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111 Publications


2004 | Journal Article | IST-REx-ID: 3984
Bremer, Peer, et al. “A Topological Hierarchy for Functions on Triangulated Surfaces.” IEEE Transactions on Visualization and Computer Graphics, vol. 10, no. 4, IEEE, 2004, pp. 385–96, doi:10.1109/TVCG.2004.3.
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2004 | Journal Article | IST-REx-ID: 3987
Natarajan, Vijay, and Herbert Edelsbrunner. “Simplification of Three-Dimensional Density Maps.” IEEE Transactions on Visualization and Computer Graphics, vol. 10, no. 5, IEEE, 2004, pp. 587–97, doi:10.1109/TVCG.2004.32.
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2004 | Journal Article | IST-REx-ID: 3985
Cole Mclaughlin, Kree, et al. “Loops in Reeb Graphs of 2-Manifolds.” Discrete & Computational Geometry, vol. 32, no. 2, Springer, 2004, pp. 231–44, doi:10.1007/s00454-004-1122-6.
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2004 | Conference Paper | IST-REx-ID: 3989
Edelsbrunner, Herbert, et al. Local and Global Comparison of Continuous Functions. IEEE, 2004, pp. 275–80, doi:10.1109/VISUAL.2004.68.
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2004 | Journal Article | IST-REx-ID: 4172
Montero, Juan, and Carl-Philipp J. Heisenberg. “Gastrulation Dynamics: Cells Move into Focus.” Trends in Cell Biology, vol. 14, no. 11, Cell Press, 2004, pp. 620–27, doi:10.1016/j.tcb.2004.09.008.
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2004 | Journal Article | IST-REx-ID: 4238
de Vladar, Harold, and J. González. “Dynamic Response of Cancer under the Influence of Immunological Activity and Therapy.” Journal of Theoretical Biology, vol. 227, no. 3, Elsevier, 2004, pp. 335–48, doi:3801.
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2004 | Book Chapter | IST-REx-ID: 4230
de Vladar, Harold, et al. “A Mechanism for the Prebiotic Emergence of Proteins.” Life in the Universe From the Miller Experiment to the Search for Life on Other Worlds, edited by A. Hanslmeier et al., Springer, 2004, pp. 83–87.
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2004 | Thesis | IST-REx-ID: 4236
de Vladar, Harold. Métodos No Lineales y Sus Aplicaciones En Dinámicas Aleatorias de Poblaciones Celulares. Centro de estudios avazados, IVIC, 2004, doi:3810.
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2004 | Conference Paper | IST-REx-ID: 4372
Maler, Oded, and Dejan Nickovic. Monitoring Temporal Properties of Continuous Signals. Springer, 2004, pp. 152–66, doi:1572.
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2004 | Thesis | IST-REx-ID: 4424
Jhala, Ranjit. Program Verification by Lazy Abstraction. University of California, Berkeley, 2004, pp. 1–165.
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2004 | Conference Paper | IST-REx-ID: 4445
Henzinger, Thomas A., and Christoph Kirsch. A Typed Assembly Language for Real-Time Programs. ACM, 2004, pp. 104–13, doi:10.1145/1017753.1017774.
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2004 | Conference Paper | IST-REx-ID: 4458
Henzinger, Thomas A., et al. Abstractions from Proofs. ACM, 2004, pp. 232–44, doi:10.1145/964001.964021.
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2004 | Book Chapter | IST-REx-ID: 4461
Henzinger, Thomas A., et al. “Extreme Model Checking.” Verification: Theory and Practice, vol. 2772, Springer, 2004, pp. 332–58, doi:10.1007/978-3-540-39910-0_16.
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2004 | Conference Paper | IST-REx-ID: 4459
Henzinger, Thomas A., et al. Race Checking by Context Inference. ACM, 2004, pp. 1–13, doi:10.1145/996841.996844.
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2004 | Conference Paper | IST-REx-ID: 4525
Ghosal, Arkadeb, et al. Event-Driven Programming with Logical Execution Times. Vol. 2993, Springer, 2004, pp. 167–70, doi:10.1007/978-3-540-24743-2_24.
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2004 | Conference Paper | IST-REx-ID: 4555
Chatterjee, Krishnendu, et al. Trading Memory for Randomness. IEEE, 2004, pp. 206–17, doi:10.1109/QEST.2004.10051.
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2004 | Conference Paper | IST-REx-ID: 4558
Chatterjee, Krishnendu, et al. Quantitative Stochastic Parity Games. SIAM, 2004, pp. 121–30.
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2004 | Journal Article | IST-REx-ID: 4556
Chatterjee, Krishnendu, et al. “Stack Size Analysis for Interrupt-Driven Programs.” Information and Computation, vol. 194, no. 2, Elsevier, 2004, pp. 144–74, doi:10.1016/j.ic.2004.06.001.
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2004 | Conference Paper | IST-REx-ID: 4578
Beyer, Dirk, et al. The BLAST Query Language for Software Verification. Vol. 3148, Springer, 2004, pp. 2–18, doi:10.1007/978-3-540-27864-1_2.
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2004 | Conference Paper | IST-REx-ID: 4577
Beyer, Dirk, et al. An Eclipse Plug-in for Model Checking. IEEE, 2004, pp. 251–55, doi:10.1109/WPC.2004.1311069  .
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2004 | Conference Paper | IST-REx-ID: 4581
Beyer, Dirk, et al. Generating Tests from Counterexamples. IEEE, 2004, pp. 326–35, doi:10.1109/ICSE.2004.1317455.
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2004 | Conference Paper | IST-REx-ID: 4629
De Alfaro, Luca, et al. Model Checking Discounted Temporal Properties. Vol. 2988, Springer, 2004, pp. 77–92, doi:10.1007/978-3-540-24730-2_6.
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2004 | Journal Article | IST-REx-ID: 6155
Cheung, Benny H. .., et al. “Soluble Guanylate Cyclases Act in Neurons Exposed to the Body Fluid to Promote C. Elegans Aggregation Behavior.” Current Biology, vol. 14, no. 12, Elsevier, 2004, pp. 1105–11, doi:10.1016/j.cub.2004.06.027.
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2004 | Journal Article | IST-REx-ID: 7334
Mantzaras, John, et al. “Fuel Cell Modeling and Simulations.” CHIMIA International Journal for Chemistry, vol. 58, no. 12, Swiss Chemical Society, 2004, pp. 857–68, doi:10.2533/000942904777677029.
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2004 | Journal Article | IST-REx-ID: 7333
Santis, M., et al. “Modular Stack-Internal Air Humidification Concept-Verification in a 1 KW Stack.” Fuel Cells, vol. 4, no. 3, Wiley, 2004, pp. 214–18, doi:10.1002/fuce.200400028.
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2004 | Journal Article | IST-REx-ID: 864
Panchenko, Anna, et al. “Prediction of Functional Sites by Analysis of Sequence and Structure Conservation.” Protein Science, vol. 13, no. 4, Wiley-Blackwell, 2004, pp. 884–92, doi:10.1110/ps.03465504.
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2004 | Journal Article | IST-REx-ID: 870
Kondrashov, Fyodor, et al. “Bioinformatical Assay of Human Gene Morbidity.” Nucleic Acids Research, vol. 32, no. 5, Oxford University Press, 2004, pp. 1731–37, doi:10.1093/nar/gkh330.
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2004 | Journal Article | IST-REx-ID: 875
Kondrashov, Fyodor, and Eugene Koonin. “A Common Framework for Understanding the Origin of Genetic Dominance and Evolutionary Fates of Gene Duplications.” Trends in Genetics, vol. 20, no. 7, Elsevier, 2004, pp. 287–91, doi:10.1016/j.tig.2004.05.001.
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2004 | Journal Article | IST-REx-ID: 889
Kern, Andrew, and Fyodor Kondrashov. “Mechanisms and Convergence of Compensatory Evolution in Mammalian Mitochondrial TRNAs.” Nature Genetics, vol. 36, no. 11, Nature Publishing Group, 2004, pp. 1207–12, doi:10.1038/ng1451.
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2004 | Journal Article | IST-REx-ID: 9493 | OA
Zilberman, Daniel, et al. “Role of Arabidopsis ARGONAUTE4 in RNA-Directed DNA Methylation Triggered by Inverted Repeats.” Current Biology, vol. 14, no. 13, Elsevier, 2004, pp. 1214–20, doi:10.1016/j.cub.2004.06.055.
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2004 | Journal Article | IST-REx-ID: 9517 | OA
Xie, Zhixin, et al. “Genetic and Functional Diversification of Small RNA Pathways in Plants.” PLoS Biology, vol. 2, no. 5, Public Library of Science, 2004, pp. 0642–52, doi:10.1371/journal.pbio.0020104.
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2004 | Journal Article | IST-REx-ID: 9511 | OA
Zilberman, Daniel, and Steven Henikoff. “Silencing of Transposons in Plant Genomes: Kick Them When They’re Down.” Genome Biology, vol. 5, no. 12, 249, Springer Nature, 2004, doi:10.1186/gb-2004-5-12-249.
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2004 | Journal Article | IST-REx-ID: 8517
Dolgopyat, Dmitry, et al. “A Limit Shape Theorem for Periodic Stochastic Dispersion.” Communications on Pure and Applied Mathematics, vol. 57, no. 9, Wiley, 2004, pp. 1127–58, doi:10.1002/cpa.20032.
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2004 | Journal Article | IST-REx-ID: 8518
Koralov, Leonid, et al. “Sample Path Properties of the Stochastic Flows.” The Annals of Probability, vol. 32, no. 1A, Institute of Mathematical Statistics, 2004, pp. 1–27, doi:10.1214/aop/1078415827.
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2004 | Journal Article | IST-REx-ID: 898
Bazykin, Georgii, et al. “Positive Selection at Sites of Multiple Amino Acid Replacements since Rat-Mouse Divergence.” Nature, vol. 429, no. 6991, Nature Publishing Group, 2004, pp. 558–62, doi:10.1038/nature02601.
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2004 | Journal Article | IST-REx-ID: 902
Castillo Davis, Cristian, et al. “The Functional Genomic Distribution of Protein Divergence in Two Animal Phyla: Coevolution, Genomic Conflict, and Constraint.” Genome Research, vol. 14, no. 5, Cold Spring Harbor Laboratory Press, 2004, pp. 802–11, doi:10.1101/gr.2195604.
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2004 | Journal Article | IST-REx-ID: 9454
Chan, Simon W. L., et al. “RNA Silencing Genes Control de Novo DNA Methylation.” Science, vol. 303, no. 5662, American Association for the Advancement of Science, 2004, p. 1336, doi:10.1126/science.1095989.
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2004 | Journal Article | IST-REx-ID: 12203
Liao, Zhihua, et al. “A New Geranylgeranyl Diphosphate Synthase Gene from Ginkgo Biloba, Which Intermediates the Biosynthesis of the Key Precursor for Ginkgolides.” DNA Sequence, vol. 15, no. 2, Informa UK Limited, 2004, pp. 153–58, doi:10.1080/10425170410001667348.
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2004 | Journal Article | IST-REx-ID: 13435
Klajn, Rafal, et al. “Multicolour Micropatterning of Thin Films of Dry Gels.” Nature Materials, vol. 3, Springer Nature, 2004, pp. 729–35, doi:10.1038/nmat1231.
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2004 | Journal Article | IST-REx-ID: 13434
Campbell, C. J., et al. “Color Micro- and Nanopatterning with Counter-Propagating Reaction-Diffusion Fronts.” Advanced Materials, vol. 16, no. 21, Wiley, 2004, pp. 1912–17, doi:10.1002/adma.200400383.
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2004 | Journal Article | IST-REx-ID: 7706
Brunet, Anne, et al. “Stress-Dependent Regulation of FOXO Transcription Factors by the SIRT1 Deacetylase.” Science, vol. 303, no. 5666, American Association for the Advancement of Science, 2004, pp. 2011–15, doi:10.1126/science.1094637.
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