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295 Publications


2012 | Journal Article | IST-REx-ID: 1756 | OA
Mongillo, M., Spathis, P., Katsaros, G., Gentile, P., & De Franceschi, S. (2012). Multifunctional devices and logic gates with undoped silicon nanowires. Nano Letters, 12(6), 3074–3079. https://doi.org/10.1021/nl300930m
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2012 | Journal Article | IST-REx-ID: 1757 | OA
Zhang, J., Katsaros, G., Montalenti, F., Scopece, D., Rezaev, R., Mickel, C., … Schmidt, O. (2012). Monolithic growth of ultrathin Ge nanowires on Si(001) . Physical Review Letters, 109(8). https://doi.org/10.1103/PhysRevLett.109.085502
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2012 | Journal Article | IST-REx-ID: 1758 | OA
Lee, E., Jiang, X., Aguado, R., Katsaros, G., Lieber, C., & De Franceschi, S. (2012). Zero-bias anomaly in a nanowire quantum dot coupled to superconductors. Physical Review Letters, 109(18). https://doi.org/10.1103/PhysRevLett.109.186802
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2012 | Journal Article | IST-REx-ID: 1782 | OA
Pechal, M., Berger, S., Abdumalikov, A., Fink, J. M., Mlynek, J., Steffen, L., … Filipp, S. (2012). Geometric phase and nonadiabatic effects in an electronic harmonic oscillator. Physical Review Letters, 108(17). https://doi.org/10.1103/PhysRevLett.108.170401
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2012 | Journal Article | IST-REx-ID: 1783 | OA
Mlynek, J., Abdumalikov, A., Fink, J. M., Steffen, L., Baur, M., Lang, C., … Wallraff, A. (2012). Demonstrating W-type entanglement of Dicke states in resonant cavity quantum electrodynamics. Physical Review A - Atomic, Molecular, and Optical Physics, 86(5). https://doi.org/10.1103/PhysRevA.86.053838
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2012 | Journal Article | IST-REx-ID: 1784
Eichler, C., Lang, C., Fink, J. M., Govenius, J., Filipp, S., & Wallraff, A. (2012). Observation of entanglement between itinerant microwave photons and a superconducting qubit. Physical Review Letters, 109(24). https://doi.org/10.1103/PhysRevLett.109.240501
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2012 | Journal Article | IST-REx-ID: 1801
Siegert, S., Cabuy, E., Scherf, B., Kohler, H., Panda, S., Le, Y., … Roska, B. (2012). Transcriptional code and disease map for adult retinal cell types. Nature Neuroscience, 15(3), 487–495. https://doi.org/10.1038/nn.3032
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2012 | Journal Article | IST-REx-ID: 1972
Efremov, R., & Sazanov, L. A. (2012). Structure of Escherichia coli OmpF porin from lipidic mesophase. Journal of Structural Biology, 178(3), 311–318. https://doi.org/10.1016/j.jsb.2012.03.005
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2012 | Book Review | IST-REx-ID: 1976
Efremov, R., & Sazanov, L. A. (2012). The coupling mechanism of respiratory complex i - A structural and evolutionary perspective. Biochimica et Biophysica Acta - Bioenergetics. Elsevier. https://doi.org/10.1016/j.bbabio.2012.02.015
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2012 | Journal Article | IST-REx-ID: 1987
Schweizer, J., Loose, M., Bonny, M., Kruse, K., Mönch, I., & Schwille, P. (2012). Geometry sensing by self-organized protein patterns. PNAS, 109(38), 15283–15288. https://doi.org/10.1073/pnas.1206953109
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2012 | Journal Article | IST-REx-ID: 801
Engel, J., Schmalhorst, P. S., & Routier, F. (2012). Biosynthesis of the fungal cell wall polysaccharide galactomannan requires intraluminal GDP-mannose. Journal of Biological Chemistry, 287(53), 44418–44424. https://doi.org/10.1074/jbc.M112.398321
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2012 | Journal Article | IST-REx-ID: 8024
Hennequin, G., Vogels, T. P., & Gerstner, W. (2012). Non-normal amplification in random balanced neuronal networks. Physical Review E, 86(1). https://doi.org/10.1103/physreve.86.011909
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2012 | Journal Article | IST-REx-ID: 808 | OA
Vinzenz, M., Nemethova, M., Schur, F. K., Mueller, J., Narita, A., Urban, E., … Small, J. (2012). Actin branching in the initiation and maintenance of lamellipodia. Journal of Cell Science, 125(11), 2775–2785. https://doi.org/10.1242/jcs.107623
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2012 | Journal Article | IST-REx-ID: 8246
Dengler, V., Meier, P. S., Heusser, R., Kupferschmied, P., Singer, J., Friebe, S., … McCallum, N. (2012). Deletion of hypothetical wall teichoic acid ligases in Staphylococcus aureus activates the cell wall stress response. FEMS Microbiology Letters, 333(2), 109–120. https://doi.org/10.1111/j.1574-6968.2012.02603.x
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2012 | Journal Article | IST-REx-ID: 826
Vanstraelen, M., & Benková, E. (2012). Hormonal interactions in the regulation of plant development. Annual Review of Cell and Developmental Biology, 28, 463–487. https://doi.org/10.1146/annurev-cellbio-101011-155741
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2012 | Journal Article | IST-REx-ID: 829
Bielach, A., Podlesakova, K., Marhavy, P., Duclercq, J., Cuesta, C., Muller, B., … Benková, E. (2012). Spatiotemporal regulation of lateral root organogenesis in Arabidopsis by cytokinin. The Plant Cell, 24(10), 3967–3981. https://doi.org/10.1105/tpc.112.103044
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2012 | Journal Article | IST-REx-ID: 846
Soylemez, O., & Kondrashov, F. (2012). Estimating the rate of irreversibility in protein evolution. Genome Biology and Evolution, 4(12), 1213–1222. https://doi.org/10.1093/gbe/evs096
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2012 | Journal Article | IST-REx-ID: 858
Povolotskaya, I., Kondrashov, F., Ledda, A., & Vlasov, P. (2012). Stop codons in bacteria are not selectively equivalent. Biology Direct, 7. https://doi.org/10.1186/1745-6150-7-30
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2012 | Journal Article | IST-REx-ID: 887
Kondrashov, F. (2012). Gene duplication as a mechanism of genomic adaptation to a changing environment. Proceedings of the Royal Society of London Series B Biological Sciences, 279(1749), 5048–5057. https://doi.org/10.1098/rspb.2012.1108
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2012 | Journal Article | IST-REx-ID: 900
Breen, M., Kemena, C., Vlasov, P., Notredame, C., & Kondrashov, F. (2012). Epistasis as the primary factor in molecular evolution. Nature, 490(7421), 535–538. https://doi.org/10.1038/nature11510
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2012 | Journal Article | IST-REx-ID: 91
Higginbotham, A. P., Cole, J., Blood Forsythe, M., & Hickstein, D. (2012). Identifying and evaluating organic nonlinear optical materials via molecular moments. Journal of Applied Physics, 111(3). https://doi.org/10.1063/1.3678593
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2012 | Journal Article | IST-REx-ID: 966 | OA
Bieri, S., Serbyn, M., Senthil, T., & Lee, P. (2012). Paired chiral spin liquid with a Fermi surface in S=1 model on the triangular lattice. Physical Review B - Condensed Matter and Materials Physics, 86(22). https://doi.org/10.1103/PhysRevB.86.224409
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2012 | Conference Paper | IST-REx-ID: 1384 | OA
Beyer, D., Henzinger, T. A., Keremoglu, M., & Wendler, P. (2012). Conditional model checking: A technique to pass information between verifiers. In Proceedings of the ACM SIGSOFT 20th International Symposium on the Foundations of Software Engineering. Cary, NC, USA: ACM. https://doi.org/10.1145/2393596.2393664
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2012 | Journal Article | IST-REx-ID: 1471 | OA
Hausel, T., & Pauly, C. (2012). Prym varieties of spectral covers. Geometry and Topology, 16(3), 1609–1638. https://doi.org/10.2140/gt.2012.16.1609
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2012 | Journal Article | IST-REx-ID: 1472 | OA
De Cataldo, M., Hausel, T., & Migliorini, L. (2012). Topology of hitchin systems and Hodge theory of character varieties: The case A 1. Annals of Mathematics, 175(3), 1329–1407. https://doi.org/10.4007/annals.2012.175.3.7
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2012 | Journal Article | IST-REx-ID: 113
Waitukaitis, S. R., & Jaeger, H. (2012). Impact-activated solidification of dense suspensions via dynamic jamming fronts. Nature, 487(7406), 205–209. https://doi.org/10.1038/nature11187
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2012 | Journal Article | IST-REx-ID: 114 | OA
Waitukaitis, S. R., & Jaeger, H. (2012). Solidification of a cornstarch and water suspension. Revista Cubana de Fisica, 29(1E), 1E31-1E33.
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2012 | Journal Article | IST-REx-ID: 3160
Pantazis, P., & Bollenbach, T. (2012). Transcription factor kinetics and the emerging asymmetry in the early mammalian embryo. Cell Cycle, 11(11), 2055–2058. https://doi.org/10.4161/cc.20118
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2012 | Journal Article | IST-REx-ID: 3161 | OA
Vyleta, M., Wong, J., & Magun, B. (2012). Suppression of ribosomal function triggers innate immune signaling through activation of the NLRP3 inflammasome. PLoS One, 7(5). https://doi.org/10.1371/journal.pone.0036044
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2012 | Conference Paper | IST-REx-ID: 3162 | OA
Asarin, E., Donzé, A., Maler, O., & Nickovic, D. (2012). Parametric identification of temporal properties (Vol. 7186, pp. 147–160). Presented at the RV: Runtime Verification, San Francisco, CA, United States: Springer. https://doi.org/10.1007/978-3-642-29860-8_12
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2012 | Journal Article | IST-REx-ID: 3164
Blaschko, M., & Lampert, C. (2012). Guest editorial: Special issue on structured prediction and inference. International Journal of Computer Vision, 99(3), 257–258. https://doi.org/10.1007/s11263-012-0530-y
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2012 | Conference Paper | IST-REx-ID: 3165
Chatterjee, K., & Henzinger, M. (2012). An O(n2) time algorithm for alternating Büchi games. In Proceedings of the Annual ACM-SIAM Symposium on Discrete Algorithms (pp. 1386–1399). Kyoto, Japan: SIAM. https://doi.org/10.1137/1.9781611973099.109
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2012 | Journal Article | IST-REx-ID: 3166 | OA
de Vladar, H. (2012). Amino acid fermentation at the origin of the genetic code. Biology Direct, 7. https://doi.org/10.1186/1745-6150-7-6
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2012 | Journal Article | IST-REx-ID: 3167
Weber, M. (2012). NextGen speaks 13 . Science, 336(6077), 32–34. https://doi.org/10.1126/science.336.6077.32
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2012 | Journal Article | IST-REx-ID: 3168
Feret, J., Henzinger, T. A., Koeppl, H., & Petrov, T. (2012). Lumpability abstractions of rule based systems. Theoretical Computer Science, 431, 137–164. https://doi.org/10.1016/j.tcs.2011.12.059
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2012 | Journal Article | IST-REx-ID: 3241
Pietrzak, K. Z., & Wikström, D. (2012). Parallel repetition of computationally sound protocols revisited. Journal of Cryptology, 25(1), 116–135. https://doi.org/10.1007/s00145-010-9090-x
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2012 | Journal Article | IST-REx-ID: 3242 | OA
Konrad, M., Vyleta, M., Theis, F., Stock, M., Tragust, S., Klatt, M., … Cremer, S. (2012). Social transfer of pathogenic fungus promotes active immunisation in ant colonies. PLoS Biology, 10(4). https://doi.org/10.1371/journal.pbio.1001300
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2012 | Journal Article | IST-REx-ID: 3243
Danowski, P. (2012). Zwischen Technologie und Information. Büchereiperspektiven, 1/2012, 11.
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2012 | Journal Article | IST-REx-ID: 3244
Danowski, P. (2012). Die Zeit des Abwartens ist vorbei! BuB – Forum Bibliothek und Information, 64(4), 284.
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2012 | Journal Article | IST-REx-ID: 3245
Behrndt, M., & Heisenberg, C.-P. J. (2012). Spurred by resistance mechanosensation in collective migration. Developmental Cell, 22(1), 3–4. https://doi.org/10.1016/j.devcel.2011.12.018
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2012 | Journal Article | IST-REx-ID: 3246
Barone, V., & Heisenberg, C.-P. J. (2012). Cell adhesion in embryo morphogenesis. Current Opinion in Cell Biology, 24(1), 148–153. https://doi.org/10.1016/j.ceb.2011.11.006
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2012 | Journal Article | IST-REx-ID: 3247
Vilaça, S., Fernandes Redondo, R. A., Lins, L., & Santos, F. (2012). Remaining genetic diversity in Brazilian Merganser (Mergus octosetaceus). Conservation Genetics, 13(1), 293–298. https://doi.org/10.1007/s10592-011-0262-5
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2012 | Journal Article | IST-REx-ID: 3248 | OA
Lampert, C., & Peters, J. (2012). Real-time detection of colored objects in multiple camera streams with off-the-shelf hardware components. Journal of Real-Time Image Processing, 7(1), 31–41. https://doi.org/10.1007/s11554-010-0168-3
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2012 | Journal Article | IST-REx-ID: 3249
Cerny, P., Henzinger, T. A., & Radhakrishna, A. (2012). Simulation distances. Theoretical Computer Science, 413(1), 21–35. https://doi.org/10.1016/j.tcs.2011.08.002
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2012 | Conference Paper | IST-REx-ID: 3250
Pietrzak, K. Z. (2012). Cryptography from learning parity with noise (Vol. 7147, pp. 99–114). Presented at the SOFSEM: Current Trends in Theory and Practice of Computer Science, Špindlerův Mlýn, Czech Republic: Springer. https://doi.org/10.1007/978-3-642-27660-6_9
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2012 | Conference Paper | IST-REx-ID: 3251 | OA
Zufferey, D., Wies, T., & Henzinger, T. A. (2012). Ideal abstractions for well structured transition systems (Vol. 7148, pp. 445–460). Presented at the VMCAI: Verification, Model Checking and Abstract Interpretation, Philadelphia, PA, USA: Springer. https://doi.org/10.1007/978-3-642-27940-9_29
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2012 | Conference Paper | IST-REx-ID: 3252 | OA
Chatterjee, K., & Raman, V. (2012). Synthesizing protocols for digital contract signing (Vol. 7148, pp. 152–168). Presented at the VMCAI: Verification, Model Checking and Abstract Interpretation, Philadelphia, PA, USA: Springer. https://doi.org/10.1007/978-3-642-27940-9_11
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2012 | Conference Paper | IST-REx-ID: 3253
Bouajjani, A., Dragoi, C., Enea, C., & Sighireanu, M. (2012). Abstract domains for automated reasoning about list manipulating programs with infinite data (Vol. 7148, pp. 1–22). Presented at the VMCAI: Verification, Model Checking and Abstract Interpretation, Philadelphia, PA, USA: Springer. https://doi.org/10.1007/978-3-642-27940-9_1
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2012 | Journal Article | IST-REx-ID: 3254
Chatterjee, K. (2012). The complexity of stochastic Müller games. Information and Computation, 211, 29–48. https://doi.org/10.1016/j.ic.2011.11.004
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2012 | Conference Paper | IST-REx-ID: 3255 | OA
Chatterjee, K., & Doyen, L. (2012). Games and Markov decision processes with mean payoff parity and energy parity objectives (Vol. 7119, pp. 37–46). Presented at the MEMICS: Mathematical and Engineering Methods in Computer Science, Lednice, Czech Republic: Springer. https://doi.org/10.1007/978-3-642-25929-6_3
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