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295 Publications
2012 | Journal Article | IST-REx-ID: 3117 |

V. Kolmogorov, “Minimizing a sum of submodular functions,” Discrete Applied Mathematics, vol. 160, no. 15. Elsevier, pp. 2246–2258, 2012.
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2012 | Journal Article | IST-REx-ID: 3118 |

M. Bojsen-Hansen, H. Li, and C. J. Wojtan, “Tracking surfaces with evolving topology,” ACM Transactions on Graphics, vol. 31, no. 4. ACM, 2012.
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2012 | Conference Paper | IST-REx-ID: 3119 |

K. Raveendran, N. Thuerey, C. J. Wojtan, and G. Turk, “Controlling liquids using meshes,” in Proceedings of the ACM SIGGRAPH/Eurographics Symposium on Computer Animation, Aire-la-Ville, Switzerland, 2012, pp. 255–264.
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2012 | Journal Article | IST-REx-ID: 3120 |

G. Brown, M. Kerber, and M. Reid, “Fano 3 folds in codimension 4 Tom and Jerry Part I,” Compositio Mathematica, vol. 148, no. 4. Cambridge University Press, pp. 1171–1194, 2012.
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2012 | Journal Article | IST-REx-ID: 3121 |

C. Williams, W. Chen, C. Lee, D. Yaeger, N. Vyleta, and S. Smith, “Coactivation of multiple tightly coupled calcium channels triggers spontaneous release of GABA,” Nature Neuroscience, vol. 15, no. 9. Nature Publishing Group, pp. 1195–1197, 2012.
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| PubMed | Europe PMC
2012 | Conference Paper | IST-REx-ID: 3123 |

J. Yu, C. J. Wojtan, G. Turk, and C. Yap, “Explicit mesh surfaces for particle based fluids,” in Computer Graphics Forum, Cagliari, Sardinia, Italy, 2012, vol. 31, no. 2, pp. 815–824.
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2012 | Conference Paper | IST-REx-ID: 3125 |

V. Sharmanska, N. Quadrianto, and C. Lampert, “Augmented attribute representations,” presented at the ECCV: European Conference on Computer Vision, Florence, Italy, 2012, vol. 7576, no. PART 5, pp. 242–255.
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2012 | Conference Paper | IST-REx-ID: 3127 |

N. Quadrianto, C. Lampert, and C. Chen, “The most persistent soft-clique in a set of sampled graphs,” in Proceedings of the 29th International Conference on Machine Learning, Edinburgh, United Kingdom, 2012, pp. 211–218.
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2012 | Journal Article | IST-REx-ID: 3128 |

K. Chatterjee, L. Doyen, and T. A. Henzinger, “A survey of partial-observation stochastic parity games,” Formal Methods in System Design, vol. 43, no. 2. Springer, pp. 268–284, 2012.
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2012 | Conference Paper | IST-REx-ID: 3129 |

O. Busaryev, S. Cabello, C. Chen, T. Dey, and Y. Wang, “Annotating simplices with a homology basis and its applications,” presented at the SWAT: Symposium and Workshops on Algorithm Theory, Helsinki, Finland, 2012, vol. 7357, pp. 189–200.
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| arXiv
2012 | Conference Paper | IST-REx-ID: 3134
H. Edelsbrunner, B. Fasy, and G. Rote, “Add isotropic Gaussian kernels at own risk: More and more resilient modes in higher dimensions,” in Proceedings of the twenty-eighth annual symposium on Computational geometry , Chapel Hill, NC, USA, 2012, pp. 91–100.
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2012 | Conference Paper | IST-REx-ID: 3135 |

B. Brázdil, K. Chatterjee, A. Kučera, and P. Novotný, “Efficient controller synthesis for consumption games with multiple resource types,” presented at the CAV: Computer Aided Verification, Berkeley, CA, USA, 2012, vol. 7358, pp. 23–38.
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2012 | Conference Paper | IST-REx-ID: 3155 |

B. Delahaye, U. Fahrenberg, T. A. Henzinger, A. Legay, and D. Nickovic, “Synchronous interface theories and time triggered scheduling,” presented at the FORTE: Formal Techniques for Networked and Distributed Systems & FMOODS: Formal Methods for Open Object-Based Distributed Systems , Stockholm, Sweden, 2012, vol. 7273, pp. 203–218.
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2012 | Journal Article | IST-REx-ID: 3157 |

L. Diaz Jr et al., “The molecular evolution of acquired resistance to targeted EGFR blockade in colorectal cancers,” Nature, vol. 486, no. 7404. Nature Publishing Group, pp. 537–540, 2012.
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2012 | Journal Article | IST-REx-ID: 3158 |

H. Schachtner et al., “Tissue inducible Lifeact expression allows visualization of actin dynamics in vivo and ex vivo,” European Journal of Cell Biology, vol. 91, no. 11–12. Elsevier, pp. 923–929, 2012.
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| PubMed | Europe PMC
2012 | Journal Article | IST-REx-ID: 3159 |

Y. Mileyko, H. Edelsbrunner, C. Price, and J. Weitz, “Hierarchical ordering of reticular networks,” PLoS One, vol. 7, no. 6. Public Library of Science, 2012.
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2012 | Journal Article | IST-REx-ID: 3161 |

M. Vyleta, J. Wong, and B. Magun, “Suppression of ribosomal function triggers innate immune signaling through activation of the NLRP3 inflammasome,” PLoS One, vol. 7, no. 5. Public Library of Science, 2012.
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2012 | Conference Paper | IST-REx-ID: 3162 |

E. Asarin, A. Donzé, O. Maler, and D. Nickovic, “Parametric identification of temporal properties,” presented at the RV: Runtime Verification, San Francisco, CA, United States, 2012, vol. 7186, pp. 147–160.
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2012 | Journal Article | IST-REx-ID: 3130 |

T. Bergmiller, M. Ackermann, and O. Silander, “Patterns of evolutionary conservation of essential genes correlate with their compensability,” PLoS Genetics, vol. 8, no. 6. Public Library of Science, 2012.
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2012 | Journal Article | IST-REx-ID: 3131 |

D. Weissman and N. H. Barton, “Limits to the rate of adaptive substitution in sexual populations,” PLoS Genetics, vol. 8, no. 6. Public Library of Science, 2012.
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2012 | Conference Paper | IST-REx-ID: 3133 |

H. Edelsbrunner and M. Kerber, “Alexander duality for functions: The persistent behavior of land and water and shore,” in Proceedings of the twenty-eighth annual symposium on Computational geometry , Chapel Hill, NC, USA, 2012, pp. 249–258.
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2012 | Journal Article | IST-REx-ID: 3166 |

H. de Vladar, “Amino acid fermentation at the origin of the genetic code,” Biology Direct, vol. 7. BioMed Central, 2012.
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2012 | Journal Article | IST-REx-ID: 3167
M. Weber, “NextGen speaks 13 ,” Science, vol. 336, no. 6077. American Association for the Advancement of Science, pp. 32–34, 2012.
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2012 | Journal Article | IST-REx-ID: 3242 |

M. Konrad et al., “Social transfer of pathogenic fungus promotes active immunisation in ant colonies,” PLoS Biology, vol. 10, no. 4. Public Library of Science, 2012.
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2012 | Journal Article | IST-REx-ID: 3243
P. Danowski, “Zwischen Technologie und Information,” Büchereiperspektiven, vol. 1/2012. Buchereiverband Österreichs, p. 11, 2012.
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2012 | Journal Article | IST-REx-ID: 3244
P. Danowski, “Die Zeit des Abwartens ist vorbei!,” BuB – Forum Bibliothek und Information, vol. 64, no. 4. Bock & Herchen Verlag, p. 284, 2012.
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2012 | Journal Article | IST-REx-ID: 3248 |

C. Lampert and J. Peters, “Real-time detection of colored objects in multiple camera streams with off-the-shelf hardware components,” Journal of Real-Time Image Processing, vol. 7, no. 1. Springer, pp. 31–41, 2012.
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2012 | Journal Article | IST-REx-ID: 3260 |

K. Chatterjee, J. Reiter, and M. Nowak, “Evolutionary dynamics of biological auctions,” Theoretical Population Biology, vol. 81, no. 1. Academic Press, pp. 69–80, 2012.
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2012 | Journal Article | IST-REx-ID: 3262 |

G. Tkačik, A. Walczak, and W. Bialek, “Optimizing information flow in small genetic networks. III. A self-interacting gene,” Physical Review E statistical nonlinear and soft matter physics , vol. 85, no. 4. American Institute of Physics, 2012.
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2012 | Conference Paper | IST-REx-ID: 3279
A. Jain, K. Z. Pietrzak, and A. Tentes, “Hardness preserving constructions of pseudorandom functions,” presented at the TCC: Theory of Cryptography Conference, Taormina, Sicily, Italy, 2012, vol. 7194, pp. 369–382.
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2012 | Conference Paper | IST-REx-ID: 3280 |

K. Z. Pietrzak, “Subspace LWE,” presented at the TCC: Theory of Cryptography Conference, Taormina, Sicily, Italy, 2012, vol. 7194, pp. 548–563.
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2012 | Conference Paper | IST-REx-ID: 3281
K. Z. Pietrzak, A. Rosen, and G. Segev, “Lossy functions do not amplify well,” presented at the TCC: Theory of Cryptography Conference, Taormina, Sicily, Italy, 2012, vol. 7194, pp. 458–475.
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2012 | Conference Paper | IST-REx-ID: 3282 |

Y. Dodis, K. Z. Pietrzak, E. Kiltz, and D. Wichs, “Message authentication, revisited,” presented at the EUROCRYPT: Theory and Applications of Cryptographic Techniques, Cambridge, UK, 2012, vol. 7237, pp. 355–374.
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2012 | Conference Paper | IST-REx-ID: 3284 |

V. Kolmogorov and S. Živný, “The complexity of conservative valued CSPs,” presented at the SODA: Symposium on Discrete Algorithms, 2012, pp. 750–759.
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2012 | Journal Article | IST-REx-ID: 3289 |

A. Pereira et al., “A vaccinia virus-driven interplay between the MKK4/7-JNK1/2 pathway and cytoskeleton reorganization,” Journal of Virology, vol. 86, no. 1. ASM, pp. 172–184, 2012.
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2012 | Journal Article | IST-REx-ID: 3310 |

P. Bendich, S. Cabello, and H. Edelsbrunner, “A point calculus for interlevel set homology,” Pattern Recognition Letters, vol. 33, no. 11. Elsevier, pp. 1436–1444, 2012.
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2012 | Conference Paper | IST-REx-ID: 3251 |

D. Zufferey, T. Wies, and T. A. Henzinger, “Ideal abstractions for well structured transition systems,” presented at the VMCAI: Verification, Model Checking and Abstract Interpretation, Philadelphia, PA, USA, 2012, vol. 7148, pp. 445–460.
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2012 | Conference Paper | IST-REx-ID: 3252 |

K. Chatterjee and V. Raman, “Synthesizing protocols for digital contract signing,” presented at the VMCAI: Verification, Model Checking and Abstract Interpretation, Philadelphia, PA, USA, 2012, vol. 7148, pp. 152–168.
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2012 | Conference Paper | IST-REx-ID: 3253
A. Bouajjani, C. Dragoi, C. Enea, and M. Sighireanu, “Abstract domains for automated reasoning about list manipulating programs with infinite data,” presented at the VMCAI: Verification, Model Checking and Abstract Interpretation, Philadelphia, PA, USA, 2012, vol. 7148, pp. 1–22.
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2012 | Journal Article | IST-REx-ID: 3254
K. Chatterjee, “The complexity of stochastic Müller games,” Information and Computation, vol. 211. Elsevier, pp. 29–48, 2012.
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2012 | Conference Paper | IST-REx-ID: 3255 |

K. Chatterjee and L. Doyen, “Games and Markov decision processes with mean payoff parity and energy parity objectives,” presented at the MEMICS: Mathematical and Engineering Methods in Computer Science, Lednice, Czech Republic, 2012, vol. 7119, pp. 37–46.
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2012 | Journal Article | IST-REx-ID: 3256 |

H. Edelsbrunner and M. Kerber, “Dual complexes of cubical subdivisions of ℝn,” Discrete & Computational Geometry, vol. 47, no. 2. Springer, pp. 393–414, 2012.
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2012 | Journal Article | IST-REx-ID: 3258 |

S. Kim, J. Guzmán, H. Hu, and P. M. Jonas, “Active dendrites support efficient initiation of dendritic spikes in hippocampal CA3 pyramidal neurons,” Nature Neuroscience, vol. 15, no. 4. Nature Publishing Group, pp. 600–606, 2012.
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| PubMed | Europe PMC
2012 | Thesis | IST-REx-ID: 2964
S. Kim, “Active properties of hippocampal CA3 pyramidal neuron dendrites,” IST Austria, 2012.
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2012 | Journal Article | IST-REx-ID: 3257 |

V. Kolmogorov, “Generalized roof duality and bisubmodular functions,” Discrete Applied Mathematics, vol. 160, no. 4–5. Elsevier, pp. 416–426, 2012.
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| arXiv
2012 | Journal Article | IST-REx-ID: 3331 |

M. Kerber and M. Sagraloff, “A worst case bound for topology computation of algebraic curves,” Journal of Symbolic Computation, vol. 47, no. 3. Elsevier, pp. 239–258, 2012.
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2012 | Journal Article | IST-REx-ID: 3317 |

E. Eggermann, I. Bucurenciu, S. Goswami, and P. M. Jonas, “Nanodomain coupling between Ca(2+) channels and sensors of exocytosis at fast mammalian synapses,” Nature Reviews Neuroscience, vol. 13, no. 1. Nature Publishing Group, pp. 7–21, 2012.
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2012 | Journal Article | IST-REx-ID: 3115 |

E. Berberich, D. Halperin, M. Kerber, and R. Pogalnikova, “Deconstructing approximate offsets,” Discrete & Computational Geometry, vol. 48, no. 4. Springer, pp. 964–989, 2012.
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| arXiv
2012 | Journal Article | IST-REx-ID: 347 |

M. Ibáñez et al., “Cu 2ZnGeSe 4 nanocrystals: Synthesis and thermoelectric properties,” Journal of the American Chemical Society, vol. 134, no. 9. ACS, pp. 4060–4063, 2012.
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2012 | Journal Article | IST-REx-ID: 3836
A. Ghosal, D. Iercan, C. Kirsch, T. A. Henzinger, and A. Sangiovanni Vincentelli, “Separate compilation of hierarchical real-time programs into linear-bounded embedded machine code,” Science of Computer Programming, vol. 77, no. 2. Elsevier, pp. 96–112, 2012.
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2012 | Journal Article | IST-REx-ID: 3168
J. Feret, T. A. Henzinger, H. Koeppl, and T. Petrov, “Lumpability abstractions of rule based systems,” Theoretical Computer Science, vol. 431. Elsevier, pp. 137–164, 2012.
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2012 | Journal Article | IST-REx-ID: 3846 |

K. Chatterjee and T. A. Henzinger, “A survey of stochastic ω regular games,” Journal of Computer and System Sciences, vol. 78, no. 2. Elsevier, pp. 394–413, 2012.
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2012 | Journal Article | IST-REx-ID: 2972 |

K. Chatterjee and L. Doyen, “Energy parity games,” Theoretical Computer Science, vol. 458. Elsevier, pp. 49–60, 2012.
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| arXiv
2012 | Journal Article | IST-REx-ID: 387 |

Z. Alpichshev et al., “STM imaging of impurity resonances on Bi 2Se 3,” Physical Review Letters, vol. 108, no. 20. American Physical Society, 2012.
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2012 | Journal Article | IST-REx-ID: 2967
R. Alur, P. Cerny, and S. Weinstein, “Algorithmic analysis of array-accessing programs,” ACM Transactions on Computational Logic (TOCL), vol. 13, no. 3. ACM, 2012.
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2012 | Journal Article | IST-REx-ID: 492 |

T. Galkovskyi et al., “GiA Roots: Software for the high throughput analysis of plant root system architecture,” BMC Plant Biology, vol. 12. BioMed Central, 2012.
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2012 | Journal Article | IST-REx-ID: 493 |

M. Tangermann et al., “Review of the BCI competition IV,” Frontiers in Neuroscience, vol. 6. Frontiers Research Foundation, 2012.
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2012 | Conference Paper | IST-REx-ID: 495 |

A. Kruckman, S. Rubin, J. Sheridan, and B. Zax, “A Myhill Nerode theorem for automata with advice,” in Proceedings GandALF 2012, Napoli, Italy, 2012, vol. 96, pp. 238–246.
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2012 | Conference Paper | IST-REx-ID: 496 |

A. Rabinovich and S. Rubin, “Interpretations in trees with countably many branches,” presented at the LICS: Symposium on Logic in Computer Science, Dubrovnik, Croatia, 2012.
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2012 | Journal Article | IST-REx-ID: 506 |

M. K. Sixt, “Cell migration: Fibroblasts find a new way to get ahead,” Journal of Cell Biology, vol. 197, no. 3. Rockefeller University Press, pp. 347–349, 2012.
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2012 | Journal Article | IST-REx-ID: 498 |

M. Pickup, D. Field, D. Rowell, and A. Young, “Predicting local adaptation in fragmented plant populations: Implications for restoration genetics,” Evolutionary Applications, vol. 5, no. 8. Wiley-Blackwell, pp. 913–924, 2012.
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2012 | Conference Paper | IST-REx-ID: 497 |

K. Chatterjee, S. Chaubal, and P. Kamath, “Faster algorithms for alternating refinement relations,” presented at the EACSL: European Association for Computer Science Logic, Fontainebleau, France, 2012, vol. 16, pp. 167–182.
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2012 | Conference Paper | IST-REx-ID: 2956
K. Chatterjee and Y. Velner, “Mean payoff pushdown games,” in Proceedings of the 2012 27th Annual ACM/IEEE Symposium on Logic in Computer Science, Dubrovnik, Croatia , 2012.
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2012 | Conference Paper | IST-REx-ID: 3165
K. Chatterjee and M. Henzinger, “An O(n2) time algorithm for alternating Büchi games,” in Proceedings of the Annual ACM-SIAM Symposium on Discrete Algorithms, Kyoto, Japan, 2012, pp. 1386–1399.
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2012 | Technical Report | IST-REx-ID: 5377 |

K. Chatterjee and Y. Velner, Mean-payoff pushdown games. IST Austria, 2012.
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2012 | Technical Report | IST-REx-ID: 5378 |

K. Chatterjee, S. Chaubal, and P. Kamath, Faster algorithms for alternating refinement relations. IST Austria, 2012.
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2012 | Conference Paper | IST-REx-ID: 2955 |

K. Chatterjee and L. Doyen, “Partial-observation stochastic games: How to win when belief fails,” in Proceedings of the 2012 27th Annual ACM/IEEE Symposium on Logic in Computer Science, Dubrovnik, Croatia, 2012.
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| arXiv
2012 | Conference Paper | IST-REx-ID: 3341 |

K. Chatterjee, “Robustness of structurally equivalent concurrent parity games,” presented at the FoSSaCS: Foundations of Software Science and Computation Structures, Tallinn, Estonia, 2012, vol. 7213, pp. 270–285.
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| arXiv