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98 Publications


2004 | Journal Article | IST-REx-ID: 864
Panchenko, Anna, Fyodor Kondrashov, and Stephen Bryant. “Prediction of Functional Sites by Analysis of Sequence and Structure Conservation.” Protein Science 13, no. 4 (2004): 884–92. https://doi.org/10.1110/ps.03465504.
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2004 | Journal Article | IST-REx-ID: 870
Kondrashov, Fyodor, Aleksey Ogurtsov, and Alexey Kondrashov. “Bioinformatical Assay of Human Gene Morbidity.” Nucleic Acids Research 32, no. 5 (2004): 1731–37. https://doi.org/10.1093/nar/gkh330.
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2004 | Journal Article | IST-REx-ID: 875
Kondrashov, Fyodor, and Eugene Koonin. “A Common Framework for Understanding the Origin of Genetic Dominance and Evolutionary Fates of Gene Duplications.” Trends in Genetics 20, no. 7 (2004): 287–91. https://doi.org/10.1016/j.tig.2004.05.001.
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2004 | Journal Article | IST-REx-ID: 889
Kern, Andrew, and Fyodor Kondrashov. “Mechanisms and Convergence of Compensatory Evolution in Mammalian Mitochondrial TRNAs.” Nature Genetics 36, no. 11 (2004): 1207–12. https://doi.org/10.1038/ng1451.
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2004 | Journal Article | IST-REx-ID: 898
Bazykin, Georgii, Fyodor Kondrashov, Aleksey Ogurtsov, Shamil Sunyaev, and Alexey Kondrashov. “Positive Selection at Sites of Multiple Amino Acid Replacements since Rat-Mouse Divergence.” Nature 429, no. 6991 (2004): 558–62. https://doi.org/10.1038/nature02601.
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2004 | Journal Article | IST-REx-ID: 902
Castillo Davis, Cristian, Fyodor Kondrashov, Daniel Hartl, and Rob Kulathinal. “The Functional Genomic Distribution of Protein Divergence in Two Animal Phyla: Coevolution, Genomic Conflict, and Constraint.” Genome Research 14, no. 5 (2004): 802–11. https://doi.org/10.1101/gr.2195604.
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2004 | Journal Article | IST-REx-ID: 1456 | OA
Hausel, Tamas, Eugénie Hunsicker, and Rafe Mazzeo. “Hodge Cohomology of Gravitational Instantons.” Duke Mathematical Journal 122, no. 3 (2004): 485–548. https://doi.org/10.1215/S0012-7094-04-12233-X.
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2004 | Journal Article | IST-REx-ID: 1464 | OA
Hausel, Tamas, and Michael Thaddeus. “Generators for the Cohomology Ring of the Moduli Space of Rank 2 Higgs Bundles.” Proceedings of the London Mathematical Society 88, no. 3 (2004): 632–58. https://doi.org/10.1112/S0024611503014618.
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2004 | Journal Article | IST-REx-ID: 3172
Kolmogorov, Vladimir, Thành Nguyen, Anthony Nuval, Pascal Spincemaille, Martin Prince, Ramin Zabih, and Yusu Wang. “Multiprocessor Scheduling Implementation of the Simultaneous Multiple Volume SMV Navigator Method.” Magnetic Resonance in Medicine 52, no. 2 (2004): 362–67. https://doi.org/10.1002/mrm.20162.
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2004 | Journal Article | IST-REx-ID: 3173
Kolmogorov, Vladimir, and Ramin Zabih. “What Energy Functions Can Be Minimized via Graph Cuts? .” IEEE Transactions on Pattern Analysis and Machine Intelligence 26, no. 2 (2004): 147–59. https://doi.org/10.1109/TPAMI.2004.1262177.
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2004 | Conference Paper | IST-REx-ID: 3177
Zabih, Ramin, and Vladimir Kolmogorov. “Spatially Coherent Clustering Using Graph Cuts,” 2:437–44. IEEE, 2004. https://doi.org/10.1109/CVPR.2004.1315196.
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2004 | Journal Article | IST-REx-ID: 3178
Boykov, Yuri, and Vladimir Kolmogorov. “An Experimental Comparison of Min-Cut/Max-Flow Algorithms for Energy Minimization in Vision.” IEEE Transactions on Pattern Analysis and Machine Intelligence 26, no. 9 (2004): 1124–37. https://doi.org/10.1109/TPAMI.2004.60.
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2004 | Conference Paper | IST-REx-ID: 3179
Rother, Carsten, Vladimir Kolmogorov, and Andrew Blake. “"GrabCut" - Interactive Foreground Extraction Using Iterated Graph Cuts ,” 23:309–14. ACM, 2004. https://doi.org/10.1145/1015706.1015720.
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2004 | Conference Paper | IST-REx-ID: 3208
Maurer, Ueli, and Krzysztof Z Pietrzak. “Composition of Random Systems: When Two Weak Make One Strong,” 2951:410–27. Springer, 2004. https://doi.org/10.1007/978-3-540-24638-1_23.
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2004 | Journal Article | IST-REx-ID: 3419
Janovjak, Harald L, Jens Struckmeier, Maurice Hubain, Max Kessler, Alexej Kedrov, and Daniel Mueller. “Probing the Energy Landscape of the Membrane Protein Bacteriorhodopsin.” Structure 12, no. 5 (2004): 871–79. https://doi.org/10.1016/j.str.2004.03.016.
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2004 | Journal Article | IST-REx-ID: 3420
Kedrov, Alexej, Christine Ziegler, Harald L Janovjak, Werner Kühlbrandt, and Daniel Mueller. “Controlled Unfolding and Refolding of a Single Sodium/Proton Antiporter Using Atomic Force Microscopy.” Journal of Molecular Biology 340, no. 5 (2004): 1143–52. https://doi.org/10.1016/j.jmb.2004.05.026.
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2004 | Book Chapter | IST-REx-ID: 3574
Edelsbrunner, Herbert. “Biological Applications of Computational Topology.” In Handbook of Discrete and Computational Geometry, 1395–1412. CRC Press, 2004.
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2004 | Book Chapter | IST-REx-ID: 3575
Edelsbrunner, Herbert, and John Harer. “Jacobi Sets of Multiple Morse Functions.” In Foundations of Computational Mathematics, 312:37–57. Springer, 2004. https://doi.org/10.1017/CBO9781139106962.003.
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2004 | Book Review | IST-REx-ID: 3595
Charlesworth, Brian, and Nicholas H Barton. “Genome Size: Does Bigger Mean Worse?” Current Biology. Cell Press, 2004. https://doi.org/10.1016/j.cub.2004.02.054.
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2004 | Journal Article | IST-REx-ID: 3614
Barton, Nicholas H, and Michael Turelli. “Effects of Allele Frequency Changes on Variance Components under a General Model of Epistasis.” Evolution; International Journal of Organic Evolution 58, no. 10 (2004): 2111–32. https://doi.org/10.1111/j.0014-3820.2004.tb01591.x.
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