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365 Publications


2015 | Journal Article | IST-REx-ID: 1611 | OA
Construction of a robust and sensitive arginine biosensor through ancestral protein reconstruction
J. Whitfield, W. Zhang, M. Herde, B. Clifton, J. Radziejewski, H.L. Janovjak, C. Henneberger, C. Jackson, Protein Science 24 (2015) 1412–1422.
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2015 | Journal Article | IST-REx-ID: 1614 | OA View | Files available | DOI | PubMed | Europe PMC
 

2015 | Journal Article | IST-REx-ID: 1615 | OA
Perturbed hippocampal synaptic inhibition and γ-oscillations in a neuroligin-4 knockout mouse model of autism
M. Hammer, D. Krueger Burg, L. Tuffy, B. Cooper, H. Taschenberger, S. Goswami, H. Ehrenreich, P.M. Jonas, F. Varoqueaux, J. Rhee, N. Brose, Cell Reports 13 (2015) 516–523.
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2015 | Journal Article | IST-REx-ID: 1618 | OA
Solution structure of CCL19 and identification of overlapping CCR7 and PSGL-1 binding sites
C. Veldkamp, E. Kiermaier, S. Gabel Eissens, M. Gillitzer, D. Lippner, F. Disilvio, C. Mueller, P. Wantuch, G. Chaffee, M. Famiglietti, D. Zgoba, A. Bailey, Y. Bah, S. Engebretson, D. Graupner, E. Lackner, V. Larosa, T. Medeiros, M. Olson, A. Phillips, H. Pyles, A. Richard, S. Schoeller, B. Touzeau, L. Williams, M.K. Sixt, F. Peterson, Biochemistry 54 (2015) 4163–4166.
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2015 | Conference Paper | IST-REx-ID: 1633 | OA View | Files available | DOI
 

2015 | Conference Paper | IST-REx-ID: 1634 | OA View | Files available | DOI
 

2015 | Conference Paper | IST-REx-ID: 1636 | OA
Effectiveness of structural restrictions for hybrid CSPs
V. Kolmogorov, M. Rolinek, R. Takhanov, 9472 (2015) 566–577.
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2015 | Conference Paper | IST-REx-ID: 1689 | OA
Temporal logic control for stochastic linear systems using abstraction refinement of probabilistic games
M. Svoreňová, J. Kretinsky, M. Chmelik, K. Chatterjee, I. Cěrná, C. Belta, in:, Proceedings of the 18th International Conference on Hybrid Systems: Computation and Control, ACM, 2015, pp. 259–268.
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2015 | Conference Paper | IST-REx-ID: 1691
Temporal logic motion planning using POMDPs with parity objectives: Case study paper
M. Svoreňová, M. Chmelik, K. Leahy, H. Eniser, K. Chatterjee, I. Cěrná, C. Belta, in:, Proceedings of the 18th International Conference on Hybrid Systems: Computation and Control, ACM, 2015, pp. 233–238.
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2015 | Conference Paper | IST-REx-ID: 1692
Eliminating spurious transitions in reachability with support functions
G. Frehse, S. Bogomolov, M. Greitschus, T. Strump, A. Podelski, in:, Proceedings of the 18th International Conference on Hybrid Systems: Computation and Control, ACM, 2015, pp. 149–158.
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2015 | Journal Article | IST-REx-ID: 1693 | OA
Quantum interference effects in laser spectroscopy of muonic hydrogen, deuterium, and helium-3
P. Amaro, B. Franke, J. Krauth, M. Diepold, F. Fratini, L. Safari, J. Machado, A. Antognini, F. Kottmann, P. Indelicato, R. Pohl, J. Santos, Physical Review A 92 (2015).
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2015 | Journal Article | IST-REx-ID: 1694
Quantitative temporal simulation and refinement distances for timed systems
K. Chatterjee, V. Prabhu, IEEE Transactions on Automatic Control 60 (2015) 2291–2306.
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2015 | Journal Article | IST-REx-ID: 1695 | OA
Evaluation techniques for Gutzwiller wave functions in finite dimensions
J. Kaczmarczyk, T. Schickling, J. Bünemann, Physica Status Solidi (B): Basic Solid State Physics 252 (2015) 2059–2071.
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2015 | Journal Article | IST-REx-ID: 1696 | OA View | DOI | Download Preprint (ext.)
 

2015 | Journal Article | IST-REx-ID: 1697 | OA
High accuracy decoding of dynamical motion from a large retinal population
O. Marre, V. Botella Soler, K. Simmons, T. Mora, G. Tkačik, M. Berry, PLoS Computational Biology 11 (2015).
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2015 | Journal Article | IST-REx-ID: 1698 | OA
The complexity of multi-mean-payoff and multi-energy games
Y. Velner, K. Chatterjee, L. Doyen, T.A. Henzinger, A. Rabinovich, J. Raskin, Information and Computation 241 (2015) 177–196.
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2015 | Journal Article | IST-REx-ID: 1699 | OA
Adaptive gene introgression after secondary contact
H. Uecker, D. Setter, J. Hermisson, Journal of Mathematical Biology 70 (2015) 1523–1580.
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2015 | Journal Article | IST-REx-ID: 1700 | OA
Ultralong-range order in the Fermi-Hubbard model with long-range interactions
E. Van Loon, M. Katsnelson, M. Lemeshko, Physical Review B 92 (2015).
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2015 | Journal Article | IST-REx-ID: 1701 | OA
Thermodynamics and signatures of criticality in a network of neurons
G. Tkacik, T. Mora, O. Marre, D. Amodei, S. Palmer, M. Berry Ii, W. Bialek, PNAS 112 (2015) 11508–11513.
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2015 | Journal Article | IST-REx-ID: 1703 View | DOI
 

2015 | Journal Article | IST-REx-ID: 1704 | OA
Note on a family of monotone quantum relative entropies
A. Deuchert, C. Hainzl, R. Seiringer, Letters in Mathematical Physics 105 (2015) 1449–1466.
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2015 | Conference Paper | IST-REx-ID: 1706 | OA
Multi-task and lifelong learning of kernels
A. Pentina, S. Ben David, in:, Springer, 2015, pp. 194–208.
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2015 | Journal Article | IST-REx-ID: 1678 | OA
Light-assisted small-molecule screening against protein kinases
Á. Inglés Prieto, E. Gschaider-Reichhart, M. Muellner, M. Nowak, S. Nijman, M. Grusch, H.L. Janovjak, Nature Chemical Biology 11 (2015) 952–954.
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2015 | Journal Article | IST-REx-ID: 1679 | OA
Taylor's Forest
G.M. Lemoult, P. Maier, B. Hof, Physics of Fluids 27 (2015).
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2015 | Journal Article | IST-REx-ID: 1681 | OA
Evolution of decisions in population games with sequentially searching individuals
T. Priklopil, K. Chatterjee, Games 6 (2015) 413–437.
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2015 | Journal Article | IST-REx-ID: 1682 | OA
Robust satisfiability of systems of equations
P. Franek, M. Krcál, Journal of the ACM 62 (2015).
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2015 | Journal Article | IST-REx-ID: 1683
Gaining mass: The structure of respiratory complex I-from bacterial towards mitochondrial versions
J.A. Letts, L.A. Sazanov, Current Opinion in Structural Biology 33 (2015) 135–145.
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2015 | Conference Paper | IST-REx-ID: 1685 | OA
A fixed parameter tractable approximation scheme for the optimal cut graph of a surface
V. Cohen Addad, A.N. De Mesmay, in:, Springer, 2015, pp. 386–398.
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2015 | Journal Article | IST-REx-ID: 1686 View | DOI
 

2015 | Journal Article | IST-REx-ID: 1687 | OA
Navigating in tissue mazes: Chemoattractant interpretation in complex environments
M. Sarris, M.K. Sixt, Current Opinion in Cell Biology 36 (2015) 93–102.
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2015 | Journal Article | IST-REx-ID: 1688 | OA
Bounds for Pach's selection theorem and for the minimum solid angle in a simplex
R. Karasev, J. Kynčl, P. Paták, Z. Patakova, M. Tancer, Discrete & Computational Geometry 54 (2015) 610–636.
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2015 | Journal Article | IST-REx-ID: 1709 | OA
Biological auctions with multiple rewards
J. Reiter, A. Kanodia, R. Gupta, M. Nowak, K. Chatterjee, Proceedings of the Royal Society of London Series B Biological Sciences 282 (2015).
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2015 | Journal Article | IST-REx-ID: 1710 | OA
Minimal resistance of curves under the single impact assumption
A. Akopyan, A. Plakhov, Society for Industrial and Applied Mathematics 47 (2015) 2754–2769.
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2015 | Journal Article | IST-REx-ID: 1712 | OA
Drosophila immune cell migration and adhesion during embryonic development and larval immune responses
A. Ratheesh, V. Belyaeva, D.E. Siekhaus, Current Opinion in Cell Biology 36 (2015) 71–79.
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2015 | Conference Paper | IST-REx-ID: 1714
A framework for automated competitive analysis of on-line scheduling of firm-deadline tasks
K. Chatterjee, A. Pavlogiannis, A. Kößler, U. Schmid, in:, Real-Time Systems Symposium, IEEE, 2015, pp. 118–127.
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2015 | Journal Article | IST-REx-ID: 1845 | OA
Excitement about inhibitory presynaptic terminals
D.H. Vandael, C.M. Espinoza Martinez, P.M. Jonas, Neuron 85 (2015) 1149–1151.
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2015 | Journal Article | IST-REx-ID: 1846 | OA
Refinement checking on parametric modal transition systems
N. Beneš, J. Kretinsky, K. Larsen, M. Möller, S. Sickert, J. Srba, Acta Informatica 52 (2015) 269–297.
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2015 | Journal Article | IST-REx-ID: 1847
ABP1: Finally docking
P. Grones, J. Friml, Molecular Plant 8 (2015) 356–358.
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2015 | Journal Article | IST-REx-ID: 1848 | OA
FAM96A is a novel pro-apoptotic tumor suppressor in gastrointestinal stromal tumors
B. Schwamb, R. Pick, S. Fernández, K. Völp, J. Heering, V. Dötsch, S. Bösser, J. Jung, R. Beinoravičiute Kellner, J. Wesely, I. Zörnig, M. Hammerschmidt, M. Nowak, R. Penzel, K. Zatloukal, S. Joos, R. Rieker, A. Agaimy, S. Söder, K. Reid Lombardo, M. Kendrick, M. Bardsley, Y. Hayashi, D. Asuzu, S. Syed, T. Ördög, M. Zörnig, International Journal of Cancer 137 (2015) 1318–1329.
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2015 | Journal Article | IST-REx-ID: 1849
Calcium is an organizer of cell polarity in plants
E. Himschoot, T. Beeckman, J. Friml, S. Vanneste, Biochimica et Biophysica Acta - Molecular Cell Research 1853 (2015) 2168–2172.
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2015 | Journal Article | IST-REx-ID: 1850 | OA View | Files available | DOI
 

2015 | Journal Article | IST-REx-ID: 1851 | OA View | Files available | DOI
 

2015 | Journal Article | IST-REx-ID: 1855 | OA
A sting in the spit: Widespread cross-infection of multiple RNA viruses across wild and managed bees
D. Mcmahon, M. Fürst, J. Caspar, P. Theodorou, M. Brown, R. Paxton, Journal of Animal Ecology 84 (2015) 615–624.
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2015 | Conference Paper | IST-REx-ID: 1835 | OA
Model checking gene regulatory networks
M. Giacobbe, C.C. Guet, A. Gupta, T.A. Henzinger, T. Paixao, T. Petrov, 9035 (2015) 469–483.
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2015 | Conference Paper | IST-REx-ID: 1836
Segment abstraction for worst-case execution time analysis
P. Cerny, T.A. Henzinger, L. Kovács, A. Radhakrishna, J. Zwirchmayr, 9032 (2015) 105–131.
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2015 | Journal Article | IST-REx-ID: 1837 | OA
Subcritical versus supercritical transition to turbulence in curved pipes
J. Kühnen, P. Braunshier, M. Schwegel, H. Kuhlmann, B. Hof, Journal of Fluid Mechanics 770 (2015) R3.
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2015 | Conference Paper | IST-REx-ID: 1838 | OA
Assume-guarantee synthesis for concurrent reactive programs with partial information
R. Bloem, K. Chatterjee, S. Jacobs, R. Könighofer, in:, Springer, 2015, pp. 517–532.
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2015 | Journal Article | IST-REx-ID: 1840 | OA
Optimal Kullback-Leibler aggregation via information bottleneck
B. Geiger, T. Petrov, G. Kubin, H. Koeppl, IEEE Transactions on Automatic Control 60 (2015) 1010–1022.
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2015 | Journal Article | IST-REx-ID: 1841 | OA
A new look at reweighted message passing
V. Kolmogorov, IEEE Transactions on Pattern Analysis and Machine Intelligence 37 (2015) 919–930.
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2015 | Journal Article | IST-REx-ID: 1834 | OA View | Files available | DOI
 

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