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147 Publications


2005 | Conference Paper | IST-REx-ID: 3183
Kolmogorov V, Criminisi A, Blake A, Cross G, Rother C. 2005. Bi-layer segmentation of binocular stereo video. CVPR: Computer Vision and Pattern Recognition vol. 2, 407–414.
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2005 | Conference Paper | IST-REx-ID: 3182
Kolmogorov V, Boykov Y. 2005. What metrics can be approximated by geo cuts or global optimization of length area and flux. ICCV: International Conference on Computer Vision vol. 1, 564–571.
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2005 | Conference Paper | IST-REx-ID: 3181
Kolmogorov V, Wainwright M. 2005. On the optimality of tree reweighted max product message passing. UAI: Uncertainty in Artificial Intelligence, 316–323.
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2005 | Journal Article | IST-REx-ID: 3417
Kuhn M, Janovjak HL, Hubain M, Mueller D. 2005. Automated alignment and pattern recognition of single-molecule force spectroscopy data. Journal of Microscopy. 218(2), 125–132.
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2005 | Journal Article | IST-REx-ID: 3416 | OA
Janovjak HL, Sapra T, Mueller D. 2005. Complex stability of single proteins explored by forced unfolding experiments. Biophysical Journal. 88(5), 37–39.
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2005 | Journal Article | IST-REx-ID: 3418
Janovjak HL, Struckmeier J, Mueller D. 2005. Hydrodynamic effects in fast AFM single molecule force measurements. European Biophysics Journal. 34(1), 91–96.
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2005 | Book Chapter | IST-REx-ID: 3433
Bollback JP. 2005.Posterior mapping and posterior predictive distributions. In: Statistical methods in Molecular Evolution. , 439–462.
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2005 | Patent | IST-REx-ID: 3509 | OA
Williams S, Edelsbrunner H, Fu P. 2005. Methods, apparatus and computer program products for modeling three-dimensional colored objects.
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2005 | Conference Paper | IST-REx-ID: 3558
Attali D, Cohen Steiner D, Edelsbrunner H. 2005. Extraction and simplification of iso-surfaces in tandem. SGP: Eurographics Symposium on Geometry processing, 139–148.
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2005 | Book Chapter | IST-REx-ID: 3576
Edelsbrunner H, Koehl P. 2005.The geometry of biomolecular solvation. In: Combinatorial and Computational Geometry. Mathematical Sciences Research Institute Publications, vol. 52, 243–275.
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2005 | Journal Article | IST-REx-ID: 3612
Davison A, Chiba S, Barton NH, Clarke B. 2005. Speciation and gene flow between snails of opposing chirality. PLoS Biology. 3(9).
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2005 | Journal Article | IST-REx-ID: 3611
Nürnberger B, Barton NH, Kruuk L, Vines T. 2005. Mating patterns in a Bombina hybrid zone: Inferences from adult and full sib genotypes. Heredity. 94(2), 247–257.
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2005 | Journal Article | IST-REx-ID: 3613
Gardner M, Fowler K, Barton NH, Patridge L. 2005. Genetic variation for total fitness in Drosophila melanogaster: Complex yet replicable patterns. Genetics. 169(3), 1553–1571.
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2005 | Journal Article | IST-REx-ID: 3691
Lampert C. 2005. Boundary regularity of admissible operators. Publicacions Matemàtiques. 49(1), 179–195.
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2005 | Journal Article | IST-REx-ID: 3721 | OA
Janovjak HL, Mueller D, Humphris A. 2005. Molecular force modulation spectroscopy revealing the dynamic response of single bacteriorhodopsins. Biophysical Journal. 88(2), 1423–1431.
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2005 | Journal Article | IST-REx-ID: 3741 | OA
Slonim N, Atwal G, Tkačik G, Bialek W. 2005. Information-based clustering. PNAS. 102(51), 18297–18302.
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2005 | Preprint | IST-REx-ID: 3746 | OA
Slonim N, Atwal G, Tkačik G, Bialek W. 2005. Estimating mutual information and multi-information in large networks. ArXiv, 1–11, .
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2005 | Journal Article | IST-REx-ID: 3808
Engel D, Jonas PM. 2005. Presynaptic action potential amplification by voltage-gated Na+ channels in hippocampal mossy fiber boutons. Neuron. 45(3), 405–17.
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2005 | Conference Paper | IST-REx-ID: 3892
Chatterjee K, Henzinger TA, Jurdziński M. 2005. Games with secure equilibria. FMCO: Formal Methods for Components and Objects, LNCS, vol. 3657, 141–161.
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2005 | Conference Paper | IST-REx-ID: 3902
Cremer S, Boomsma J. 2005. The drawback of mobility: invasive species in a globalised world. Marie Curie Conference.
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2005 | Journal Article | IST-REx-ID: 3933
Sixt MK, Kanazawa N, Selg M, Samson T, Roos G, Reinhardt D, Pabst R, Lutz M, Sorokin L. 2005. The conduit system transports soluble antigens from the afferent lymph to resident dendritic cells in the T cell area of the lymph node. Immunity. 22(1), 19–29.
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2005 | Journal Article | IST-REx-ID: 3983
Sohn J, Parks J, Buhrman G, Brown P, Kristjánsdóttir K, Safi A, Edelsbrunner H, Yang W, Rudolph J. 2005. Experimental validation of the docking orientation of Cdc25 with its Cdk2-CycA protein substrate. Biochemistry. 44(50), 16563–16573.
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2005 | Conference Paper | IST-REx-ID: 3982
Wang Y, Agarwal P, Brown P, Edelsbrunner H, Rudolph J. 2005. Coarse and reliable geometric alignment for protein docking. PSB: Pacific Symposium on Biocomputing, 64–75.
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2005 | Journal Article | IST-REx-ID: 4144
Ulrich F, Krieg M, Schötz E, Link V, Castanon I, Schnabel V, Taubenberger A, Müller D, Puech P, Heisenberg C-PJ. 2005. Wnt11 functions in gastrulation by controlling cell cohesion through Rab5c and E-cadherin. Developmental Cell. 9(4), 555–564.
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2005 | Journal Article | IST-REx-ID: 4138
Barton NH, Polechova J. 2005. The limitations of adaptive dynamics as a model of evolution. Journal of Evolutionary Biology. 18(5), 1186–1190.
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2005 | Journal Article | IST-REx-ID: 4155
Puech P, Taubenberger A, Ulrich F, Krieg M, Mueller D, Heisenberg C-PJ. 2005. Measuring cell adhesion forces of primary gastrulating cells from zebrafish using atomic force microscopy. Journal of Cell Science. 118(18), 4199–4206.
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2005 | Journal Article | IST-REx-ID: 4171
Montero J, Carvalho L, Wilsch Bräuninger M, Kilian B, Mustafa C, Heisenberg C-PJ. 2005. Shield formation at the onset of zebrafish gastrulation. Development. 132(6), 1187–1198.
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2005 | Journal Article | IST-REx-ID: 4249
Polechova J, Barton NH. 2005. Speciation through competition: A critical review. Evolution; International Journal of Organic Evolution. 59(6), 1194–1210.
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2005 | Journal Article | IST-REx-ID: 4251
Barton NH, Otto S. 2005. Evolution of recombination due to random drift. Genetics. 169(4), 2353–2370.
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2005 | Journal Article | IST-REx-ID: 4252 | OA
Johnson T, Barton NH. 2005. Theoretical models of selection and mutationon quantitative traits. Philosophical Transactions of the Royal Society of London. Series B, Biological Sciences. 360(1459), 1411–1425.
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2005 | Conference Paper | IST-REx-ID: 4404
Alur R, Cerny P, Madhusudan P, Nam W. 2005. Synthesis of interface specifications for Java classes. POPL: Principles of Programming Languages, 98–109.
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2005 | Conference Paper | IST-REx-ID: 4412
Matic S, Henzinger TA. 2005. Trading end-to-end latency for composability. RTSS: Real-Time Systems Symposium, 99–110.
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2005 | Conference Paper | IST-REx-ID: 4418
Kirsch C, Sanvido M, Henzinger TA. 2005. A programmable microkernel for real-time systems. VEE: Virtual Execution Environments, 35–45.
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2005 | Journal Article | IST-REx-ID: 4454
Henzinger TA, Majumdar R, Raskin J. 2005. A classification of symbolic transition systems. ACM Transactions on Computational Logic (TOCL). 6(1), 1–32.
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2005 | Conference Paper | IST-REx-ID: 4455
Henzinger TA, Majumdar R, Prabhu V. 2005. Quantifying similarities between timed systems. FORMATS: Formal Modeling and Analysis of Timed Systems, LNCS, vol. 3829, 226–241.
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2005 | Conference Paper | IST-REx-ID: 4456
Henzinger TA, Jhala R, Majumdar R. 2005. Permissive interfaces. FSE: Foundations of Software Engineering, 31–40.
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2005 | Conference Paper | IST-REx-ID: 4457
Henzinger TA, Kirsch C, Matic S. 2005. Composable code generation for distributed Giotto. LCTES: Languages, Compilers, and Tools for Embedded Systems, 21–30.
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2005 | Conference Paper | IST-REx-ID: 4536
Doyen L, Henzinger TA, Raskin J. 2005. Automatic rectangular refinement of affine hybrid systems. FORMATS: Formal Modeling and Analysis of Timed Systems, LNCS, vol. 3829, 144–161.
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2005 | Conference Paper | IST-REx-ID: 4541
Chatterjee K, Henzinger TA. 2005. Semiperfect-information games. FSTTCS: Foundations of Software Technology and Theoretical Computer Science, LNCS, vol. 3821, 1–18.
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2005 | Conference Paper | IST-REx-ID: 4553
Chatterjee K, De Alfaro L, Henzinger TA. 2005. The complexity of stochastic Rabin and Streett games. ICALP: Automata, Languages and Programming, LNCS, vol. 3580, 878–890.
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2005 | Conference Paper | IST-REx-ID: 4554
Chatterjee K, Henzinger TA, Jurdziński M. 2005. Mean-payoff parity games. LICS: Logic in Computer Science, 178–187.
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2005 | Conference Paper | IST-REx-ID: 4560
Chakrabarti A, Chatterjee K, Henzinger TA, Kupferman O, Majumdar R. 2005. Verifying quantitative properties using bound functions. CHARME: Correct Hardware Design and Verification Methods, LNCS, vol. 3725, 50–64.
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2005 | Conference Paper | IST-REx-ID: 4557
Chatterjee K, Henzinger TA, Jhala R, Majumdar R. 2005. Counterexample-guided planning. UAI: Uncertainty in Artificial Intelligence, 104–111.
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2005 | Conference Paper | IST-REx-ID: 4579
Beyer D, Henzinger TA, Jhala R, Majumdar R. 2005. Checking memory safety with BLAST. FASE: Fundamental Approaches To Software Engineering, LNCS, vol. 3442, 2–18.
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2005 | Conference Paper | IST-REx-ID: 4576
Beyer D, Chakrabarti A, Henzinger TA. 2005. Web service interfaces. WWW: World Wide Web Conference, 148–159.
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2005 | Journal Article | IST-REx-ID: 4625
De Alfaro L, Faella M, Henzinger TA, Majumdar R, Stoelinga M. 2005. Model checking discounted temporal properties. Theoretical Computer Science. 345(1), 139–170.
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2005 | Conference Paper | IST-REx-ID: 4624
De Alfaro L, Henzinger TA. 2005. Interface-based design. Engineering Theories of Software Intensive Systems, NATO Science Series: Mathematics, Physics, and Chemistry, vol. 195, 83–104.
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2005 | Conference Paper | IST-REx-ID: 575
Hosten O, Rakher M, Barreiro J, Peters N, Kwiat P. 2005. Counterfactual quantum computation. QELS: Quantum Electronics and Laser Science, QELS, vol. 1, 365–367.
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2005 | Journal Article | IST-REx-ID: 6153
de Bono M, Villu Maricq A. 2005. Neuronal substrates of complex behaviors in C. elegans. Annual Review of Neuroscience. 28, 451–501.
View | DOI | PubMed | Europe PMC
 

2005 | Journal Article | IST-REx-ID: 6154
Cheung BHH, Cohen M, Rogers C, Albayram O, de Bono M. 2005. Experience-dependent modulation of C. elegans behavior by ambient oxygen. Current Biology. 15(10), 905–917.
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