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358 Publications


2015 | Journal Article | IST-REx-ID: 1562
Auxin-binding pocket of ABP1 is crucial for its gain-of-function cellular and developmental roles
P. Grones, X. Chen, S. Simon, W. Kaufmann, R. De Rycke, T. Nodzyński, E. Zažímalová, J. Friml, Journal of Experimental Botany 66 (2015) 5055–5065.
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2015 | Conference Paper | IST-REx-ID: 1567
Shape, homology, persistence, and stability
H. Edelsbrunner, 9411 (2015).
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2015 | Journal Article | IST-REx-ID: 1517   OA
From large deviations to Wasserstein gradient flows in multiple dimensions
M. Erbar, J. Maas, M. Renger, Electronic Communications in Probability 20 (2015).
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2015 | Journal Article | IST-REx-ID: 1531
Visualizing symmetric indefinite 2D tensor fields using The Heat Kernel Signature
V. Zobel, J. Reininghaus, I. Hotz, Mathematics and Visualization 40 (2015) 257–267.
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2015 | Journal Article | IST-REx-ID: 1536
Asymmetric localizations of the ABC transporter PaPDR1 trace paths of directional strigolactone transport
J. Sasse, S. Simon, C. Gübeli, G. Liu, X. Cheng, J. Friml, H. Bouwmeester, E. Martinoia, L. Borghi, Current Biology 25 (2015) 647–655.
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2015 | Journal Article | IST-REx-ID: 1574   OA
A coherent transcriptional feed-forward motif model for mediating auxin-sensitive PIN3 expression during lateral root development
Q. Chen, Y. Liu, S. Maere, E. Lee, G. Van Isterdael, Z. Xie, W. Xuan, J. Lucas, V. Vassileva, S. Kitakura, P. Marhavy, K.T. Wabnik, N. Geldner, E. Benková, J. Le, H. Fukaki, E. Grotewold, C. Li, J. Friml, F. Sack, T. Beeckman, S. Vanneste, Nature Communications 6 (2015).
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2015 | Journal Article | IST-REx-ID: 1593   OA
Strategies of seedlings to overcome their sessile nature: Auxin in mobility control
P. Žádníková, D. Smet, Q. Zhu, D. Van Der Straeten, E. Benková, Frontiers in Plant Science 6 (2015).
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2015 | Journal Article | IST-REx-ID: 1579   OA
Galois groups of Schubert problems of lines are at least alternating
C. Brooks, A. Martin Del Campo Sanchez, F. Sottile, Transactions of the American Mathematical Society 367 (2015) 4183–4206.
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2015 | Journal Article | IST-REx-ID: 1581
Gradients are shaping up
M.T. Bollenbach, C.-P.J. Heisenberg, Cell 161 (2015) 431–432.
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2015 | Journal Article | IST-REx-ID: 1586
Metabolic engineering of cyanobacteria for the synthesis of commodity products
A. Angermayr, A. Gorchs, K. Hellingwerf, Trends in Biotechnology 33 (2015) 352–361.
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2015 | Conference Paper | IST-REx-ID: 1649   OA
Efficient zero-knowledge proofs for commitments from learning with errors over rings
F. Benhamouda, S. Krenn, V. Lyubashevsky, K.Z. Pietrzak, 9326 (2015) 305–325.
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2015 | Conference Paper | IST-REx-ID: 1651
Anonymous transferable e-cash
F. Baldimtsi, M. Chase, G. Fuchsbauer, M. Kohlweiss, in:, Springer, 2015, pp. 101–124.
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2015 | Conference Paper | IST-REx-ID: 1644   OA
Query-complexity amplification for random oracles
G. Demay, P. Gazi, U. Maurer, B. Tackmann, in:, Springer, 2015, pp. 159–180.
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2015 | Journal Article | IST-REx-ID: 1618   OA
Solution structure of CCL19 and identification of overlapping CCR7 and PSGL-1 binding sites
C. Veldkamp, E. Kiermaier, S. Gabel Eissens, M. Gillitzer, D. Lippner, F. Disilvio, C. Mueller, P. Wantuch, G. Chaffee, M. Famiglietti, D. Zgoba, A. Bailey, Y. Bah, S. Engebretson, D. Graupner, E. Lackner, V. Larosa, T. Medeiros, M. Olson, A. Phillips, H. Pyles, A. Richard, S. Schoeller, B. Touzeau, L. Williams, M.K. Sixt, F. Peterson, Biochemistry 54 (2015) 4163–4166.
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2015 | Conference Paper | IST-REx-ID: 1625
Detailed spatio-temporal reconstruction of eyelids
A. Bermano, T. Beeler, Y. Kozlov, D. Bradley, B. Bickel, M. Gross, in:, ACM, 2015.
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2015 | Conference Paper | IST-REx-ID: 1632   OA
A stream function solver for liquid simulations
R. Ando, N. Thuerey, C.J. Wojtan, in:, ACM, 2015.
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2015 | Journal Article | IST-REx-ID: 1699   OA
Adaptive gene introgression after secondary contact
H. Uecker, D. Setter, J. Hermisson, Journal of Mathematical Biology 70 (2015) 1523–1580.
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2015 | Journal Article | IST-REx-ID: 1682   OA
Robust satisfiability of systems of equations
P. Franek, M. Krcál, Journal of the ACM 62 (2015).
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2015 | Journal Article | IST-REx-ID: 1687   OA
Navigating in tissue mazes: Chemoattractant interpretation in complex environments
M. Sarris, M.K. Sixt, Current Opinion in Cell Biology 36 (2015) 93–102.
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2015 | Conference Paper | IST-REx-ID: 1668   OA
Relaxing full-codebook security: A refined analysis of key-length extension schemes
P. Gazi, J. Lee, Y. Seurin, J. Steinberger, S. Tessaro, 9054 (2015) 319–341.
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2015 | Journal Article | IST-REx-ID: 1663
Complex regulation of CREB-binding protein by homeodomain-interacting protein kinase 2
K. Kovács, M. Steinmann, O. Halfon, P. Magistretti, J. Cardinaux, Cellular Signalling 27 (2015) 2252–2260.
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2015 | Journal Article | IST-REx-ID: 1788
Strong opto-electro-mechanical coupling in a silicon photonic crystal cavity
A. Pitanti, J.M. Fink, A. Safavi Naeini, J. Hill, C. Lei, A. Tredicucci, O. Painter, Optics Express 23 (2015) 3196–3208.
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2015 | Journal Article | IST-REx-ID: 1827   OA
Evolution of bow-tie architectures in biology
T. Friedlander, A. Mayo, T. Tlusty, U. Alon, PLoS Computational Biology 11 (2015).
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2015 | Journal Article | IST-REx-ID: 1834   OA View | Files available | DOI
 

2015 | Journal Article | IST-REx-ID: 1803
Basolateral amygdala bidirectionally modulates stress induced hippocampal learning and memory deficits through a p25/Cdk5-dependent pathway
D. Rei, X. Mason, J. Seo, J. Gräff, A. Rudenko, J. Wang, R. Rueda, S. Siegert, S. Cho, R. Canter, A. Mungenast, K. Deisseroth, L. Tsai, PNAS 112 (2015) 7291–7296.
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2015 | Journal Article | IST-REx-ID: 1808
Guest editors' introduction to special issue on computational methods in systems biology
A. Gupta, T.A. Henzinger, ACM Transactions on Modeling and Computer Simulation 25 (2015).
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2015 | Journal Article | IST-REx-ID: 1841   OA
A new look at reweighted message passing
V. Kolmogorov, IEEE Transactions on Pattern Analysis and Machine Intelligence 37 (2015) 919–930.
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2015 | Conference Paper | IST-REx-ID: 1992   OA
Succinct representation of concurrent trace sets
A. Gupta, T.A. Henzinger, A. Radhakrishna, R. Samanta, T. Tarrach, in:, ACM, 2015, pp. 433–444.
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2015 | Journal Article | IST-REx-ID: 1997   OA
The three-state toric homogeneous Markov chain model has Markov degree two
P. Noren, Journal of Symbolic Computation 68/Part 2 (2015) 285–296.
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2015 | Conference Paper | IST-REx-ID: 1858   OA View | DOI | Download (ext.) | arXiv
 

2015 | Conference Paper | IST-REx-ID: 1860   OA
Classifier adaptation at prediction time
A. Royer, C. Lampert, in:, IEEE, 2015, pp. 1401–1409.
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2015 | Journal Article | IST-REx-ID: 1865
Plant embryogenesis requires AUX/LAX-mediated auxin influx
H. Robert, W. Grunewald, M. Sauer, B. Cannoot, M. Soriano, R. Swarup, D. Weijers, M. Bennett, K. Boutilier, J. Friml, Development 142 (2015) 702–711.
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2015 | Journal Article | IST-REx-ID: 2008   OA
Iterative scaling in curved exponential families
A. Klimova, T. Rudas, Scandinavian Journal of Statistics 42 (2015) 832–847.
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2015 | Journal Article | IST-REx-ID: 2166   OA
The Altshuler-Shklovskii formulas for random band matrices I: the unimodular case
L. Erdös, A. Knowles, Communications in Mathematical Physics 333 (2015) 1365–1416.
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2015 | Conference Paper | IST-REx-ID: 1675
Proofs of space
S. Dziembowski, S. Faust, V. Kolmogorov, K.Z. Pietrzak, 9216 (2015) 585–605.
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2015 | Journal Article | IST-REx-ID: 260
Erratum Rational points on intersections of cubic and quadric hypersurfaces
T.D. Browning, R. Dietmann, R. Heath Brown, Journal of the Institute of Mathematics of Jussieu 14 (2015).
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2015 | Book Chapter | IST-REx-ID: 258
A survey of applications of the circle method to rational points
T.D. Browning, in:, Arithmetic and Geometry, Cambridge University Press, 2015, pp. 89–113.
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2015 | Journal Article | IST-REx-ID: 361
Cu2ZnSnS4–PtM (M = Co, Ni) nanoheterostructures for photocatalytic hydrogen evolution
X. Yu, X. An, A. Genç, M. Ibanez, J. Arbiol, Y. Zhang, A. Cabot, Journal of Physical Chemistry C 119 (2015) 21882–21888.
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2015 | Journal Article | IST-REx-ID: 354
Electron doping in bottom up engineered thermoelectric nanomaterials through HCl mediated ligand displacement
M. Ibanez, R. Korkosz, Z. Luo, P. Riba, D. Cadavid, S. Ortega, A. Cabot, M. Kanatzidis, Journal of the American Chemical Society 137 (2015) 4046–4049.
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2015 | Journal Article | IST-REx-ID: 532
EIN2-directed translational regulation of ethylene signaling in arabidopsis
W. Li, M. Ma, Y. Feng, H. Li, Y. Wang, Y. Ma, M. Li, F. An, H. Guo, Cell 163 (2015) 670–683.
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2015 | Technical Report | IST-REx-ID: 5444   OA
Reconstructing robust phylogenies of metastatic cancers
J. Reiter, A. Makohon-Moore, J. Gerold, I. Bozic, K. Chatterjee, C. Iacobuzio-Donahue, B. Vogelstein, M. Nowak, Reconstructing Robust Phylogenies of Metastatic Cancers, IST Austria, 2015.
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2015 | Technical Report | IST-REx-ID: 5432
The complexity of evolutionary games on graphs
K. Chatterjee, R. Ibsen-Jensen, M. Nowak, The Complexity of Evolutionary Games on Graphs, IST Austria, 2015.
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2015 | Journal Article | IST-REx-ID: 594
Structural basis of transcription initiation by RNA polymerase II
S. Sainsbury, C.A. Bernecky, P. Cramer, Nature Reviews Molecular Cell Biology 16 (2015) 129–143.
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2015 | Journal Article | IST-REx-ID: 6118   OA
Environmental CO2 inhibits Caenorhabditis elegans egg-laying by modulating olfactory neurons and evokes widespread changes in neural activity
L.A. Fenk, M. de Bono, Proceedings of the National Academy of Sciences 112 (2015) E3525–E3534.
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2015 | Journal Article | IST-REx-ID: 6120   OA
Decoding a neural circuit controlling global animal state in C. elegans
P. Laurent, Z. Soltesz, G.M. Nelson, C. Chen, F. Arellano-Carbajal, E. Levy, M. de Bono, ELife 4 (2015).
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2015 | Conference Paper | IST-REx-ID: 1637
The complexity of general-valued CSPs
V. Kolmogorov, A. Krokhin, M. Rolinek, in:, IEEE, 2015, pp. 1246–1258.
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2015 | Conference Paper | IST-REx-ID: 777
Streaming min-max hypergraph partitioning
D. Alistarh, J. Iglesias, M. Vojnović, in:, Neural Information Processing Systems, 2015, pp. 1900–1908.
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2015 | Journal Article | IST-REx-ID: 866
Massively parallel enzyme kinetics reveals the substrate recognition landscape of the metalloprotease ADAMTS13
C. Kretz, M. Dai, O. Soylemez, A. Yee, K. Desch, D. Siemieniak, K. Tomberg, F. Kondrashov, F. Meng, D. Ginsburg, PNAS 112 (2015) 9328–9333.
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2015 | Conference Paper | IST-REx-ID: 784
A high-radix, low-latency optical switch for data centers
D.-A. Alistarh, H. Ballani, P. Costa, A. Funnell, J. Benjamin, P. Watts, B. Thomsen, in:, ACM, 2015, pp. 367–368.
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2015 | Journal Article | IST-REx-ID: 924
Dynamic model of heat and mass transfer in an unsaturated porous wick of capillary pumped loop
R. Boubaker, V. Platel, A. Bergès, M. Bancelin, E. Hannezo, Applied Thermal Engineering 76 (2015) 1–8.
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