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198 Publications


2006 | Journal Article | IST-REx-ID: 3935
Chu, Haiyan, et al. “γ-Parvin Is Dispensable for Hematopoiesis, Leukocyte Trafficking, and T-Cell-Dependent Antibody Response.” Molecular and Cellular Biology, vol. 26, no. 5, American Society for Microbiology, 2006, pp. 1817–25, doi:10.1128/MCB.26.5.1817-1825.2006.
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2006 | Journal Article | IST-REx-ID: 3936
Sixt, Michael K., et al. “Β1 Integrins: Zip Codes and Signaling Relay for Blood Cells.” Current Opinion in Cell Biology, vol. 18, no. 5, Elsevier, 2006, pp. 482–90, doi:10.1016/j.ceb.2006.08.007.
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2006 | Journal Article | IST-REx-ID: 3978
Ban, Yih, et al. “Evaluating the Quality of NMR Structures by Local Density of Protons.” Proteins: Structure, Function and Bioinformatics, vol. 62, no. 4, Wiley-Blackwell, 2006, pp. 852–64, doi:10.1002/prot.20811.
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2006 | Journal Article | IST-REx-ID: 3979
Ban, Yih, et al. “Interface Surfaces for Protein-Protein Complexes.” Journal of the ACM, vol. 53, no. 3, ACM, 2006, pp. 361–78, doi:10.1145/1147954.1147957.
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2006 | Journal Article | IST-REx-ID: 3980
Agarwal, Pankaj, et al. “Extreme Elevation on a 2-Manifold.” Discrete & Computational Geometry, vol. 36, no. 4, Springer, 2006, pp. 553–72, doi:10.1007/s00454-006-1265-8.
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2006 | Journal Article | IST-REx-ID: 4140
Witzel, Sabine, et al. “Wnt11 Controls Cell Contact Persistence by Local Accumulation of Frizzled 7 at the Plasma Membrane.” Journal of Cell Biology, vol. 175, no. 5, Rockefeller University Press, 2006, pp. 791–802, doi:10.1083/jcb.200606017.
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2006 | Journal Article | IST-REx-ID: 4145
Tonelli, Davide, et al. “Single-Cell Detection of MicroRNAs in Developing Vertebrate Embryos after Acute Administration of a Dual-Fluorescence Reporter/Sensor Plasmid.” Biotechniques, vol. 41, no. 6, Informa Healthcare, 2006, pp. 727–32, doi:10.2144/000112296.
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2006 | Journal Article | IST-REx-ID: 4173 | OA
Link, Vinzenz, et al. “Proteomics of Early Zebrafish Embryos.” BMC Developmental Biology, vol. 6, BioMed Central, 2006, pp. 1–9, doi:10.1186/1471-213X-6-1.
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2006 | Journal Article | IST-REx-ID: 4176
Link, Vinzenz, et al. “Identification of Regulators of Germ Layer Morphogenesis Using Proteomics in Zebrafish.” Journal of Cell Science, vol. 119, no. 10, Company of Biologists, 2006, pp. 2073–83, doi:10.1242/jcs.02928.
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2006 | Journal Article | IST-REx-ID: 4178
Langenberg, Tobias, et al. “Analysis and Visualization of Cell Movement in the Developing Zebrafish Brain.” Developmental Dynamics, vol. 235, no. 4, Wiley-Blackwell, 2006, pp. 928–33, doi:10.1002/dvdy.20692.
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2006 | Journal Article | IST-REx-ID: 4184
Köppen, Mathias, et al. “Coordinated Cell-Shape Changes Control Epithelial Movement in Zebrafish and Drosophila.” Development, vol. 133, no. 14, Company of Biologists, 2006, pp. 2671–81, doi:doi: 10.1242/dev.02439.
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2006 | Journal Article | IST-REx-ID: 4218
Blaser, Heiko, et al. “Migration of Zebrafish Primordial Germ Cells: A Role for Myosin Contraction and Cytoplasmic Flow.” Developmental Cell, vol. 11, no. 5, Cell Press, 2006, pp. 613–27, doi:10.1016/j.devcel.2006.09.023.
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2006 | Journal Article | IST-REx-ID: 4235
de Vladar, Harold, and J. González. “Dynamic Response of Cancer under the Influence of Immunological Activity and Therapy.” Journal of Theoretical Biology, Elsevier, 2006, pp. 91–109.
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2006 | Journal Article | IST-REx-ID: 4237
de Vladar, Harold. “Density-Dependence as a Size-Independent Regulatory Mechanism.” Journal of Theoretical Biology, vol. 238, no. 2, Elsevier, 2006, pp. 245–56, doi:3802.
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2006 | Journal Article | IST-REx-ID: 4248
Roze, Denis, and Nicholas H. Barton. “The Hill-Robertson Effect and the Evolution of Recombination.” Genetics, vol. 173, no. 3, Genetics Society of America, 2006, pp. 1793–811, doi:10.1534/genetics.106.058586 .
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2006 | Book Review | IST-REx-ID: 4250
Barton, Nicholas H. “Evolutionary Biology: How Did the Human Species Form?” Current Biology, vol. 16, no. 16, Cell Press, 2006, pp. 647–50, doi:10.1016/j.cub.2006.07.032.
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2006 | Journal Article | IST-REx-ID: 4345
Danowski, Patrick, and Lambert Heller. “Bibliothek 2.0 - Die Bibliothek Der Zukunft?” Bibliotheksdienst, vol. 40, no. 11, Zentral- und Landesbibliothek Berlin, 2006, pp. 1250–71, doi:424.
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2006 | Journal Article | IST-REx-ID: 4351
Bollback, Jonathan P. “SIMMAP: Stochastic Character Mapping of Discrete Traits on Phylogenies.” BMC Bioinformatics, vol. 7, BioMed Central, 2006, doi:10.1186/1471-2105-7-88.
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2006 | Journal Article | IST-REx-ID: 4352
Conn, Jan, et al. “Population Structure of the Malaria Vector Anopheles Darlingi in a Malaria-Endemic Region of Eastern Amazonian Brazil.” The American Journal of Tropical Medicine and Hygiene, vol. 74, no. 5, American Society of Tropical Medicine and Hygiene, 2006, pp. 798–806.
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2006 | Conference Paper | IST-REx-ID: 4359
Wies, Thomas, et al. Field Constraint Analysis. Springer, 2006, pp. 157–73, doi:1551.
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2006 | Conference Paper | IST-REx-ID: 4373
Maler, Oded, et al. Real Time Temporal Logic: Past, Present, Future. Springer, 2006, pp. 2–16, doi:1571.
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2006 | Conference Paper | IST-REx-ID: 4374
Maler, Oded, et al. From MITL to Timed Automata. Springer, 2006, pp. 274–89, doi:1570.
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2006 | Conference Paper | IST-REx-ID: 4401
Alur, Rajeev, et al. Preserving Secrecy Under Refinement. Springer, 2006, pp. 107–18, doi:1543.
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2006 | Conference Paper | IST-REx-ID: 4406
De Wulf, Martin, et al. Antichains: A New Algorithm for Checking Universality of Finite Automata. Vol. 4144, Springer, 2006, pp. 17–30, doi:10.1007/11817963_5.
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2006 | Conference Paper | IST-REx-ID: 4431
Henzinger, Thomas A., and Joseph Sifakis. The Embedded Systems Design Challenge. Vol. 4085, Springer, 2006, pp. 1–15, doi:10.1007/11813040_1.
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2006 | Conference Paper | IST-REx-ID: 4432
Henzinger, Thomas A., and Vinayak Prabhu. Timed Alternating-Time Temporal Logic. Vol. 4202, Springer, 2006, pp. 1–17, doi:10.1007/11867340_1.
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2006 | Conference Paper | IST-REx-ID: 4436
Henzinger, Thomas A., and Slobodan Matic. An Interface Algebra for Real-Time Components. IEEE, 2006, pp. 253–66, doi:10.1109/RTAS.2006.11.
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2006 | Conference Paper | IST-REx-ID: 4437
Henzinger, Thomas A., and Nir Piterman. Solving Games without Determinization. Vol. 4207, Springer, 2006, pp. 395–410, doi:10.1007/11874683_26.
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2006 | Journal Article | IST-REx-ID: 4451
Henzinger, Thomas A., et al. “On the Universal and Existential Fragments of the Mu-Calculus.” Theoretical Computer Science, vol. 354, no. 2, Elsevier, 2006, pp. 173–86, doi:10.1016/j.tcs.2005.11.015.
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2006 | Conference Paper | IST-REx-ID: 4523
Gulavani, Bhargav, et al. Synergy: A New Algorithm for Property Checking. ACM, 2006, pp. 117–27, doi:10.1145/1181775.1181790.
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2006 | Conference Paper | IST-REx-ID: 4526
Ghosal, Arkadeb, et al. A Hierarchical Coordination Language for Interacting Real-Time Tasks. ACM, 2006, pp. 132–41, doi:10.1145/1176887.1176907.
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2006 | Conference Paper | IST-REx-ID: 4528
Fisher, Jasmin, and Thomas A. Henzinger. Executable Biology. IEEE, 2006, pp. 1675–82, doi:10.1109/WSC.2006.322942.
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2006 | Conference Paper | IST-REx-ID: 4538
Chatterjee, Krishnendu, and Thomas A. Henzinger. Strategy Improvement and Randomized Subexponential Algorithms for Stochastic Parity Games. Vol. 3884, Springer, 2006, pp. 512–23, doi:10.1007/11672142_42.
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2006 | Conference Paper | IST-REx-ID: 4539
Chatterjee, Krishnendu, and Thomas A. Henzinger. Finitary Winning in Omega-Regular Games. Vol. 3920, Springer, 2006, pp. 257–71, doi:10.1007/11691372_17.
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2006 | Conference Paper | IST-REx-ID: 4549
Chatterjee, Krishnendu, et al. Compositional Quantitative Reasoning. IEEE, 2006, pp. 179–88, doi:10.1109/QEST.2006.11.
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2006 | Journal Article | IST-REx-ID: 4550
Chatterjee, Krishnendu, et al. “Games with Secure Equilibria.” Theoretical Computer Science, vol. 365, no. 1–2, Elsevier, 2006, pp. 67–82, doi:10.1016/j.tcs.2006.07.032.
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2006 | Conference Paper | IST-REx-ID: 4551
Chatterjee, Krishnendu, et al. Markov Decision Processes with Multiple Objectives. Vol. 3884, Springer, 2006, pp. 325–36, doi:10.1007/11672142_26.
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2006 | Conference Paper | IST-REx-ID: 4552
Chatterjee, Krishnendu, et al. Strategy Improvement for Concurrent Reachability Games. IEEE, 2006, pp. 291–300, doi:10.1109/QEST.2006.48.
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2006 | Conference Paper | IST-REx-ID: 4574
Beyer, Dirk, et al. Lazy Shape Analysis. Vol. 4144, Springer, 2006, pp. 532–46, doi:10.1007/11817963_48.
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2006 | Book Chapter | IST-REx-ID: 3002
Sauer, Michael, and Jiří Friml. “In Vitro Culture of Arabidopsis Embryos.” Somatic Embryogenesis, edited by Abdul Mujib and Jozef Šamaj, vol. 2, Springer, 2006, pp. 343–54, doi:10.1007/7089_020.
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2006 | Journal Article | IST-REx-ID: 3005
Friml, Jiří, et al. “Apical-Basal Polarity: Why Plant Cells Don’t Stand on Their Heads.” Trends in Plant Science, vol. 11, no. 1, Cell Press, 2006, pp. 12–14, doi:10.1016/j.tplants.2005.11.010.
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2006 | Journal Article | IST-REx-ID: 3006
Dhonukshe, Pankaj, et al. “Endocytosis of Cell Surface Material Mediates Cell Plate Formation during Plant Cytokinesis.” Developmental Cell, vol. 10, no. 1, Cell Press, 2006, pp. 137–50, doi:10.1016/j.devcel.2005.11.015.
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2006 | Journal Article | IST-REx-ID: 3007
Abas, Lindy, et al. “Intracellular Trafficking and Proteolysis of the Arabidopsis Auxin-Efflux Facilitator PIN2 Are Involved in Root Gravitropism.” Nature Cell Biology, vol. 8, no. 3, Nature Publishing Group, 2006, pp. 249–56, doi:10.1038/ncb1369.
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2006 | Journal Article | IST-REx-ID: 3008
Xu, Jian, et al. “A Molecular Framework for Plant Regeneration.” Science, vol. 311, no. 5759, American Association for the Advancement of Science, 2006, pp. 385–88, doi:10.1126/science.1121790.
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2006 | Journal Article | IST-REx-ID: 3009 | OA
Paciorek, Tomasz, and Jiří Friml. “Auxin Signaling.” Journal of Cell Science, vol. 119, no. 7, Company of Biologists, 2006, pp. 1199–202, doi:10.1242/jcs.02910.
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2006 | Journal Article | IST-REx-ID: 3010
Scarpella, Enrico, et al. “Control of Leaf Vascular Patterning by Polar Auxin Transport.” Genes and Development, vol. 20, no. 8, Cold Spring Harbor Laboratory Press, 2006, pp. 1015–27, doi:10.1101/gad.1402406.
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2006 | Journal Article | IST-REx-ID: 3011
Wiśniewska, Justyna, et al. “Polar PIN Localization Directs Auxin Flow in Plants.” Science, vol. 312, no. 5775, American Association for the Advancement of Science, 2006, doi:10.1126/science.1121356.
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2006 | Journal Article | IST-REx-ID: 3012
Petrášek J, Mravec J, Bouchard R, Blakeslee J, Abas MF, Seifertová D, Wiśniewska J, Tadele Z, Kubeš M, Čovanová M, Dhonukshe P, Skůpa P, Benková E, Perry L, Křeček P, Lee O, Fink G, Geisler M, Murphy A, Luschnig C, Zažímalová E, Friml J. 2006. PIN proteins perform a rate-limiting function in cellular auxin efflux. Science. 312(5775), 914–918.
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2006 | Journal Article | IST-REx-ID: 3013
Paciorek, Tomasz, et al. “Immunocytochemical Technique for Protein Localization in Sections of Plant Tissues.” Nature Protocols, vol. 1, no. 1, Nature Publishing Group, 2006, pp. 104–07, doi:10.1038/nprot.2006.16.
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2006 | Journal Article | IST-REx-ID: 3014
Brewer, Philip, et al. “In Situ Hybridization for MRNA Detection in Arabidopsis Tissue Sections.” Nature Protocols, vol. 1, no. 3, Nature Publishing Group, 2006, pp. 1462–67, doi:10.1038/nprot.2006.226.
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