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197 Publications


2006 | Journal Article | IST-REx-ID: 3009 | OA
Paciorek, Tomasz, and Jirí Friml. “Auxin Signaling.” Journal of Cell Science 119, no. 7 (2006): 1199–1202. https://doi.org/10.1242/jcs.02910.
View | DOI | Download Published Version (ext.) | PubMed | Europe PMC
 

2006 | Journal Article | IST-REx-ID: 3010
Scarpella, Enrico, Danielle Marcos, Jirí Friml, and Thomas Berleth. “Control of Leaf Vascular Patterning by Polar Auxin Transport.” Genes and Development 20, no. 8 (2006): 1015–27. https://doi.org/10.1101/gad.1402406.
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2006 | Journal Article | IST-REx-ID: 3011
Wiśniewska, Justyna, Jian Xu, Daniela Seifertová, Philip Brewer, Kamil Růžička, Ikram Blilou, David Rouquié, Eva Benková, Ben Scheres, and Jirí Friml. “Polar PIN Localization Directs Auxin Flow in Plants.” Science 312, no. 5775 (2006). https://doi.org/10.1126/science.1121356.
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2006 | Journal Article | IST-REx-ID: 3012
Petrášek, Jan, Jozef Mravec, Rodolphe Bouchard, Joshua Blakeslee, Melinda F Abas, Daniela Seifertová, Justyna Wiśniewska, et al. “PIN Proteins Perform a Rate-Limiting Function in Cellular Auxin Efflux.” Science 312, no. 5775 (2006): 914–18. https://doi.org/10.1126/science.1123542.
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2006 | Journal Article | IST-REx-ID: 3013
Paciorek, Tomasz, Michael Sauer, Jozef Balla, Justyna Wiśniewska, and Jirí Friml. “Immunocytochemical Technique for Protein Localization in Sections of Plant Tissues.” Nature Protocols 1, no. 1 (2006): 104–7. https://doi.org/10.1038/nprot.2006.16.
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2006 | Journal Article | IST-REx-ID: 3014
Brewer, Philip, Marcus Heisler, Jan Hejátko, Jirí Friml, and Eva Benková. “In Situ Hybridization for MRNA Detection in Arabidopsis Tissue Sections.” Nature Protocols 1, no. 3 (2006): 1462–67. https://doi.org/10.1038/nprot.2006.226.
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2006 | Journal Article | IST-REx-ID: 3015
Sauer, Michael, Tomasz Paciorek, Eva Benková, and Jirí Friml. “Immunocytochemical Techniques for Whole Mount in Situ Protein Localization in Plants.” Nature Protocols 1, no. 1 (2006): 98–103. https://doi.org/10.1038/nprot.2006.15.
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2006 | Journal Article | IST-REx-ID: 3016
Sauer, Michael, Jozef Balla, Christian Luschnig, Justyna Wiśniewska, Vilém Reinöhl, Jirí Friml, and Eva Benková. “Canalization of Auxin Flow by Aux/IAA-ARF-Dependent Feedback Regulation of PIN Polarity.” Genes and Development 20, no. 20 (2006): 2902–11. https://doi.org/10.1101/gad.390806.
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2006 | Journal Article | IST-REx-ID: 3017
Tanaka, Hirokazu, Pankaj Dhonukshe, Philip Brewer, and Jirí Friml. “Spatiotemporal Asymmetric Auxin Distribution: A Means to Coordinate Plant Development.” Cellular and Molecular Life Sciences 63, no. 23 (2006): 2738–54. https://doi.org/10.1007/s00018-006-6116-5.
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2006 | Journal Article | IST-REx-ID: 3018
Kleine Vehn, Jürgen, Pankaj Dhonukshe, Ranjan Swarup, Malcolm Bennett, and Jirí Friml. “Subcellular Trafficking of the Arabidopsis Auxin Influx Carrier AUX1 Uses a Novel Pathway Distinct from PIN1.” Plant Cell 18, no. 11 (2006): 3171–81. https://doi.org/10.1105/tpc.106.042770.
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2006 | Journal Article | IST-REx-ID: 3020
Hejátko, Jan, Ikram Blilou, Philip Brewer, Jirí Friml, Ben Scheres, and Eva Benková. “In Situ Hybridization Technique for MRNA Detection in Whole Mount Arabidopsis Samples.” Nature Protocols 1, no. 4 (2006): 1939–46. https://doi.org/10.1038/nprot.2006.333.
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2006 | Journal Article | IST-REx-ID: 3152
Kunwar, Prabhat, Daria E Siekhaus, and Ruth Lehmann. “In Vivo Migration A Germ Cell Perspective.” Annual Review of Cell and Developmental Biology 22 (2006): 237–65. https://doi.org/10.1146/annurev.cellbio.22.010305.103337.
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2006 | Journal Article | IST-REx-ID: 1715
Dudu, Veronika, Thomas Bittig, Eugeni Entchev, Anna Kicheva, Frank Julicher, and Marcos González Gaitán. “Postsynaptic Mad Signaling at the Drosophila Neuromuscular Junction.” Current Biology 16, no. 7 (2006): 625–35. https://doi.org/10.1016/j.cub.2006.02.061.
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2006 | Journal Article | IST-REx-ID: 1716
Dudu, Veronika, Thomas Bittig, Eugeni Entchev, Anna Kicheva, Frank Julicher, and Marcos González Gaitán. “Erratum: Postsynaptic Mad Signaling at the Drosophila Neuromuscular Junction.” Current Biology 16, no. 12 (2006). https://doi.org/10.1016/j.cub.2006.06.020.
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2006 | Journal Article | IST-REx-ID: 1745
Katsaros, Georgios, Armando Rastelli, Mathieu Stoffel, Giovanni Isella, Hans Von Känel, Alexander Bittner, Jerry Tersoff, et al. “Investigating the Lateral Motion of SiGe Islands by Selective Chemical Etching.” Surface Science 600, no. 12 (2006): 2608–13. https://doi.org/10.1016/j.susc.2006.04.027.
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2006 | Journal Article | IST-REx-ID: 1746
Costantini, Giovanni, Armando Rastelli, Carlos Manzano, P Acosta Diaz, Rudeeson Songmuang, Georgios Katsaros, Oliver Schmidt, and Klaus Kern. “Interplay between Thermodynamics and Kinetics in the Capping of InAs/GaAs (001) Quantum Dots.” Physical Review Letters 96, no. 22 (2006). https://doi.org/10.1103/PhysRevLett.96.226106.
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2006 | Journal Article | IST-REx-ID: 1747
Rastelli, Armando, Mathieu Stoffel, Georgios Katsaros, Jerry Tersoff, Ulrich Denker, Tsvetelina Merdzhanova, Gouranga Kar, et al. “Reading the Footprints of Strained Islands.” Microelectronics Journal 37, no. 12 (2006): 1471–76. https://doi.org/10.1016/j.mejo.2006.05.029.
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2006 | Journal Article | IST-REx-ID: 1748
Katsaros, Georgios, Armando Rastelli, Mathieu Stoffel, Giovanni Costantini, Oliver Schmidt, Klaus Kern, Jerry Tersoff, Elisabeth Müller, and Hans Von Känel. “Evolution of Buried Semiconductor Nanostructures and Origin of Stepped Surface Mounds during Capping.” Applied Physics Letters 89, no. 25 (2006). https://doi.org/10.1063/1.2405876.
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2006 | Journal Article | IST-REx-ID: 1796
Siegert, Sandra, Peter Schnierle, and Barbara Schnierle. “Novel Anti-Viral Therapy: Drugs That Block HIV Entry at Different Target Sites.” Mini-Reviews in Medicinal Chemistry 6, no. 5 (2006): 557–62. https://doi.org/10.2174/138955706776876267.
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2006 | Journal Article | IST-REx-ID: 1961
Sazanov, Leonid A, and Philip Hinchliffe. “Structure of the Hydrophilic Domain of Respiratory Complex I from Thermus Thermophilus.” Science 311, no. 5766 (2006): 1430–36. https://doi.org/10.1126/science.1123809.
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2006 | Journal Article | IST-REx-ID: 1966
Hinchliffe, Philip, Joe Carroll, and Leonid A Sazanov. “Identification of a Novel Subunit of Respiratory Complex I from Thermus Thermophilus.” Biochemistry 45, no. 14 (2006): 4413–20. https://doi.org/10.1021/bi0600998.
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2006 | Journal Article | IST-REx-ID: 854
Rogaev, Evgeny, Yuri Moliaka, Boris Malyarchuk, Fyodor Kondrashov, Miroslava Derenko, Ilya Chumakov, and Anastasia Grigorenko. “Complete Mitochondrial Genome and Phylogeny of Pleistocene Mammoth Mammuthus Primigenius.” PLoS Biology 4, no. 3 (2006): 0403–10. https://doi.org/10.1371/journal.pbio.0040073.
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2006 | Journal Article | IST-REx-ID: 868
Kondrashov, Fyodor, Eugene Koonin, Igor Morgunov, Tatiana Finogenova, and Marie Kondrashova. “Evolution of Glyoxylate Cycle Enzymes in Metazoa Evidence of Multiple Horizontal Transfer Events and Pseudogene Formation.” Biology Direct 1 (2006). https://doi.org/10.1186/1745-6150-1-31.
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2006 | Journal Article | IST-REx-ID: 869
Kondrashov, Fyodor, Aleksey Ogurtsov, and Alexey Kondrashov. “Selection in Favor of Nucleotides G and C Diversifies Evolution Rates and Levels of Polymorphism at Mammalian Synonymous Sites.” Journal of Theoretical Biology 240, no. 4 (2006): 616–26. https://doi.org/10.1016/j.jtbi.2005.10.020.
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2006 | Journal Article | IST-REx-ID: 873
Kondrashov, Fyodor, and Alexey Kondrashov. “Role of Selection in Fixation of Gene Duplications.” Journal of Theoretical Biology 239, no. 2 (2006): 141–51. https://doi.org/10.1016/j.jtbi.2005.08.033.
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2006 | Journal Article | IST-REx-ID: 903
Babenko, Vladimir, Malay Basu, Fyodor Kondrashov, Igor Rogozin, and Eugene Koonin. “Signs of Positive Selection of Somatic Mutations in Human Cancers Detected by EST Sequence Analysis.” BMC Cancer 6 (2006). https://doi.org/10.1186/1471-2407-6-36.
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2006 | Journal Article | IST-REx-ID: 1461 | OA
Hausel, Tamas, and Edward Swartz. “Intersection Forms of Toric Hyperkähler Varieties.” Proceedings of the American Mathematical Society 134, no. 8 (2006): 2403–9. https://doi.org/10.1090/S0002-9939-06-08248-7.
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2006 | Journal Article | IST-REx-ID: 1462 | OA
Hausel, Tamas. “Betti Numbers of Holomorphic Symplectic Quotients via Arithmetic Fourier Transform.” PNAS 103, no. 16 (2006): 6120–24. https://doi.org/10.1073/pnas.0601337103.
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2006 | Conference Paper | IST-REx-ID: 3180
Szeliski, Richard, Ramin Zabih, Daniel Scharstein, Olga Veksler, Vladimir Kolmogorov, Aseem Agarwala, Marshall Tappen, and Carsten Rother. “A Comparative Study of Energy Minimization Methods for Markov Random Fields,” 3952:16–29. Springer, 2006. https://doi.org/10.1007/11744047_2.
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2006 | Conference Paper | IST-REx-ID: 3184
Kolmogorov, Vladimir, and Carsten Rother. “Comparison of Energy Minimization Algorithms for Highly Connected Graphs,” 3952 LNCS:1–15. Springer, 2006. https://doi.org/10.1007/11744047_1.
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2006 | Journal Article | IST-REx-ID: 3185
Kolmogorov, Vladimir, Antonio Criminisi, Andrew Blake, Geoffrey Cross, and Carsten Rother. “Probabilistic Fusion of Stereo with Color and Contrast for Bilayer Segmentation.” IEEE Transactions on Pattern Analysis and Machine Intelligence 28, no. 9 (2006): 1480–92. https://doi.org/10.1109/TPAMI.2006.193.
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2006 | Conference Paper | IST-REx-ID: 3186
Boykov, Yuri, Vladimir Kolmogorov, Daniel Cremers, and Andrew Delong. “An Integral Solution to Surface Evolution PDEs via Geo Cuts,” 3953:409–22. Springer, 2006. https://doi.org/10.1007/11744078_32.
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2006 | Conference Paper | IST-REx-ID: 3188
Rother, Carsten, Vladimir Kolmogorov, Thomas Minka, and Andrew Blake. “Cosegmentation of Image Pairs by Histogram Matching - Incorporating a Global Constraint into MRFs,” 993–1000. IEEE, 2006. https://doi.org/10.1109/CVPR.2006.91.
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2006 | Conference Paper | IST-REx-ID: 3189
Criminisi, Antonio, Geoffrey Cross, Andrew Blake, and Vladimir Kolmogorov. “Bilayer Segmentation of Live Video,” 1:53–60. IEEE, 2006. https://doi.org/10.1109/CVPR.2006.69.
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2006 | Journal Article | IST-REx-ID: 3190
Kolmogorov, Vladimir. “Convergent Tree Reweighted Message Passing for Energy Minimization.” IEEE Transactions on Pattern Analysis and Machine Intelligence 28, no. 10 (2006): 1568–83. https://doi.org/10.1109/TPAMI.2006.200.
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2006 | Conference Paper | IST-REx-ID: 3214
Maurer, Ueli, Yvonne Oswald, Krzysztof Z Pietrzak, and Johan Sjödin. “Luby Rackoff Ciphers from Weak Round Functions ,” 4004:391–408. Springer, 2006. https://doi.org/10.1007/11761679_24.
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2006 | Conference Paper | IST-REx-ID: 3215
Dodis, Yevgeniy, Krzysztof Z Pietrzak, and Bartosz Przydatek. “Separating Sources for Encryption and Secret Sharing,” 3876:601–16. Springer, 2006. https://doi.org/10.1007/11681878_31.
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2006 | Conference Paper | IST-REx-ID: 3216
Pietrzak, Krzysztof Z. “A Tight Bound for EMAC,” 4052:168–79. Springer, 2006. https://doi.org/10.1007/11787006_15.
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2006 | Conference Paper | IST-REx-ID: 3217
Pietrzak, Krzysztof Z. “Composition Implies Adaptive Security in Minicrypt,” 4004:328–38. Springer, 2006. https://doi.org/10.1007/11761679_20.
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2006 | Book Chapter | IST-REx-ID: 3404
Janovjak, Harald L, Ravi Sawhney, Martin Stark, and Daniel Mueller. “Atomic Force Microscopy.” In Techniques in Microscopy for Biomedical Applications, 2:213–84. World Scientific Publishing, 2006.
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2006 | Journal Article | IST-REx-ID: 3413
Kessler, Max, Kay Gottschalk, Harald L Janovjak, Daniel Mueller, and Hermann Gaub. “Bacteriorhodopsin Folds into the Membrane against an External Force.” Journal of Molecular Biology 357, no. 2 (2006): 644–54. https://doi.org/10.1016/j.jmb.2005.12.065.
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2006 | Journal Article | IST-REx-ID: 3414
Kedrov, Alexej, Harald L Janovjak, Christine Ziegler, Werner Kühlbrandt, and Daniel Mueller. “Observing Folding Pathways and Kinetics of a Single Sodium-Proton Antiporter from Escherichia Coli.” Journal of Molecular Biology 355, no. 1 (2006): 2–8. https://doi.org/10.1016/j.jmb.2005.10.028.
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2006 | Book Review | IST-REx-ID: 3415
Janovjak, Harald L, Alexej Kedrov, David Cisneros, Tanuj Sapra, Jens Struckmeier, and Daniel Mueller. “Imaging and Detecting Molecular Interactions of Single Membrane Proteins.” Neurobiology of Aging. Elsevier, 2006. https://doi.org/10.1016/j.neurobiolaging.2005.03.031.
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2006 | Preprint | IST-REx-ID: 3431 | OA
Tkacik, Gasper, E. Schneidman, M. Berry, and William Bialek. “Ising Models for Networks of Real Neurons.” ArXiv. ArXiv, 2006.
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2006 | Journal Article | IST-REx-ID: 3437
Betancourt, Andrea, and Jonathan P Bollback. “Fitness Effects of Beneficial Mutations: The Mutational Landscape Model in Experimental Evolution.” Current Opinion in Genetics & Development 16, no. 6 (2006): 618–23. https://doi.org/10.1016/j.gde.2006.10.006.
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2006 | Conference Paper | IST-REx-ID: 3449
Chatterjee, Krishnendu, Rhada Jagadeesan, and Corin Pitcher. “Games for Controls,” 70–82. IEEE, 2006. https://doi.org/10.1109/CSFW.2006.14.
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2006 | Book Review | IST-REx-ID: 3463
Bischofberger, Joseph, Dominique Engel, Michael Frotscher, and Peter M Jonas. “Timing and Efficacy of Transmitter Release at Mossy Fiber Synapses in the Hippocampal Network. (Review).” Pflugers Archiv : European Journal of Physiology. Springer, 2006. https://doi.org/10.1007/s00424-006-0093-2.
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2006 | Conference Paper | IST-REx-ID: 3499
Chatterjee, Krishnendu. “Nash Equilibrium for Upward-Closed Objectives,” 4207:271–86. Springer, 2006. https://doi.org/10.1007/11874683_18.
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2006 | Conference Paper | IST-REx-ID: 3500
Chatterjee, Krishnendu, Thomas A Henzinger, and Nir Piterman. “Algorithms for Büchi Games.” ACM, 2006.
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2006 | Patent | IST-REx-ID: 3510
Edelsbrunner, Herbert, Ping Fu, Dmitry Nekhayev, Michael Facello, and Steven Williams. “Method, Apparatus and Computer Program Products for Automatically Generating NURBS Models of Triangulated Surfaces Using Homeomorphism.” Elsevier, 2006. https://doi.org/US 6,996,505 B1.
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