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98 Publications


2004 | Journal Article | IST-REx-ID: 864
A. Panchenko, F. Kondrashov, and S. Bryant, “Prediction of functional sites by analysis of sequence and structure conservation,” Protein Science, vol. 13, no. 4, pp. 884–892, 2004.
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2004 | Journal Article | IST-REx-ID: 870
F. Kondrashov, A. Ogurtsov, and A. Kondrashov, “Bioinformatical assay of human gene morbidity,” Nucleic Acids Research, vol. 32, no. 5, pp. 1731–1737, 2004.
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2004 | Journal Article | IST-REx-ID: 875
F. Kondrashov and E. Koonin, “A common framework for understanding the origin of genetic dominance and evolutionary fates of gene duplications,” Trends in Genetics, vol. 20, no. 7, pp. 287–291, 2004.
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2004 | Journal Article | IST-REx-ID: 889
A. Kern and F. Kondrashov, “Mechanisms and convergence of compensatory evolution in mammalian mitochondrial tRNAs,” Nature Genetics, vol. 36, no. 11, pp. 1207–1212, 2004.
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2004 | Journal Article | IST-REx-ID: 898
G. Bazykin, F. Kondrashov, A. Ogurtsov, S. Sunyaev, and A. Kondrashov, “Positive selection at sites of multiple amino acid replacements since rat-mouse divergence,” Nature, vol. 429, no. 6991, pp. 558–562, 2004.
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2004 | Journal Article | IST-REx-ID: 902
C. Castillo Davis, F. Kondrashov, D. Hartl, and R. Kulathinal, “The functional genomic distribution of protein divergence in two animal phyla: Coevolution, genomic conflict, and constraint,” Genome Research, vol. 14, no. 5, pp. 802–811, 2004.
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2004 | Journal Article | IST-REx-ID: 1456 | OA
T. Hausel, E. Hunsicker, and R. Mazzeo, “Hodge cohomology of gravitational instantons,” Duke Mathematical Journal, vol. 122, no. 3, pp. 485–548, 2004.
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2004 | Journal Article | IST-REx-ID: 1464 | OA
T. Hausel and M. Thaddeus, “Generators for the cohomology ring of the moduli space of rank 2 higgs bundles,” Proceedings of the London Mathematical Society, vol. 88, no. 3, pp. 632–658, 2004.
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2004 | Journal Article | IST-REx-ID: 3172
V. Kolmogorov et al., “Multiprocessor scheduling implementation of the simultaneous multiple volume SMV navigator method,” Magnetic Resonance in Medicine, vol. 52, no. 2, pp. 362–367, 2004.
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2004 | Journal Article | IST-REx-ID: 3173
V. Kolmogorov and R. Zabih, “What energy functions can be minimized via graph cuts? ,” IEEE Transactions on Pattern Analysis and Machine Intelligence, vol. 26, no. 2, pp. 147–159, 2004.
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2004 | Conference Paper | IST-REx-ID: 3177
R. Zabih and V. Kolmogorov, “Spatially coherent clustering using graph cuts,” presented at the CVPR: Computer Vision and Pattern Recognition, 2004, vol. 2, pp. 437–444.
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2004 | Journal Article | IST-REx-ID: 3178
Y. Boykov and V. Kolmogorov, “An experimental comparison of min-cut/max-flow algorithms for energy minimization in vision,” IEEE Transactions on Pattern Analysis and Machine Intelligence, vol. 26, no. 9, pp. 1124–1137, 2004.
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2004 | Conference Paper | IST-REx-ID: 3179
C. Rother, V. Kolmogorov, and A. Blake, “"GrabCut" - Interactive foreground extraction using iterated graph cuts ,” presented at the SIGGRAPH: Special Interest Group on Computer Graphics and Interactive Techniques, 2004, vol. 23, no. 3, pp. 309–314.
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2004 | Conference Paper | IST-REx-ID: 3208
U. Maurer and K. Z. Pietrzak, “Composition of random systems: When two weak make one strong,” presented at the TCC: Theory of Cryptography Conference, 2004, vol. 2951, pp. 410–427.
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2004 | Journal Article | IST-REx-ID: 3419
H. L. Janovjak, J. Struckmeier, M. Hubain, M. Kessler, A. Kedrov, and D. Mueller, “Probing the energy landscape of the membrane protein bacteriorhodopsin,” Structure, vol. 12, no. 5, pp. 871–879, 2004.
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2004 | Journal Article | IST-REx-ID: 3420
A. Kedrov, C. Ziegler, H. L. Janovjak, W. Kühlbrandt, and D. Mueller, “Controlled unfolding and refolding of a single sodium/proton antiporter using atomic force microscopy,” Journal of Molecular Biology, vol. 340, no. 5, pp. 1143–1152, 2004.
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2004 | Book Chapter | IST-REx-ID: 3574
H. Edelsbrunner, “Biological applications of computational topology,” in Handbook of Discrete and Computational Geometry, CRC Press, 2004, pp. 1395–1412.
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2004 | Book Chapter | IST-REx-ID: 3575
H. Edelsbrunner and J. Harer, “Jacobi sets of multiple Morse functions,” in Foundations of Computational Mathematics, vol. 312, Springer, 2004, pp. 37–57.
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2004 | Book Review | IST-REx-ID: 3595
B. Charlesworth and N. H. Barton, “Genome size: Does bigger mean worse?,” Current Biology, vol. 14, no. 6. Cell Press, pp. R233–R235, 2004.
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2004 | Journal Article | IST-REx-ID: 3614
N. H. Barton and M. Turelli, “Effects of allele frequency changes on variance components under a general model of epistasis,” Evolution; International Journal of Organic Evolution, vol. 58, no. 10, pp. 2111–2132, 2004.
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