Journal of Allergy and Clinical Immunology 135 (2015).
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2015 | Journal Article | IST-REx-ID: 1602 | OA
Faster algorithms for algebraic path properties in recursive state machines with constant treewidth
K. Chatterjee, R. Ibsen-Jensen, A. Pavlogiannis, P. Goyal, ACM SIGPLAN Notices 50 (2015) 97–109.
View | Files available | DOI | Download Preprint (ext.) | arXiv
 

2015 | Journal Article | IST-REx-ID: 1604
Quantitative interprocedural analysis
K. Chatterjee, A. Pavlogiannis, Y. Velner, Proceedings of the 42nd Annual ACM SIGPLAN-SIGACT 50 (2015) 539–551.
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2015 | Conference Paper | IST-REx-ID: 1607 | OA
Faster algorithms for quantitative verification in constant treewidth graphs
K. Chatterjee, R. Ibsen-Jensen, A. Pavlogiannis, in:, Springer, 2015, pp. 140–157.
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2015 | Conference Paper | IST-REx-ID: 1714
A framework for automated competitive analysis of on-line scheduling of firm-deadline tasks
K. Chatterjee, A. Pavlogiannis, A. Kößler, U. Schmid, in:, Real-Time Systems Symposium, IEEE, 2015, pp. 118–127.
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2015 | Journal Article | IST-REx-ID: 832
Real time analysis of lateral root organogenesis in arabidopsis
P. Marhavý, E. Benková, Bio-Protocol 5 (2015).
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2015 | Journal Article | IST-REx-ID: 8456
Observing the overall rocking motion of a protein in a crystal
P. Ma, Y. Xue, N. Coquelle, J.D. Haller, T. Yuwen, I. Ayala, O. Mikhailovskii, D. Willbold, J.-P. Colletier, N.R. Skrynnikov, P. Schanda, Nature Communications 6 (2015).
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2015 | Journal Article | IST-REx-ID: 8457 View | DOI
 

2015 | Journal Article | IST-REx-ID: 848
A model of substitution trajectories in sequence space and long-term protein evolution
D. Usmanova, L. Ferretti, I. Povolotskaya, P. Vlasov, F. Kondrashov, Molecular Biology and Evolution 32 (2015) 542–554.
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2015 | Journal Article | IST-REx-ID: 8495
A note on micro-instability for Hamiltonian systems close to integrable
A. Bounemoura, V. Kaloshin, Proceedings of the American Mathematical Society 144 (2015) 1553–1560.
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2015 | Journal Article | IST-REx-ID: 8498
Arnold diffusion for smooth convex systems of two and a half degrees of freedom
V. Kaloshin, K. Zhang, Nonlinearity 28 (2015) 2699–2720.
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2015 | Journal Article | IST-REx-ID: 8499
Growth of Sobolev norms in the cubic defocusing nonlinear Schrödinger equation
M. Guardia, V. Kaloshin, Journal of the European Mathematical Society 17 (2015) 71–149.
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2015 | Journal Article | IST-REx-ID: 981 | OA
Dirac mass generation from crystal symmetry breaking on the surfaces of topological crystalline insulators
I. Zeljkovic, Y. Okada, M. Serbyn, R. Sankar, D. Walkup, W. Zhou, J. Liu, G. Chang, Y. Wang, M. Hasan, F. Chou, H. Lin, A. Bansil, L. Fu, V. Madhavan, Nature Materials 14 (2015) 318–324.
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2015 | Journal Article | IST-REx-ID: 982 | OA
Criterion for many-body localization-delocalization phase transition
M. Serbyn, Z. Papić, D. Abanin, Physical Review X 5 (2015).
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