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191 Publications


2006 | Journal Article | IST-REx-ID: 3811 View | DOI
 

2006 | Journal Article | IST-REx-ID: 3912
Attack of the invasive garden ant: aggression behaviour of Lasius neglectus (Hymenoptera: Formicidae) against native Lasius species in Spain
S. Cremer, L.V. Ugelvig, S. Lommen, K. Petersen, J. Pedersen, Myrmecological News 9 (2006) 13–19.
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2006 | Journal Article | IST-REx-ID: 3936
β1 integrins: zip codes and signaling relay for blood cells
M.K. Sixt, M. Bauer, T. Lämmermann, R. Fässler, Current Opinion in Cell Biology 18 (2006) 482–490.
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2006 | Journal Article | IST-REx-ID: 3979
Interface surfaces for protein-protein complexes
Y. Ban, H. Edelsbrunner, J. Rudolph, Journal of the ACM 53 (2006) 361–378.
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2006 | Journal Article | IST-REx-ID: 4218
Migration of zebrafish primordial germ cells: A role for myosin contraction and cytoplasmic flow
H. Blaser, M. Reichman Fried, I. Castanon, K. Dumstrei, F. Marlow, K. Kawakami, L. Solnica Krezel, C. Heisenberg, E. Raz, Developmental Cell 11 (2006) 613–627.
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2006 | Journal Article | IST-REx-ID: 4237
Density-dependence as a size-independent regulatory mechanism
H. De Vladar, Journal of Theoretical Biology 238 (2006) 245–256.
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2006 | Journal Article | IST-REx-ID: 4345
Bibliothek 2.0 - Die Bibliothek der Zukunft?
P. Danowski, L. Heller, Bibliotheksdienst 40 (2006) 1250–1271.
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2006 | Journal Article | IST-REx-ID: 4352
Population structure of the malaria vector Anopheles darlingi in a malaria-endemic region of eastern Amazonian Brazil
J. Conn, J. Vineis, J.P. Bollback, D. Onyabe, R. Wilkerson, M. Povoa, The American Journal of Tropical Medicine and Hygiene 74 (2006) 798–806.
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2006 | Conference Paper | IST-REx-ID: 4523
Synergy: A new algorithm for property checking
B. Gulavani, T.A. Henzinger, Y. Kannan, A. Nori, S. Rajamani, in:, ACM, 2006, pp. 117–127.
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2006 | Conference Paper | IST-REx-ID: 4528
Executable biology
J. Fisher, T.A. Henzinger, in:, IEEE, 2006, pp. 1675–1682.
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2006 | Journal Article | IST-REx-ID: 6151   OA View | DOI | Download (ext.) | PubMed | Europe PMC
 

2006 | Journal Article | IST-REx-ID: 854
Complete mitochondrial genome and phylogeny of pleistocene mammoth Mammuthus primigenius
E. Rogaev, Y. Moliaka, B. Malyarchuk, F. Kondrashov, M. Derenko, I. Chumakov, A. Grigorenko, PLoS Biology 4 (2006) 0403–0410.
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2006 | Journal Article | IST-REx-ID: 873
Role of selection in fixation of gene duplications
F. Kondrashov, A. Kondrashov, Journal of Theoretical Biology 239 (2006) 141–151.
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2006 | Journal Article | IST-REx-ID: 7332
In-plane effects in large-scale PEMFCs
S.A. Freunberger, M. Santis, I.A. Schneider, A. Wokaun, F.N. Büchi, Journal of The Electrochemical Society 153 (2006) A396.
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2006 | Journal Article | IST-REx-ID: 1462   OA View | DOI | Download (ext.)
 

2006 | Journal Article | IST-REx-ID: 1746
Interplay between thermodynamics and kinetics in the capping of InAs/GaAs (001) quantum dots
G. Costantini, A. Rastelli, C. Manzano, P. Acosta Diaz, R. Songmuang, G. Katsaros, O. Schmidt, K. Kern, Physical Review Letters 96 (2006).
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2006 | Journal Article | IST-REx-ID: 1715
Postsynaptic mad signaling at the Drosophila neuromuscular junction
V. Dudu, T. Bittig, E. Entchev, A. Kicheva, F. Julicher, M. González Gaitán, Current Biology 16 (2006) 625–635.
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2006 | Journal Article | IST-REx-ID: 1796
Novel anti-viral therapy: Drugs that block HIV entry at different target sites
S. Siegert, P. Schnierle, B. Schnierle, Mini-Reviews in Medicinal Chemistry 6 (2006) 557–562.
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2006 | Journal Article | IST-REx-ID: 2066
Evolution on the X chromosome: Unusual patterns and processes
B. Vicoso, B. Charlesworth, Nature Reviews Genetics 7 (2006) 645–653.
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2006 | Journal Article | IST-REx-ID: 216
Counting rational points on algebraic varieties
T.D. Browning, R. Heath Brown, P. Salberger, Duke Mathematical Journal 132 (2006) 545–578.
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2006 | Conference Paper | IST-REx-ID: 2333   OA
Ground-state energy of a dilute Fermi gas
É. Lieb, R. Seiringer, J. Solovej, in:, American Mathematical Society, 2006, pp. 239–248.
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2006 | Journal Article | IST-REx-ID: 2364   OA
A correlation estimate for quantum many-body systems at positive temperature
R. Seiringer, Reviews in Mathematical Physics 18 (2006) 233–253.
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2006 | Book Chapter | IST-REx-ID: 2369   OA
Bose-Einstein condensation as a quantum phase transition in an optical lattice
M. Aizenman, É. Lieb, R. Seiringer, J. Solovej, J. Yngvason, in:, J. Asch, A. Joye (Eds.), Mathematical Physics of Quantum Mechanics, Springer, 2006, pp. 199–215.
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2006 | Journal Article | IST-REx-ID: 2662
Compartment-dependent colocalization of Kir3.2-containing K+ channels and GABAB receptors in hippocampal pyramidal cells
Á. Kulik, I. Vida, Y. Fukazawa, N. Guetg, Y. Kasugai, C. Marker, F. Rigato, B. Bettler, K. Wickman, M. Frotscher, R. Shigemoto, Journal of Neuroscience 26 (2006) 4289–4297.
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2006 | Book Chapter | IST-REx-ID: 3002
In vitro culture of Arabidopsis embryos
M. Sauer, J. Friml, in:, A. Mujib, J. Šamaj (Eds.), Somatic Embryogenesis, Springer, 2006, pp. 343–354.
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2006 | Journal Article | IST-REx-ID: 3007
Intracellular trafficking and proteolysis of the Arabidopsis auxin-efflux facilitator PIN2 are involved in root gravitropism
L. Abas, R. Benjamins, N. Malenica, T. Paciorek, J. Wiśniewska, J. Moulinier Anzola, T. Sieberer, J. Friml, C. Luschnig, Nature Cell Biology 8 (2006) 249–256.
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2006 | Journal Article | IST-REx-ID: 3014
In situ hybridization for mRNA detection in Arabidopsis tissue sections
P. Brewer, M. Heisler, J. Hejátko, J. Friml, E. Benková, Nature Protocols 1 (2006) 1462–1467.
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2006 | Conference Paper | IST-REx-ID: 3184
Comparison of energy minimization algorithms for highly connected graphs
V. Kolmogorov, C. Rother, in:, Springer, 2006, pp. 1–15.
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2006 | Conference Paper | IST-REx-ID: 3189
Bilayer segmentation of live video
A. Criminisi, G. Cross, A. Blake, V. Kolmogorov, in:, IEEE, 2006, pp. 53–60.
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2006 | Conference Paper | IST-REx-ID: 3216
A tight bound for EMAC
K.Z. Pietrzak, in:, Springer, 2006, pp. 168–179.
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2006 | Journal Article | IST-REx-ID: 3728
Pulling single bacteriorhodopsin out of a membrane: Comparison of simulation and experiment
M. Cieplak, S. Filipek, H.L. Janovjak, K. Krzysko, Biochimica et Biophysica Acta (BBA) - Biomembranes 1758 (2006) 537–544.
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2006 | Journal Article | IST-REx-ID: 3413
Bacteriorhodopsin folds into the membrane against an external force
M. Kessler, K. Gottschalk, H.L. Janovjak, D. Mueller, H. Gaub, Journal of Molecular Biology 357 (2006) 644–654.
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2006 | Journal Article | IST-REx-ID: 3437
Fitness effects of beneficial mutations: the mutational landscape model in experimental evolution
A. Betancourt, J.P. Bollback, Current Opinion in Genetics & Development 16 (2006) 618–623.
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2006 | Conference Paper | IST-REx-ID: 3449
Games for controls
K. Chatterjee, R. Jagadeesan, C. Pitcher, in:, IEEE, 2006, pp. 70–82.
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2006 | Book Review | IST-REx-ID: 3463
Timing and efficacy of transmitter release at mossy fiber synapses in the hippocampal network. (Review)
J. Bischofberger, D. Engel, M. Frotscher, P.M. Jonas, Pflugers Archiv : European Journal of Physiology 453 (2006) 361–372.
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2006 | Journal Article | IST-REx-ID: 3608
Chromosome inversions, local adaptation, and speciation
M. Kirkpatrick, N.H. Barton, Genetics 173 (2006) 419–434.
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2006 | Journal Article | IST-REx-ID: 3610
Prediction of effects of genetic drift on variance components under a general model of epistasis
W. Hill, N.H. Barton, M. Turelli, Theoretical Population Biology 70 (2006) 56–62.
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2006 | Conference Paper | IST-REx-ID: 3677
Spatiogram-based shot distances for video retrieval
A. Ulges, C. Lampert, D. Keysers, in:, NIST (National Institute of Standards and Technology, US Department of Commerce), 2006, pp. 1–10.
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2006 | Journal Article | IST-REx-ID: 3545
Changes in functional connectivity within the rat striatopallidal axis during global brain activation in vivo
P. Magill, A. Pogosyan, A. Sharott, J.L. Csicsvari, J. Bolam, P. Brown, Journal of Neuroscience 26 (2006) 6318–6329.
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2006 | Conference Paper | IST-REx-ID: 3499
Nash equilibrium for upward-closed objectives
K. Chatterjee, in:, Springer, 2006, pp. 271–286.
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2006 | Journal Article | IST-REx-ID: 3817
The most important recent advances in synapse research from my point of view--and what remains to be done
M. Frotscher, E. Gundelfinger, P.M. Jonas, E. Neher, P. Seeburg, Cell and Tissue Research 326 (2006) 203–4.
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2006 | Journal Article | IST-REx-ID: 3913
Stealthy invaders: the biology of Cardiocondyla tramp ants
J. Heinze, S. Cremer, N. Eckl, A. Schrempf, Insectes Sociaux 53 (2006) 1–7.
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2006 | Journal Article | IST-REx-ID: 3932 View | DOI
 

2006 | Conference Paper | IST-REx-ID: 4574
Lazy shape analysis
D. Beyer, T.A. Henzinger, G. Théoduloz, in:, Springer, 2006, pp. 532–546.
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2006 | Journal Article | IST-REx-ID: 4550
Games with secure equilibria
K. Chatterjee, T.A. Henzinger, M. Jurdziński, Theoretical Computer Science 365 (2006) 67–82.
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2006 | Conference Paper | IST-REx-ID: 583
Improved single-photon detection
R. Rangarajan, N. Peters, O. Hosten, J. Altepeter, E. Jeffrey, P. Kwiat, in:, IEEE, 2006.
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2006 | Journal Article | IST-REx-ID: 6152
Behavioral motifs and neural pathways coordinating O2 responses and aggregation in C. elegans
C. Rogers, A. Persson, B. Cheung, M. de Bono, Current Biology 16 (2006) 649–659.
View | DOI | PubMed | Europe PMC
 

2006 | Conference Paper | IST-REx-ID: 7326
What is learned beyond the scale of single cells?
F.N. Büchi, S.A. Freunberger, M. Santis, in:, ECS Transactions, ECS, 2006, pp. 963–968.
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2006 | Journal Article | IST-REx-ID: 1033   OA
Evidence for Efimov quantum states in an ultracold gas of caesium atoms
T. Kraemer, M. Mark, P. Waldburger, J. Danzl, C. Chin, B. Engeser, A. Lange, K. Pilch, A. Jaakkola, H. Nägerl, R. Grimm, Nature 440 (2006) 315–318.
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2006 | Journal Article | IST-REx-ID: 1716
Erratum: Postsynaptic mad signaling at the Drosophila neuromuscular junction
V. Dudu, T. Bittig, E. Entchev, A. Kicheva, F. Julicher, M. González Gaitán, Current Biology 16 (2006).
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2006 | Journal Article | IST-REx-ID: 1747
Reading the footprints of strained islands
A. Rastelli, M. Stoffel, G. Katsaros, J. Tersoff, U. Denker, T. Merdzhanova, G. Kar, G. Costantini, K. Kern, H. Von Känel, O. Schmidt, Microelectronics Journal 37 (2006) 1471–1476.
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2006 | Journal Article | IST-REx-ID: 2144
Temperature dependent XAFS studies of local atomic structure of the perovskite-type zirconates
R. Vedrinskiǐ, E. Nazarenko, M. Lemeshko, V. Nassif, O. Proux, A. Novakovich, Y. Joly, Physical Review B - Condensed Matter and Materials Physics 73 (2006).
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2006 | Journal Article | IST-REx-ID: 2663
A CaV2.1 calcium channel mutation rocker reduces the number of postsynaptic AMPA receptors in parallel fiber-Purkinje cell synapses
T. Kodama, Y. Itsukaichi Nishida, Y. Fukazawa, M. Wakamori, M. Miyata, E. Molnár, Y. Mori, R. Shigemoto, K. Imoto, European Journal of Neuroscience 24 (2006) 2993–3007.
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2006 | Conference Paper | IST-REx-ID: 2334   OA
One-dimensional behavior of dilute, trapped Bose gases in traps
R. Seiringer, É. Lieb, J. Yngvason, in:, J. Zambrini (Ed.), World Scientific Publishing, 2006.
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2006 | Journal Article | IST-REx-ID: 2365   OA
The thermodynamic pressure of a dilute fermi gas
R. Seiringer, Communications in Mathematical Physics 261 (2006) 729–757.
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2006 | Book Chapter | IST-REx-ID: 2416
On six problems posed by Jarik Nešetřil
J. Bang Jensen, B. Reed, B. Schacht, R. Šámal, B. Toft, U. Wagner, in:, Topics in Discrete Mathematics, Springer, 2006, pp. 613–627.
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2006 | Journal Article | IST-REx-ID: 2745
Gross-Pitaevskii equation as the mean field limit of weakly coupled bosons
A. Elgart, L. Erdös, B. Schlein, H. Yau, Archive for Rational Mechanics and Analysis 179 (2006) 265–283.
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2006 | Journal Article | IST-REx-ID: 2430
Online conflict-free coloring for intervals
K. Chent, A. Fiat, H. Kaplan, M. Levy, J. Matoušek, E. Mossel, J. Pach, M. Sharir, S. Smorodinsky, U. Wagner, E. Welzl, SIAM Journal on Computing 36 (2006) 1342–1359.
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2006 | Journal Article | IST-REx-ID: 3008
A molecular framework for plant regeneration
J. Xu, H. Hofhuis, R. Heidstra, M. Sauer, J. Friml, B. Scheres, Science 311 (2006) 385–388.
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2006 | Journal Article | IST-REx-ID: 3010
Control of leaf vascular patterning by polar auxin transport
E. Scarpella, D. Marcos, J. Friml, T. Berleth, Genes and Development 20 (2006) 1015–1027.
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2006 | Journal Article | IST-REx-ID: 3015
Immunocytochemical techniques for whole mount in situ protein localization in plants
M. Sauer, T. Paciorek, E. Benková, J. Friml, Nature Protocols 1 (2006) 98–103.
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2006 | Conference Paper | IST-REx-ID: 3180
A comparative study of energy minimization methods for Markov random fields
R. Szeliski, R. Zabih, D. Scharstein, O. Veksler, V. Kolmogorov, A. Agarwala, M. Tappen, C. Rother, in:, Springer, 2006, pp. 16–29.
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2006 | Journal Article | IST-REx-ID: 3185
Probabilistic fusion of stereo with color and contrast for bilayer segmentation
V. Kolmogorov, A. Criminisi, A. Blake, G. Cross, C. Rother, IEEE Transactions on Pattern Analysis and Machine Intelligence 28 (2006) 1480–1492.
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2006 | Conference Paper | IST-REx-ID: 3217
Composition implies adaptive security in minicrypt
K.Z. Pietrzak, in:, Springer, 2006, pp. 328–338.
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2006 | Journal Article | IST-REx-ID: 3414
Observing folding pathways and kinetics of a single sodium-proton antiporter from Escherichia coli
A. Kedrov, H.L. Janovjak, C. Ziegler, W. Kühlbrandt, D. Mueller, Journal of Molecular Biology 355 (2006) 2–8.
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2006 | Journal Article | IST-REx-ID: 3729
Direct measurement of single-molecule visco-elasticity in atomic force microscope force-extension experiments
C. Bippes, A. Humphris, M. Stark, D. Mueller, H.L. Janovjak, European Biophysics Journal 35 (2006) 287–292.
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2006 | Journal Article | IST-REx-ID: 3750
Protein expression enhancement in efflux-deleted mutant bacteria
T. Le, C.C. Guet, P. Cluzel, Protein Expression and Purification 48 (2006) 28–31.
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2006 | Journal Article | IST-REx-ID: 3755   OA
Dynamical determinants of drug-inducible gene expression in a single bacterium
T. Le, T. Emonet, S. Harlepp, C.C. Guet, P. Cluzel, Biophysical Journal 90 (2006) 3315–3321.
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2006 | Journal Article | IST-REx-ID: 3767
Determinants of simulated RNA evolution.
A. Kupczok, P. Dittrich, Journal of Theoretical Biology 238 (2006) 726–35.
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2006 | Journal Article | IST-REx-ID: 3609
Hybridization of Bombina bombina and B. variegata (Anura, Discoglossidae) at a sharp ecotone in western Ukraine: comparisons across transects and over time
A. Yanchukov, S. Hofman, J. Szymura, S. Mezhzherin, S. Morozov Leonov, N.H. Barton, B. Nürnberger, Evolution; International Journal of Organic Evolution 60 (2006) 583–600.
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2006 | Conference Paper | IST-REx-ID: 3680
Printing technique classification for document counterfeit detection
C. Lampert, L. Mei, T. Breuel, in:, IEEE, 2006, pp. 639–634.
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2006 | Patent | IST-REx-ID: 3510 View | DOI | Download (ext.)
 

2006 | Journal Article | IST-REx-ID: 3522 View | DOI
 

2006 | Conference Paper | IST-REx-ID: 3560
Persistence-sensitive simplification of functions on 2-manifolds
H. Edelsbrunner, D. Morozov, V. Pascucci, in:, ACM, 2006, pp. 127–134.
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2006 | Journal Article | IST-REx-ID: 3813   OA
Hyperpolarization-activated cation channels in fast-spiking interneurons of rat hippocampus
Y. Aponte, C. Lien, E. Reisinger, P.M. Jonas, Journal of Physiology 574 (2006) 229–43.
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2006 | Journal Article | IST-REx-ID: 3818
Patch-clamp recording from mossy fiber terminals in hippocampal slices
J. Bischofberger, D. Engel, L. Li, J. Geiger, P.M. Jonas, Nature Protocols 1 (2006) 2075–81.
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2006 | Conference Paper | IST-REx-ID: 3685
Machine learning for video compression: Macroblock mode decision
C. Lampert, in:, IEEE, 2006, pp. 936–940.
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2006 | Conference Paper | IST-REx-ID: 3692
Color image dequantization by constrained diffusion
D. Keysers, C. Lampert, T. Breuel, in:, SPIE, 2006.
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2006 | Journal Article | IST-REx-ID: 3914
Optimal species distinction by discriminant analysis: comparing established methods of character selection with a combination procedure using ant morphometrics as a case study
K. Moder, B. Schlick Steiner, F. Steiner, S. Cremer, E. Christian, B. Seifert, Journal of Zoological Systematics and Evolutionary Research 45 (2006) 82–87.
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2006 | Journal Article | IST-REx-ID: 4140
Wnt11 controls cell contact persistence by local accumulation of Frizzled 7 at the plasma membrane
S. Witzel, V. Zimyanin, F. Carreira Barbosa, M. Tada, C. Heisenberg, Journal of Cell Biology 175 (2006) 791–802.
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2006 | Journal Article | IST-REx-ID: 4145
Single-cell detection of microRNAs in developing vertebrate embryos after acute administration of a dual-fluorescence reporter/sensor plasmid
D. Tonelli, F. Calegari, J. Fei, T. Nomura, N. Osumi, C. Heisenberg, W. Huttner, Biotechniques 41 (2006) 727–732.
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2006 | Journal Article | IST-REx-ID: 4176
Identification of regulators of germ layer morphogenesis using proteomics in zebrafish
V. Link, L. Carvalho, I. Castanon, P. Stockinger, A. Shevchenko, C. Heisenberg, Journal of Cell Science 119 (2006) 2073–2083.
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2006 | Conference Paper | IST-REx-ID: 4431
The embedded systems design challenge
T.A. Henzinger, J. Sifakis, in:, Springer, 2006, pp. 1–15.
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2006 | Conference Paper | IST-REx-ID: 4436
An interface algebra for real-time components
T.A. Henzinger, S. Matic, in:, IEEE, 2006, pp. 253–266.
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2006 | Conference Paper | IST-REx-ID: 4359
Field Constraint Analysis
T. Wies, V. Kuncak, P. Lam, A. Podelski, M. Rinard, in:, Springer, 2006, pp. 157–173.
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2006 | Conference Paper | IST-REx-ID: 4373
Real Time Temporal Logic: Past, Present, Future
O. Maler, D. Nickovic, A. Pnueli, in:, Springer, 2006, pp. 2–16.
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2006 | Conference Paper | IST-REx-ID: 4549
Compositional quantitative reasoning
K. Chatterjee, L. De Alfaro, M. Faella, T.A. Henzinger, R. Majumdar, M. Stoelinga, in:, IEEE, 2006, pp. 179–188.
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2006 | Conference Paper | IST-REx-ID: 4551
Markov decision processes with multiple objectives
K. Chatterjee, R. Majumdar, T.A. Henzinger, in:, Springer, 2006, pp. 325–336.
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2006 | Conference Paper | IST-REx-ID: 577
High-efficiency single-photon detectors
R. Rangarajan, J. Altepeter, E. Jeffrey, M. Stoutimore, N. Peters, O. Hosten, P. Kwiat, in:, SPIE, 2006.
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2006 | Journal Article | IST-REx-ID: 868
Evolution of glyoxylate cycle enzymes in Metazoa Evidence of multiple horizontal transfer events and pseudogene formation
F. Kondrashov, E. Koonin, I. Morgunov, T. Finogenova, M. Kondrashova, Biology Direct 1 (2006).
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2006 | Journal Article | IST-REx-ID: 7327
Experimental investigation of coupling phenomena in polymer electrolyte fuel cell stacks
M. Santis, S.A. Freunberger, M. Papra, A. Wokaun, F.N. Büchi, Journal of Power Sources 161 (2006) 1076–1083.
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