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374 Publications
2015 | Journal Article | IST-REx-ID: 1712 |

Drosophila immune cell migration and adhesion during embryonic development and larval immune responses
A. Ratheesh, V. Belyaeva, D.E. Siekhaus, Current Opinion in Cell Biology 36 (2015) 71–79.
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A. Ratheesh, V. Belyaeva, D.E. Siekhaus, Current Opinion in Cell Biology 36 (2015) 71–79.
2015 | Conference Paper | IST-REx-ID: 1714
A framework for automated competitive analysis of on-line scheduling of firm-deadline tasks
K. Chatterjee, A. Pavlogiannis, A. Kößler, U. Schmid, in:, Real-Time Systems Symposium, IEEE, 2015, pp. 118–127.
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K. Chatterjee, A. Pavlogiannis, A. Kößler, U. Schmid, in:, Real-Time Systems Symposium, IEEE, 2015, pp. 118–127.
2015 | Journal Article | IST-REx-ID: 1728
Ptch1 and Gli regulate Shh signalling dynamics via multiple mechanisms
M. Cohen, A. Kicheva, A. Ribeiro, R. Blassberg, K. Page, C. Barnes, J. Briscoe, Nature Communications 6 (2015).
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| DOI
M. Cohen, A. Kicheva, A. Ribeiro, R. Blassberg, K. Page, C. Barnes, J. Briscoe, Nature Communications 6 (2015).
2015 | Journal Article | IST-REx-ID: 1730 |

Discrete systolic inequalities and decompositions of triangulated surfaces
É. Colin De Verdière, A. Hubard, A.N. de Mesmay, Discrete & Computational Geometry 53 (2015) 587–620.
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É. Colin De Verdière, A. Hubard, A.N. de Mesmay, Discrete & Computational Geometry 53 (2015) 587–620.
2015 | Journal Article | IST-REx-ID: 1731 |

Randomness for free
K. Chatterjee, L. Doyen, H. Gimbert, T.A. Henzinger, Information and Computation 245 (2015) 3–16.
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K. Chatterjee, L. Doyen, H. Gimbert, T.A. Henzinger, Information and Computation 245 (2015) 3–16.
2015 | Conference Paper | IST-REx-ID: 1732 |

Qualitative analysis of POMDPs with temporal logic specifications for robotics applications
K. Chatterjee, M. Chmelik, R. Gupta, A. Kanodia, in:, IEEE, 2015, pp. 325–330.
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K. Chatterjee, M. Chmelik, R. Gupta, A. Kanodia, in:, IEEE, 2015, pp. 325–330.
2015 | Journal Article | IST-REx-ID: 1734
Recent advances in facial appearance capture
O. Klehm, F. Rousselle, M. Papas, D. Bradley, C. Hery, B. Bickel, W. Jarosz, T. Beeler, Computer Graphics Forum 34 (2015) 709–733.
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O. Klehm, F. Rousselle, M. Papas, D. Bradley, C. Hery, B. Bickel, W. Jarosz, T. Beeler, Computer Graphics Forum 34 (2015) 709–733.
2015 | Journal Article | IST-REx-ID: 1735 |

A dimension-reduced pressure solver for liquid simulations
R. Ando, N. Thürey, C.J. Wojtan, Computer Graphics Forum 34 (2015) 473–480.
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R. Ando, N. Thürey, C.J. Wojtan, Computer Graphics Forum 34 (2015) 473–480.
2015 | Journal Article | IST-REx-ID: 1788
Strong opto-electro-mechanical coupling in a silicon photonic crystal cavity
A. Pitanti, J.M. Fink, A. Safavi Naeini, J. Hill, C. Lei, A. Tredicucci, O. Painter, Optics Express 23 (2015) 3196–3208.
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A. Pitanti, J.M. Fink, A. Safavi Naeini, J. Hill, C. Lei, A. Tredicucci, O. Painter, Optics Express 23 (2015) 3196–3208.
2015 | Journal Article | IST-REx-ID: 1789 |

Loss-of-function variants of SETD5 cause intellectual disability and the core phenotype of microdeletion 3p25.3 syndrome
A. Kuechler, A. Zink, T. Wieland, H. Lüdecke, K. Cremer, L. Salviati, P. Magini, K. Najafi, C. Zweier, J. Czeschik, S. Aretz, S. Endele, F. Tamburrino, C. Pinato, M. Clementi, J. Gundlach, C. Maylahn, L. Mazzanti, E. Wohlleber, T. Schwarzmayr, R. Kariminejad, A. Schlessinger, D. Wieczorek, T. Strom, G. Novarino, H. Engels, European Journal of Human Genetics 23 (2015) 753–760.
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| PubMed | Europe PMC
A. Kuechler, A. Zink, T. Wieland, H. Lüdecke, K. Cremer, L. Salviati, P. Magini, K. Najafi, C. Zweier, J. Czeschik, S. Aretz, S. Endele, F. Tamburrino, C. Pinato, M. Clementi, J. Gundlach, C. Maylahn, L. Mazzanti, E. Wohlleber, T. Schwarzmayr, R. Kariminejad, A. Schlessinger, D. Wieczorek, T. Strom, G. Novarino, H. Engels, European Journal of Human Genetics 23 (2015) 753–760.
2015 | Journal Article | IST-REx-ID: 1792
A Koksma-Hlawka inequality for general discrepancy systems
F. Pausinger, A. Svane, Journal of Complexity 31 (2015) 773–797.
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F. Pausinger, A. Svane, Journal of Complexity 31 (2015) 773–797.
2015 | Journal Article | IST-REx-ID: 1793 |

DynamicRoots: A software platform for the reconstruction and analysis of growing plant roots
O. Symonova, C. Topp, H. Edelsbrunner, PLoS One 10 (2015).
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O. Symonova, C. Topp, H. Edelsbrunner, PLoS One 10 (2015).
2015 | Journal Article | IST-REx-ID: 1802
The schizophrenia risk gene product miR-137 alters presynaptic plasticity
S. Siegert, J. Seo, E. Kwon, A. Rudenko, S. Cho, W. Wang, Z. Flood, A. Martorell, M. Ericsson, A. Mungenast, L. Tsai, Nature Neuroscience 18 (2015) 1008–1016.
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S. Siegert, J. Seo, E. Kwon, A. Rudenko, S. Cho, W. Wang, Z. Flood, A. Martorell, M. Ericsson, A. Mungenast, L. Tsai, Nature Neuroscience 18 (2015) 1008–1016.
2015 | Journal Article | IST-REx-ID: 1803
Basolateral amygdala bidirectionally modulates stress induced hippocampal learning and memory deficits through a p25/Cdk5-dependent pathway
D. Rei, X. Mason, J. Seo, J. Gräff, A. Rudenko, J. Wang, R. Rueda, S. Siegert, S. Cho, R. Canter, A. Mungenast, K. Deisseroth, L. Tsai, PNAS 112 (2015) 7291–7296.
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D. Rei, X. Mason, J. Seo, J. Gräff, A. Rudenko, J. Wang, R. Rueda, S. Siegert, S. Cho, R. Canter, A. Mungenast, K. Deisseroth, L. Tsai, PNAS 112 (2015) 7291–7296.
2015 | Journal Article | IST-REx-ID: 1804 |

Transition to turbulence in Taylor-Couette ferrofluidic flow
S. Altmeyer, Y. Do, Y. Lai, Scientific Reports 5 (2015).
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S. Altmeyer, Y. Do, Y. Lai, Scientific Reports 5 (2015).
2015 | Journal Article | IST-REx-ID: 1805
Homological reconstruction and simplification in R3
D. Attali, U. Bauer, O. Devillers, M. Glisse, A. Lieutier, Computational Geometry: Theory and Applications 48 (2015) 606–621.
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D. Attali, U. Bauer, O. Devillers, M. Glisse, A. Lieutier, Computational Geometry: Theory and Applications 48 (2015) 606–621.
2015 | Journal Article | IST-REx-ID: 1807 |

Sharp interface limit for two components Bose-Einstein condensates
M. Goldman, J. Royo-Letelier, ESAIM - Control, Optimisation and Calculus of Variations 21 (2015) 603–624.
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M. Goldman, J. Royo-Letelier, ESAIM - Control, Optimisation and Calculus of Variations 21 (2015) 603–624.
2015 | Journal Article | IST-REx-ID: 1808
Guest editors' introduction to special issue on computational methods in systems biology
A. Gupta, T.A. Henzinger, ACM Transactions on Modeling and Computer Simulation 25 (2015).
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A. Gupta, T.A. Henzinger, ACM Transactions on Modeling and Computer Simulation 25 (2015).
2015 | Journal Article | IST-REx-ID: 1809 |

Indirect genetic effects and the dynamics of social interactions
B. Trubenova, S. Novak, R. Hager, PLoS One 10 (2015).
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B. Trubenova, S. Novak, R. Hager, PLoS One 10 (2015).
2015 | Journal Article | IST-REx-ID: 1810 |

Antimicrobial interactions: Mechanisms and implications for drug discovery and resistance evolution
M.T. Bollenbach, Current Opinion in Microbiology 27 (2015) 1–9.
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M.T. Bollenbach, Current Opinion in Microbiology 27 (2015) 1–9.
2015 | Journal Article | IST-REx-ID: 1811 |

Analytical evaluation of atomic form factors: Application to Rayleigh scattering
L. Safari, J. Santos, P. Amaro, K. Jänkälä, F. Fratini, Journal of Mathematical Physics 56 (2015).
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L. Safari, J. Santos, P. Amaro, K. Jänkälä, F. Fratini, Journal of Mathematical Physics 56 (2015).
2015 | Journal Article | IST-REx-ID: 1812 |

Exotic roton excitations in quadrupolar Bose–Einstein condensates
M. Lahrz, M. Lemeshko, L. Mathey, New Journal of Physics 17 (2015).
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M. Lahrz, M. Lemeshko, L. Mathey, New Journal of Physics 17 (2015).
2015 | Journal Article | IST-REx-ID: 1813 |

Rotation of quantum impurities in the presence of a many-body environment
R. Schmidt, M. Lemeshko, Physical Review Letters 114 (2015).
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R. Schmidt, M. Lemeshko, Physical Review Letters 114 (2015).
2015 | Journal Article | IST-REx-ID: 1814 |

Water wave animation via wavefront parameter interpolation
S. Jeschke, C.J. Wojtan, ACM Transactions on Graphics 34 (2015).
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S. Jeschke, C.J. Wojtan, ACM Transactions on Graphics 34 (2015).
2015 | Journal Article | IST-REx-ID: 1817 |

YAP is essential for tissue tension to ensure vertebrate 3D body shape
S. Porazinski, H. Wang, Y. Asaoka, M. Behrndt, T. Miyamoto, H. Morita, S. Hata, T. Sasaki, G. Krens, Y. Osada, S. Asaka, A. Momoi, S. Linton, J. Miesfeld, B. Link, T. Senga, A. Castillo Morales, A. Urrutia, N. Shimizu, H. Nagase, S. Matsuura, S. Bagby, H. Kondoh, H. Nishina, C.-P.J. Heisenberg, M. Furutani Seiki, Nature 521 (2015) 217–221.
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S. Porazinski, H. Wang, Y. Asaoka, M. Behrndt, T. Miyamoto, H. Morita, S. Hata, T. Sasaki, G. Krens, Y. Osada, S. Asaka, A. Momoi, S. Linton, J. Miesfeld, B. Link, T. Senga, A. Castillo Morales, A. Urrutia, N. Shimizu, H. Nagase, S. Matsuura, S. Bagby, H. Kondoh, H. Nishina, C.-P.J. Heisenberg, M. Furutani Seiki, Nature 521 (2015) 217–221.
2015 | Journal Article | IST-REx-ID: 1818 |

Limits to adaptation along environmental gradients
J. Polechova, N.H. Barton, PNAS 112 (2015) 6401–6406.
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J. Polechova, N.H. Barton, PNAS 112 (2015) 6401–6406.
2015 | Journal Article | IST-REx-ID: 1819
Osmotic stress modulates the balance between exocytosis and clathrin mediated endocytosis in Arabidopsis thaliana
M. Zwiewka, T. Nodzyński, S. Robert, S. Vanneste, J. Friml, Molecular Plant 8 (2015) 1175–1187.
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M. Zwiewka, T. Nodzyński, S. Robert, S. Vanneste, J. Friml, Molecular Plant 8 (2015) 1175–1187.
2015 | Conference Paper | IST-REx-ID: 1820 |

Optimal cost almost-sure reachability in POMDPs
K. Chatterjee, M. Chmelik, R. Gupta, A. Kanodia, in:, Proceedings of the Twenty-Ninth AAAI Conference on Artificial Intelligence , AAAI Press, 2015, pp. 3496–3502.
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| arXiv
K. Chatterjee, M. Chmelik, R. Gupta, A. Kanodia, in:, Proceedings of the Twenty-Ninth AAAI Conference on Artificial Intelligence , AAAI Press, 2015, pp. 3496–3502.
2015 | Journal Article | IST-REx-ID: 1823 |

Systematic discovery of drug interaction mechanisms
G. Chevereau, M.T. Bollenbach, Molecular Systems Biology 11 (2015).
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G. Chevereau, M.T. Bollenbach, Molecular Systems Biology 11 (2015).
2015 | Journal Article | IST-REx-ID: 1824 |

Evolutionary games of condensates in coupled birth-death processes
J. Knebel, M. Weber, T.H. Krüger, E. Frey, Nature Communications 6 (2015).
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J. Knebel, M. Weber, T.H. Krüger, E. Frey, Nature Communications 6 (2015).
2015 | Journal Article | IST-REx-ID: 1827 |

Evolution of bow-tie architectures in biology
T. Friedlander, A. Mayo, T. Tlusty, U. Alon, PLoS Computational Biology 11 (2015).
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T. Friedlander, A. Mayo, T. Tlusty, U. Alon, PLoS Computational Biology 11 (2015).
2015 | Journal Article | IST-REx-ID: 1828 |

Invariant measures of genetic recombination process
A. Akopyan, S. Pirogov, A. Rybko, Journal of Statistical Physics 160 (2015) 163–167.
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A. Akopyan, S. Pirogov, A. Rybko, Journal of Statistical Physics 160 (2015) 163–167.
2015 | Journal Article | IST-REx-ID: 1830 |

Opposing effects of allogrooming on disease transmission in ant societies
F. Theis, L.V. Ugelvig, C. Marr, S. Cremer, Philosophical Transactions of the Royal Society of London. Series B, Biological Sciences 370 (2015).
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F. Theis, L.V. Ugelvig, C. Marr, S. Cremer, Philosophical Transactions of the Royal Society of London. Series B, Biological Sciences 370 (2015).
2015 | Journal Article | IST-REx-ID: 1831 |

Sociality and health: Impacts of sociality on disease susceptibility and transmission in animal and human societies
P. Kappeler, S. Cremer, C. Nunn, Philosophical Transactions of the Royal Society of London. Series B, Biological Sciences 370 (2015).
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P. Kappeler, S. Cremer, C. Nunn, Philosophical Transactions of the Royal Society of London. Series B, Biological Sciences 370 (2015).
2015 | Journal Article | IST-REx-ID: 1832 |

Aspect-oriented linearizability proofs
S. Chakraborty, T.A. Henzinger, A. Sezgin, V. Vafeiadis, Logical Methods in Computer Science 11 (2015).
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S. Chakraborty, T.A. Henzinger, A. Sezgin, V. Vafeiadis, Logical Methods in Computer Science 11 (2015).
2015 | Journal Article | IST-REx-ID: 1834 |

Low-dose sevoflurane promoteshippocampal neurogenesis and facilitates the development of dentate gyrus-dependent learning in neonatal rats
C. Chen, C. Wang, X. Zhao, T. Zhou, D. Xu, Z. Wang, Y. Wang, ASN Neuro 7 (2015).
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C. Chen, C. Wang, X. Zhao, T. Zhou, D. Xu, Z. Wang, Y. Wang, ASN Neuro 7 (2015).
2015 | Conference Paper | IST-REx-ID: 1835 |

Model checking gene regulatory networks
M. Giacobbe, C.C. Guet, A. Gupta, T.A. Henzinger, T. Paixao, T. Petrov, 9035 (2015) 469–483.
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M. Giacobbe, C.C. Guet, A. Gupta, T.A. Henzinger, T. Paixao, T. Petrov, 9035 (2015) 469–483.
2015 | Conference Paper | IST-REx-ID: 1836
Segment abstraction for worst-case execution time analysis
P. Cerny, T.A. Henzinger, L. Kovács, A. Radhakrishna, J. Zwirchmayr, 9032 (2015) 105–131.
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P. Cerny, T.A. Henzinger, L. Kovács, A. Radhakrishna, J. Zwirchmayr, 9032 (2015) 105–131.
2015 | Journal Article | IST-REx-ID: 1837 |

Subcritical versus supercritical transition to turbulence in curved pipes
J. Kühnen, P. Braunshier, M. Schwegel, H. Kuhlmann, B. Hof, Journal of Fluid Mechanics 770 (2015).
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| arXiv
J. Kühnen, P. Braunshier, M. Schwegel, H. Kuhlmann, B. Hof, Journal of Fluid Mechanics 770 (2015).
2015 | Conference Paper | IST-REx-ID: 1838 |

Assume-guarantee synthesis for concurrent reactive programs with partial information
R. Bloem, K. Chatterjee, S. Jacobs, R. Könighofer, in:, Springer, 2015, pp. 517–532.
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R. Bloem, K. Chatterjee, S. Jacobs, R. Könighofer, in:, Springer, 2015, pp. 517–532.
2015 | Conference Paper | IST-REx-ID: 1839 |

Multigain: A controller synthesis tool for MDPs with multiple mean-payoff objectives
T. Brázdil, K. Chatterjee, V. Forejt, A. Kučera, 9035 (2015) 181–187.
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T. Brázdil, K. Chatterjee, V. Forejt, A. Kučera, 9035 (2015) 181–187.
2015 | Journal Article | IST-REx-ID: 1840 |

Optimal Kullback-Leibler aggregation via information bottleneck
B. Geiger, T. Petrov, G. Kubin, H. Koeppl, IEEE Transactions on Automatic Control 60 (2015) 1010–1022.
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B. Geiger, T. Petrov, G. Kubin, H. Koeppl, IEEE Transactions on Automatic Control 60 (2015) 1010–1022.
2015 | Journal Article | IST-REx-ID: 1841 |

A new look at reweighted message passing
V. Kolmogorov, IEEE Transactions on Pattern Analysis and Machine Intelligence 37 (2015) 919–930.
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V. Kolmogorov, IEEE Transactions on Pattern Analysis and Machine Intelligence 37 (2015) 919–930.
2015 | Journal Article | IST-REx-ID: 1843
Erratum to: Characterizing spiking in noisy type II neurons [J. Theor. Biol. 365 (2015) 40–54]
K. Bod’ová, D. Paydarfar, D. Forger, Journal of Theoretical Biology 373 (2015).
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K. Bod’ová, D. Paydarfar, D. Forger, Journal of Theoretical Biology 373 (2015).
2015 | Journal Article | IST-REx-ID: 1845 |

Excitement about inhibitory presynaptic terminals
D.H. Vandael, C.M. Espinoza Martinez, P.M. Jonas, Neuron 85 (2015) 1149–1151.
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D.H. Vandael, C.M. Espinoza Martinez, P.M. Jonas, Neuron 85 (2015) 1149–1151.
2015 | Journal Article | IST-REx-ID: 1846 |

Refinement checking on parametric modal transition systems
N. Beneš, J. Kretinsky, K. Larsen, M. Möller, S. Sickert, J. Srba, Acta Informatica 52 (2015) 269–297.
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N. Beneš, J. Kretinsky, K. Larsen, M. Möller, S. Sickert, J. Srba, Acta Informatica 52 (2015) 269–297.
2015 | Journal Article | IST-REx-ID: 1847
ABP1: Finally docking
P. Grones, J. Friml, Molecular Plant 8 (2015) 356–358.
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| DOI
P. Grones, J. Friml, Molecular Plant 8 (2015) 356–358.
2015 | Journal Article | IST-REx-ID: 1848 |

FAM96A is a novel pro-apoptotic tumor suppressor in gastrointestinal stromal tumors
B. Schwamb, R. Pick, S. Fernández, K. Völp, J. Heering, V. Dötsch, S. Bösser, J. Jung, R. Beinoravičiute Kellner, J. Wesely, I. Zörnig, M. Hammerschmidt, M. Nowak, R. Penzel, K. Zatloukal, S. Joos, R. Rieker, A. Agaimy, S. Söder, K. Reid Lombardo, M. Kendrick, M. Bardsley, Y. Hayashi, D. Asuzu, S. Syed, T. Ördög, M. Zörnig, International Journal of Cancer 137 (2015) 1318–1329.
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| PubMed | Europe PMC
B. Schwamb, R. Pick, S. Fernández, K. Völp, J. Heering, V. Dötsch, S. Bösser, J. Jung, R. Beinoravičiute Kellner, J. Wesely, I. Zörnig, M. Hammerschmidt, M. Nowak, R. Penzel, K. Zatloukal, S. Joos, R. Rieker, A. Agaimy, S. Söder, K. Reid Lombardo, M. Kendrick, M. Bardsley, Y. Hayashi, D. Asuzu, S. Syed, T. Ördög, M. Zörnig, International Journal of Cancer 137 (2015) 1318–1329.
2015 | Journal Article | IST-REx-ID: 1849
Calcium is an organizer of cell polarity in plants
E. Himschoot, T. Beeckman, J. Friml, S. Vanneste, Biochimica et Biophysica Acta - Molecular Cell Research 1853 (2015) 2168–2172.
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E. Himschoot, T. Beeckman, J. Friml, S. Vanneste, Biochimica et Biophysica Acta - Molecular Cell Research 1853 (2015) 2168–2172.
2015 | Journal Article | IST-REx-ID: 1850 |

Fungal disease dynamics in insect societies: Optimal killing rates and the ambivalent effect of high social interaction rates
S. Novak, S. Cremer, Journal of Theoretical Biology 372 (2015) 54–64.
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S. Novak, S. Cremer, Journal of Theoretical Biology 372 (2015) 54–64.
2015 | Journal Article | IST-REx-ID: 1851 |

Evolutionarily stable mating decisions for sequentially searching females and the stability of reproductive isolation by assortative mating
T. Priklopil, E. Kisdi, M. Gyllenberg, Evolution 69 (2015) 1015–1026.
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T. Priklopil, E. Kisdi, M. Gyllenberg, Evolution 69 (2015) 1015–1026.
2015 | Journal Article | IST-REx-ID: 1855 |

A sting in the spit: Widespread cross-infection of multiple RNA viruses across wild and managed bees
D. Mcmahon, M. Fürst, J. Caspar, P. Theodorou, M. Brown, R. Paxton, Journal of Animal Ecology 84 (2015) 615–624.
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D. Mcmahon, M. Fürst, J. Caspar, P. Theodorou, M. Brown, R. Paxton, Journal of Animal Ecology 84 (2015) 615–624.
2015 | Journal Article | IST-REx-ID: 1856 |

Measuring and synthesizing systems in probabilistic environments
K. Chatterjee, T.A. Henzinger, B. Jobstmann, R. Singh, Journal of the ACM 62 (2015).
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K. Chatterjee, T.A. Henzinger, B. Jobstmann, R. Singh, Journal of the ACM 62 (2015).
2015 | Conference Paper | IST-REx-ID: 1857 |

Curriculum learning of multiple tasks
A. Pentina, V. Sharmanska, C. Lampert, in:, IEEE, 2015, pp. 5492–5500.
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A. Pentina, V. Sharmanska, C. Lampert, in:, IEEE, 2015, pp. 5492–5500.
2015 | Conference Paper | IST-REx-ID: 1858 |

Predicting the future behavior of a time-varying probability distribution
C. Lampert, in:, IEEE, 2015, pp. 942–950.
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| arXiv
C. Lampert, in:, IEEE, 2015, pp. 942–950.
2015 | Conference Paper | IST-REx-ID: 1859 |

A multi-plane block-coordinate Frank-Wolfe algorithm for training structural SVMs with a costly max-oracle
N. Shah, V. Kolmogorov, C. Lampert, in:, IEEE, 2015, pp. 2737–2745.
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N. Shah, V. Kolmogorov, C. Lampert, in:, IEEE, 2015, pp. 2737–2745.
2015 | Conference Paper | IST-REx-ID: 1860 |

Classifier adaptation at prediction time
A. Royer, C. Lampert, in:, IEEE, 2015, pp. 1401–1409.
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A. Royer, C. Lampert, in:, IEEE, 2015, pp. 1401–1409.
2015 | Journal Article | IST-REx-ID: 1861
Moment-based methods for parameter inference and experiment design for stochastic biochemical reaction networks
J. Ruess, J. Lygeros, ACM Transactions on Modeling and Computer Simulation 25 (2015).
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J. Ruess, J. Lygeros, ACM Transactions on Modeling and Computer Simulation 25 (2015).
2015 | Journal Article | IST-REx-ID: 1864 |

The Altshuler–Shklovskii formulas for random band matrices II: The general case
L. Erdös, A. Knowles, Annales Henri Poincare 16 (2015) 709–799.
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L. Erdös, A. Knowles, Annales Henri Poincare 16 (2015) 709–799.
2015 | Journal Article | IST-REx-ID: 1865
Plant embryogenesis requires AUX/LAX-mediated auxin influx
H. Robert, W. Grunewald, M. Sauer, B. Cannoot, M. Soriano, R. Swarup, D. Weijers, M. Bennett, K. Boutilier, J. Friml, Development 142 (2015) 702–711.
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| DOI
H. Robert, W. Grunewald, M. Sauer, B. Cannoot, M. Soriano, R. Swarup, D. Weijers, M. Bennett, K. Boutilier, J. Friml, Development 142 (2015) 702–711.
2015 | Journal Article | IST-REx-ID: 1866
The equivalence problem for finite automata: Technical perspective
T.A. Henzinger, J. Raskin, Communications of the ACM 58 (2015) 86–86.
View
| DOI
T.A. Henzinger, J. Raskin, Communications of the ACM 58 (2015) 86–86.
2015 | Journal Article | IST-REx-ID: 1867
Quantification of riboflavin, flavin mononucleotide, and flavin adenine dinucleotide in mammalian model cells by CE with LED-induced fluorescence detection
J. Hühner, Á. Inglés Prieto, C. Neusüß, M. Lämmerhofer, H.L. Janovjak, Electrophoresis 36 (2015) 518–525.
View
| DOI
J. Hühner, Á. Inglés Prieto, C. Neusüß, M. Lämmerhofer, H.L. Janovjak, Electrophoresis 36 (2015) 518–525.
2015 | Journal Article | IST-REx-ID: 1868
Early effect in time-dependent, high-dimensional nonlinear dynamical systems with multiple resonances
Y. Park, Y. Do, S. Altmeyer, Y. Lai, G. Lee, Physical Review E 91 (2015).
View
| DOI
Y. Park, Y. Do, S. Altmeyer, Y. Lai, G. Lee, Physical Review E 91 (2015).
2015 | Journal Article | IST-REx-ID: 1871 |

Auxin transporters and binding proteins at a glance
P. Grones, J. Friml, Journal of Cell Science 128 (2015) 1–7.
View
| Files available
| DOI
P. Grones, J. Friml, Journal of Cell Science 128 (2015) 1–7.
2015 | Journal Article | IST-REx-ID: 1873 |

POMDPs under probabilistic semantics
K. Chatterjee, M. Chmelik, Artificial Intelligence 221 (2015) 46–72.
View
| DOI
| Download Preprint (ext.)
| arXiv
K. Chatterjee, M. Chmelik, Artificial Intelligence 221 (2015) 46–72.
2015 | Journal Article | IST-REx-ID: 1874
A three-plane architectonic atlas of the rat hippocampal region
C.N. Boccara, L. Kjønigsen, I. Hammer, J. Bjaalie, T. Leergaard, M. Witter, Hippocampus 25 (2015) 838–857.
View
| DOI
C.N. Boccara, L. Kjønigsen, I. Hammer, J. Bjaalie, T. Leergaard, M. Witter, Hippocampus 25 (2015) 838–857.
2015 | Journal Article | IST-REx-ID: 1878
Phylogenetic relationships of Petrocoptis A. Braun ex Endl. (Caryophyllaceae), a discussed genus from the Iberian Peninsula
E. Cires Rodriguez, J. Prieto, Journal of Plant Research 128 (2015) 223–238.
View
| DOI
E. Cires Rodriguez, J. Prieto, Journal of Plant Research 128 (2015) 223–238.
2015 | Journal Article | IST-REx-ID: 1879 |

Developing 3D SEM in a broad biological context
A. Kremer, S. Lippens, S. Bartunkova, B. Asselbergh, C. Blanpain, M. Fendrych, A. Goossens, M. Holt, S. Janssens, M. Krols, J. Larsimont, C. Mc Guire, M. Nowack, X. Saelens, A. Schertel, B. Schepens, M. Slezak, V. Timmerman, C. Theunis, R. Van Brempt, Y. Visser, C. Guérin, Journal of Microscopy 259 (2015) 80–96.
View
| Files available
| DOI
A. Kremer, S. Lippens, S. Bartunkova, B. Asselbergh, C. Blanpain, M. Fendrych, A. Goossens, M. Holt, S. Janssens, M. Krols, J. Larsimont, C. Mc Guire, M. Nowack, X. Saelens, A. Schertel, B. Schepens, M. Slezak, V. Timmerman, C. Theunis, R. Van Brempt, Y. Visser, C. Guérin, Journal of Microscopy 259 (2015) 80–96.
2015 | Journal Article | IST-REx-ID: 1880 |

Superfluid behavior of a Bose-Einstein condensate in a random potential
M. Könenberg, T. Moser, R. Seiringer, J. Yngvason, New Journal of Physics 17 (2015).
View
| Files available
| DOI
M. Könenberg, T. Moser, R. Seiringer, J. Yngvason, New Journal of Physics 17 (2015).
2015 | Conference Paper | IST-REx-ID: 1882 |

Compositionality for quantitative specifications
U. Fahrenberg, J. Kretinsky, A. Legay, L. Traonouez, in:, Springer, 2015, pp. 306–324.
View
| DOI
| Download Preprint (ext.)
U. Fahrenberg, J. Kretinsky, A. Legay, L. Traonouez, in:, Springer, 2015, pp. 306–324.
2015 | Journal Article | IST-REx-ID: 1883 |

Anomalous scaling in an age-dependent branching model
S. Keller-Schmidt, M. Tugrul, V. Eguíluz, E. Hernandez Garcia, K. Klemm, Physical Review E Statistical Nonlinear and Soft Matter Physics 91 (2015).
View
| DOI
| Download Preprint (ext.)
| arXiv
S. Keller-Schmidt, M. Tugrul, V. Eguíluz, E. Hernandez Garcia, K. Klemm, Physical Review E Statistical Nonlinear and Soft Matter Physics 91 (2015).
2015 | Journal Article | IST-REx-ID: 1885 |

Positional information, positional error, and readout precision in morphogenesis: A mathematical framework
G. Tkačik, J. Dubuis, M. Petkova, T. Gregor, Genetics 199 (2015) 39–59.
View
| DOI
| Download Preprint (ext.)
G. Tkačik, J. Dubuis, M. Petkova, T. Gregor, Genetics 199 (2015) 39–59.
2015 | Journal Article | IST-REx-ID: 1938
On the distribution of local extrema in quantum chaos
F. Pausinger, S. Steinerberger, Physics Letters, Section A 379 (2015) 535–541.
View
| DOI
F. Pausinger, S. Steinerberger, Physics Letters, Section A 379 (2015) 535–541.
2015 | Journal Article | IST-REx-ID: 1939
Erratum to: Excitation spectrum of interacting bosons in the Mean-Field Infinite-Volume limit
J. Dereziński, M.M. Napiórkowski, Annales Henri Poincare 16 (2015) 1709–1711.
View
| Files available
| DOI
J. Dereziński, M.M. Napiórkowski, Annales Henri Poincare 16 (2015) 1709–1711.
2015 | Journal Article | IST-REx-ID: 1940 |

Optimizing information flow in small genetic networks. IV. Spatial coupling
T.R. Sokolowski, G. Tkačik, Physical Review E Statistical Nonlinear and Soft Matter Physics 91 (2015).
View
| DOI
| Download Preprint (ext.)
T.R. Sokolowski, G. Tkačik, Physical Review E Statistical Nonlinear and Soft Matter Physics 91 (2015).
2015 | Journal Article | IST-REx-ID: 1944
Intracellular trafficking and PIN-mediated cell polarity during tropic responses in plants
H. Rakusová, M. Fendrych, J. Friml, Current Opinion in Plant Biology 23 (2015) 116–123.
View
| DOI
H. Rakusová, M. Fendrych, J. Friml, Current Opinion in Plant Biology 23 (2015) 116–123.
2015 | Conference Paper | IST-REx-ID: 1992 |

Succinct representation of concurrent trace sets
A. Gupta, T.A. Henzinger, A. Radhakrishna, R. Samanta, T. Tarrach, in:, ACM, 2015, pp. 433–444.
View
| Files available
| DOI
A. Gupta, T.A. Henzinger, A. Radhakrishna, R. Samanta, T. Tarrach, in:, ACM, 2015, pp. 433–444.
2015 | Journal Article | IST-REx-ID: 1993 |

Anti-pathogen protection versus survival costs mediated by an ectosymbiont in an ant host
M. Konrad, A.V. Grasse, S. Tragust, S. Cremer, Proceedings of the Royal Society of London Series B Biological Sciences 282 (2015).
View
| DOI
| Download Submitted Version (ext.)
| PubMed | Europe PMC
M. Konrad, A.V. Grasse, S. Tragust, S. Cremer, Proceedings of the Royal Society of London Series B Biological Sciences 282 (2015).
2015 | Journal Article | IST-REx-ID: 1997 |

The three-state toric homogeneous Markov chain model has Markov degree two
P. Noren, Journal of Symbolic Computation 68/Part 2 (2015) 285–296.
View
| DOI
| Download Preprint (ext.)
P. Noren, Journal of Symbolic Computation 68/Part 2 (2015) 285–296.
2015 | Journal Article | IST-REx-ID: 2006 |

The monotone secant conjecture in the real Schubert calculus
N. Hein, C. Hillar, A. Martin del Campo Sanchez, F. Sottile, Z. Teitler, Experimental Mathematics 24 (2015) 261–269.
View
| DOI
| Download Preprint (ext.)
N. Hein, C. Hillar, A. Martin del Campo Sanchez, F. Sottile, Z. Teitler, Experimental Mathematics 24 (2015) 261–269.
2015 | Journal Article | IST-REx-ID: 2008 |

Iterative scaling in curved exponential families
A. Klimova, T. Rudas, Scandinavian Journal of Statistics 42 (2015) 832–847.
View
| DOI
| Download Preprint (ext.)
A. Klimova, T. Rudas, Scandinavian Journal of Statistics 42 (2015) 832–847.
2015 | Journal Article | IST-REx-ID: 2014 |

Faithfulness and learning hypergraphs from discrete distributions
A. Klimova, C. Uhler, T. Rudas, Computational Statistics & Data Analysis 87 (2015) 57–72.
View
| DOI
| Download Preprint (ext.)
A. Klimova, C. Uhler, T. Rudas, Computational Statistics & Data Analysis 87 (2015) 57–72.
2015 | Journal Article | IST-REx-ID: 2025 |

The yeast Arf-GAP Glo3p is required for the endocytic recycling of cell surface proteins
D. Kawada, H. Kobayashi, T. Tomita, E. Nakata, M. Nagano, D.E. Siekhaus, J. Toshima, J. Toshimaa, Biochimica et Biophysica Acta - Molecular Cell Research 1853 (2015) 144–156.
View
| Files available
| DOI
D. Kawada, H. Kobayashi, T. Tomita, E. Nakata, M. Nagano, D.E. Siekhaus, J. Toshima, J. Toshimaa, Biochimica et Biophysica Acta - Molecular Cell Research 1853 (2015) 144–156.
2015 | Journal Article | IST-REx-ID: 2030 |

A hybrid MPI-OpenMP parallel implementation for pseudospectral simulations with application to Taylor-Couette flow
L. Shi, M. Rampp, B. Hof, M. Avila, Computers and Fluids 106 (2015) 1–11.
View
| DOI
| Download Preprint (ext.)
L. Shi, M. Rampp, B. Hof, M. Avila, Computers and Fluids 106 (2015) 1–11.
2015 | Journal Article | IST-REx-ID: 2034 |

Probabilistic opacity for Markov decision processes
B. Bérard, K. Chatterjee, N. Sznajder, Information Processing Letters 115 (2015) 52–59.
View
| DOI
| Download Preprint (ext.)
B. Bérard, K. Chatterjee, N. Sznajder, Information Processing Letters 115 (2015) 52–59.
2015 | Journal Article | IST-REx-ID: 2035 |

The persistent homology of a self-map
H. Edelsbrunner, G. Jablonski, M. Mrozek, Foundations of Computational Mathematics 15 (2015) 1213–1244.
View
| Files available
| DOI
H. Edelsbrunner, G. Jablonski, M. Mrozek, Foundations of Computational Mathematics 15 (2015) 1213–1244.
2015 | Journal Article | IST-REx-ID: 2085 |

Collective excitations of Bose gases in the mean-field regime
P. Nam, R. Seiringer, Archive for Rational Mechanics and Analysis 215 (2015) 381–417.
View
| DOI
| Download Preprint (ext.)
P. Nam, R. Seiringer, Archive for Rational Mechanics and Analysis 215 (2015) 381–417.
2015 | Journal Article | IST-REx-ID: 2166 |

The Altshuler-Shklovskii formulas for random band matrices I: the unimodular case
L. Erdös, A. Knowles, Communications in Mathematical Physics 333 (2015) 1365–1416.
View
| DOI
| Download Preprint (ext.)
L. Erdös, A. Knowles, Communications in Mathematical Physics 333 (2015) 1365–1416.
2015 | Journal Article | IST-REx-ID: 7456
Solvothermal synthesis and controlled self-assembly of monodisperse titanium-based perovskite colloidal nanocrystals
D. Caruntu, T. Rostamzadeh, T. Costanzo, S. Salemizadeh Parizi, G. Caruntu, Nanoscale 7 (2015) 12955–12969.
View
| DOI
| PubMed | Europe PMC
D. Caruntu, T. Rostamzadeh, T. Costanzo, S. Salemizadeh Parizi, G. Caruntu, Nanoscale 7 (2015) 12955–12969.
2015 | Journal Article | IST-REx-ID: 7457
Fabrication of barium titanate/acrylonitrile-butadiene styrene/poly(methyl methacrylate) nanocomposite films for hybrid ferroelectric capacitors
S.S. Parizi, G. Conley, T. Costanzo, B. Howell, A. Mellinger, G. Caruntu, RSC Advances 5 (2015) 76356–76362.
View
| DOI
S.S. Parizi, G. Conley, T. Costanzo, B. Howell, A. Mellinger, G. Caruntu, RSC Advances 5 (2015) 76356–76362.
2015 | Journal Article | IST-REx-ID: 7739 |

Replicated analysis of the genetic architecture of quantitative traits in two wild great tit populations
A.W. Santure, J. Poissant, I. De Cauwer, K. van Oers, M.R. Robinson, J.L. Quinn, M.A.M. Groenen, M.E. Visser, B.C. Sheldon, J. Slate, Molecular Ecology 24 (2015) 6148–6162.
View
| DOI
| Download Published Version (ext.)
A.W. Santure, J. Poissant, I. De Cauwer, K. van Oers, M.R. Robinson, J.L. Quinn, M.A.M. Groenen, M.E. Visser, B.C. Sheldon, J. Slate, Molecular Ecology 24 (2015) 6148–6162.
2015 | Journal Article | IST-REx-ID: 7741 |

Social genetic and social environment effects on parental and helper care in a cooperatively breeding bird
M.J. Adams, M.R. Robinson, M.-E. Mannarelli, B.J. Hatchwell, Proceedings of the Royal Society B: Biological Sciences 282 (2015).
View
| DOI
| Download Published Version (ext.)
| PubMed | Europe PMC
M.J. Adams, M.R. Robinson, M.-E. Mannarelli, B.J. Hatchwell, Proceedings of the Royal Society B: Biological Sciences 282 (2015).
2015 | Journal Article | IST-REx-ID: 7742
Population genetic differentiation of height and body mass index across Europe
M.R. Robinson, G. Hemani, C. Medina-Gomez, M. Mezzavilla, T. Esko, K. Shakhbazov, J.E. Powell, A. Vinkhuyzen, S.I. Berndt, S. Gustafsson, A.E. Justice, B. Kahali, A.E. Locke, T.H. Pers, S. Vedantam, A.R. Wood, W. van Rheenen, O.A. Andreassen, P. Gasparini, A. Metspalu, L.H. van den Berg, J.H. Veldink, F. Rivadeneira, T.M. Werge, G.R. Abecasis, D.I. Boomsma, D.I. Chasman, E.J.C. de Geus, T.M. Frayling, J.N. Hirschhorn, J.J. Hottenga, E. Ingelsson, R.J.F. Loos, P.K.E. Magnusson, N.G. Martin, G.W. Montgomery, K.E. North, N.L. Pedersen, T.D. Spector, E.K. Speliotes, M.E. Goddard, J. Yang, P.M. Visscher, Nature Genetics 47 (2015) 1357–1362.
View
| DOI
M.R. Robinson, G. Hemani, C. Medina-Gomez, M. Mezzavilla, T. Esko, K. Shakhbazov, J.E. Powell, A. Vinkhuyzen, S.I. Berndt, S. Gustafsson, A.E. Justice, B. Kahali, A.E. Locke, T.H. Pers, S. Vedantam, A.R. Wood, W. van Rheenen, O.A. Andreassen, P. Gasparini, A. Metspalu, L.H. van den Berg, J.H. Veldink, F. Rivadeneira, T.M. Werge, G.R. Abecasis, D.I. Boomsma, D.I. Chasman, E.J.C. de Geus, T.M. Frayling, J.N. Hirschhorn, J.J. Hottenga, E. Ingelsson, R.J.F. Loos, P.K.E. Magnusson, N.G. Martin, G.W. Montgomery, K.E. North, N.L. Pedersen, T.D. Spector, E.K. Speliotes, M.E. Goddard, J. Yang, P.M. Visscher, Nature Genetics 47 (2015) 1357–1362.
2015 | Conference Paper | IST-REx-ID: 776
The SprayList: A scalable relaxed priority queue
D.-A. Alistarh, J. Kopinsky, J. Li, N. Shavit, in:, ACM, 2015, pp. 11–20.
View
| DOI
D.-A. Alistarh, J. Kopinsky, J. Li, N. Shavit, in:, ACM, 2015, pp. 11–20.
2015 | Journal Article | IST-REx-ID: 7765
The principle of independent bond-level response: Tuning by pruning to exploit disorder for global behavior
C.P. Goodrich, A.J. Liu, S.R. Nagel, Physical Review Letters 114 (2015).
View
| DOI
C.P. Goodrich, A.J. Liu, S.R. Nagel, Physical Review Letters 114 (2015).
2015 | Journal Article | IST-REx-ID: 7766
Disordered surface vibrations in jammed sphere packings
D.M. Sussman, C.P. Goodrich, A.J. Liu, S.R. Nagel, Soft Matter 11 (2015) 2745–2751.
View
| DOI
D.M. Sussman, C.P. Goodrich, A.J. Liu, S.R. Nagel, Soft Matter 11 (2015) 2745–2751.
2015 | Journal Article | IST-REx-ID: 7767
Collective dynamics of soft active particles
R. van Drongelen, A. Pal, C.P. Goodrich, T. Idema, Physical Review E 91 (2015).
View
| DOI
R. van Drongelen, A. Pal, C.P. Goodrich, T. Idema, Physical Review E 91 (2015).
2015 | Conference Paper | IST-REx-ID: 777
Streaming min-max hypergraph partitioning
D.-A. Alistarh, J. Iglesias, M. Vojnović, in:, Neural Information Processing Systems, 2015, pp. 1900–1908.
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| Download None (ext.)
D.-A. Alistarh, J. Iglesias, M. Vojnović, in:, Neural Information Processing Systems, 2015, pp. 1900–1908.
2015 | Preprint | IST-REx-ID: 7779 |

Unearthing the anticrystal: Criticality in the linear response of disordered solids
C.P. Goodrich, ArXiv:1510.08820 (2015).
View
| Download Preprint (ext.)
| arXiv
C.P. Goodrich, ArXiv:1510.08820 (2015).
2015 | Conference Paper | IST-REx-ID: 778 |

Inherent limitations of hybrid transactional memory
D.-A. Alistarh, J. Kopinsky, P. Kuznetsov, S. Ravi, N. Shavit, in:, Springer, 2015, pp. 185–199.
View
| DOI
| Download None (ext.)
| arXiv
D.-A. Alistarh, J. Kopinsky, P. Kuznetsov, S. Ravi, N. Shavit, in:, Springer, 2015, pp. 185–199.