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111 Publications
2004 | Journal Article | IST-REx-ID: 4253
Barton, Nicholas H., et al. “Coalescence in a Random Background.” Annals of Applied Probability, vol. 14, no. 2, Institute of Mathematical Statistics, 2004, pp. 754–85.
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2004 | Book Review | IST-REx-ID: 3142
Hippenmeyer, Simon, et al. “Control of Neuronal Phenotype: What Targets Tell the Cell Bodies.” Trends in Neurosciences, vol. 27, no. 8, Elsevier, 2004, pp. 482–88, doi:10.1016/j.tins.2004.05.012.
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2004 | Journal Article | IST-REx-ID: 3178
Boykov, Yuri, and Vladimir Kolmogorov. “An Experimental Comparison of Min-Cut/Max-Flow Algorithms for Energy Minimization in Vision.” IEEE Transactions on Pattern Analysis and Machine Intelligence, vol. 26, no. 9, IEEE, 2004, pp. 1124–37, doi:10.1109/TPAMI.2004.60.
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2004 | Journal Article | IST-REx-ID: 3173
Kolmogorov, Vladimir, and Ramin Zabih. “What Energy Functions Can Be Minimized via Graph Cuts? .” IEEE Transactions on Pattern Analysis and Machine Intelligence, vol. 26, no. 2, IEEE, 2004, pp. 147–59, doi:10.1109/TPAMI.2004.1262177.
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2004 | Journal Article | IST-REx-ID: 3172
Kolmogorov, Vladimir, et al. “Multiprocessor Scheduling Implementation of the Simultaneous Multiple Volume SMV Navigator Method.” Magnetic Resonance in Medicine, vol. 52, no. 2, Wiley-Blackwell, 2004, pp. 362–67, doi:10.1002/mrm.20162.
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2004 | Conference Paper | IST-REx-ID: 3177
Zabih, Ramin, and Vladimir Kolmogorov. Spatially Coherent Clustering Using Graph Cuts. Vol. 2, IEEE, 2004, pp. 437–44, doi:10.1109/CVPR.2004.1315196.
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2004 | Conference Paper | IST-REx-ID: 3179
Rother, Carsten, et al. "GrabCut" - Interactive Foreground Extraction Using Iterated Graph Cuts . Vol. 23, no. 3, ACM, 2004, pp. 309–14, doi:10.1145/1015706.1015720.
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2004 | Journal Article | IST-REx-ID: 3420
Kedrov, Alexej, et al. “Controlled Unfolding and Refolding of a Single Sodium/Proton Antiporter Using Atomic Force Microscopy.” Journal of Molecular Biology, vol. 340, no. 5, Elsevier, 2004, pp. 1143–52, doi:10.1016/j.jmb.2004.05.026.
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2004 | Journal Article | IST-REx-ID: 3419
Janovjak, Harald L., et al. “Probing the Energy Landscape of the Membrane Protein Bacteriorhodopsin.” Structure, vol. 12, no. 5, Cell Press, 2004, pp. 871–79, doi:10.1016/j.str.2004.03.016.
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2004 | Book Chapter | IST-REx-ID: 3575
Edelsbrunner, Herbert, and John Harer. “Jacobi Sets of Multiple Morse Functions.” Foundations of Computational Mathematics, vol. 312, Springer, 2004, pp. 37–57, doi:10.1017/CBO9781139106962.003.
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2004 | Book Chapter | IST-REx-ID: 3574
Edelsbrunner, Herbert. “Biological Applications of Computational Topology.” Handbook of Discrete and Computational Geometry, CRC Press, 2004, pp. 1395–412.
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2004 | Book Review | IST-REx-ID: 3595
Charlesworth, Brian, and Nicholas H. Barton. “Genome Size: Does Bigger Mean Worse?” Current Biology, vol. 14, no. 6, Cell Press, 2004, pp. R233–35, doi:10.1016/j.cub.2004.02.054.
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2004 | Journal Article | IST-REx-ID: 3614
Barton, Nicholas H., and Michael Turelli. “Effects of Allele Frequency Changes on Variance Components under a General Model of Epistasis.” Evolution; International Journal of Organic Evolution, vol. 58, no. 10, Wiley-Blackwell, 2004, pp. 2111–32, doi:10.1111/j.0014-3820.2004.tb01591.x.
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2004 | Journal Article | IST-REx-ID: 3615
Turelli, Michael, and Nicholas H. Barton. “Polygenic Variation Maintained by Balancing Selection: Pleiotropy, Sex-Dependent Allelic Effects and GxE Interactions.” Genetics, vol. 166, no. 2, Genetics Society of America, 2004, pp. 1053–79, doi:10.1534/genetics.166.2.1053.
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2004 | Journal Article | IST-REx-ID: 3807 | 
Kampa, Bjorn, et al. “Kinetics of Mg(2+) Unblock of NMDA Receptors: Implications for Spike-Timing Dependent Synaptic Plasticity.” Journal of Physiology, vol. 556, no. Pt 2, Wiley-Blackwell, 2004, pp. 337–45, doi:10.1113/jphysiol.2003.058842 .
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2004 | Journal Article | IST-REx-ID: 3809
Schmidt Hieber, Christoph, et al. “Enhanced Synaptic Plasticity in Newly Generated Granule Cells of the Adult Hippocampus.” Nature, vol. 429, no. 6988, Nature Publishing Group, 2004, pp. 184–87, doi:10.1038/nature02553.
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2004 | Journal Article | IST-REx-ID: 3805
Jonas, Peter M., et al. “Interneuron Diversity Series: Fast in, Fast out--Temporal and Spatial Signal Processing in Hippocampal Interneurons.” Trends in Neurosciences, vol. 27, no. 1, Elsevier, 2004, pp. 30–40, doi:doi:10.1016/j.tins.2003.10.010.
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2004 | Journal Article | IST-REx-ID: 3918
Heinze, Jürgen, et al. “Production of Winged and Wingless Males in the Ant, Cardiocondyla Minutior.” Insectes Sociaux, vol. 51, no. 3, Springer, 2004, pp. 275–78, doi:10.1007/s00040-004-0740-6.
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2004 | Conference Paper | IST-REx-ID: 3988
Choi, Vicky, et al. Local Search Heuristic for Rigid Protein Docking. Vol. 3240, Springer, 2004, pp. 218–29, doi:10.1007/978-3-540-30219-3_19.
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2004 | Journal Article | IST-REx-ID: 3986
Bryant, Robert, et al. “The Area Derivative of a Space-Filling Diagram.” Discrete & Computational Geometry, vol. 32, no. 3, Springer, 2004, pp. 293–308, doi:10.1007/s00454-004-1099-1.
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2004 | Journal Article | IST-REx-ID: 3984
Bremer, Peer, et al. “A Topological Hierarchy for Functions on Triangulated Surfaces.” IEEE Transactions on Visualization and Computer Graphics, vol. 10, no. 4, IEEE, 2004, pp. 385–96, doi:10.1109/TVCG.2004.3.
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2004 | Journal Article | IST-REx-ID: 3987
Natarajan, Vijay, and Herbert Edelsbrunner. “Simplification of Three-Dimensional Density Maps.” IEEE Transactions on Visualization and Computer Graphics, vol. 10, no. 5, IEEE, 2004, pp. 587–97, doi:10.1109/TVCG.2004.32.
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2004 | Journal Article | IST-REx-ID: 3985
Cole Mclaughlin, Kree, et al. “Loops in Reeb Graphs of 2-Manifolds.” Discrete & Computational Geometry, vol. 32, no. 2, Springer, 2004, pp. 231–44, doi:10.1007/s00454-004-1122-6.
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2004 | Conference Paper | IST-REx-ID: 3989
Edelsbrunner, Herbert, et al. Local and Global Comparison of Continuous Functions. IEEE, 2004, pp. 275–80, doi:10.1109/VISUAL.2004.68.
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2004 | Journal Article | IST-REx-ID: 4172
Montero, Juan, and Carl-Philipp J. Heisenberg. “Gastrulation Dynamics: Cells Move into Focus.” Trends in Cell Biology, vol. 14, no. 11, Cell Press, 2004, pp. 620–27, doi:10.1016/j.tcb.2004.09.008.
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2004 | Book Chapter | IST-REx-ID: 4230
de Vladar, Harold, et al. “A Mechanism for the Prebiotic Emergence of Proteins.” Life in the Universe From the Miller Experiment to the Search for Life on Other Worlds, edited by A. Hanslmeier et al., Springer, 2004, pp. 83–87.
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2004 | Thesis | IST-REx-ID: 4424
Jhala, Ranjit. Program Verification by Lazy Abstraction. University of California, Berkeley, 2004, pp. 1–165.
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2004 | Conference Paper | IST-REx-ID: 4445
Henzinger, Thomas A., and Christoph Kirsch. A Typed Assembly Language for Real-Time Programs. ACM, 2004, pp. 104–13, doi:10.1145/1017753.1017774.
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2004 | Conference Paper | IST-REx-ID: 4458
Henzinger, Thomas A., et al. Abstractions from Proofs. ACM, 2004, pp. 232–44, doi:10.1145/964001.964021.
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2004 | Book Chapter | IST-REx-ID: 4461
Henzinger, Thomas A., et al. “Extreme Model Checking.” Verification: Theory and Practice, vol. 2772, Springer, 2004, pp. 332–58, doi:10.1007/978-3-540-39910-0_16.
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2004 | Conference Paper | IST-REx-ID: 4459
Henzinger, Thomas A., et al. Race Checking by Context Inference. ACM, 2004, pp. 1–13, doi:10.1145/996841.996844.
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2004 | Conference Paper | IST-REx-ID: 4525
Ghosal, Arkadeb, et al. Event-Driven Programming with Logical Execution Times. Vol. 2993, Springer, 2004, pp. 167–70, doi:10.1007/978-3-540-24743-2_24.
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2004 | Conference Paper | IST-REx-ID: 4555
Chatterjee, Krishnendu, et al. Trading Memory for Randomness. IEEE, 2004, pp. 206–17, doi:10.1109/QEST.2004.10051.
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2004 | Conference Paper | IST-REx-ID: 4558
Chatterjee, Krishnendu, et al. Quantitative Stochastic Parity Games. SIAM, 2004, pp. 121–30.
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2004 | Journal Article | IST-REx-ID: 4556
Chatterjee, Krishnendu, et al. “Stack Size Analysis for Interrupt-Driven Programs.” Information and Computation, vol. 194, no. 2, Elsevier, 2004, pp. 144–74, doi:10.1016/j.ic.2004.06.001.
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2004 | Conference Paper | IST-REx-ID: 4578
Beyer, Dirk, et al. The BLAST Query Language for Software Verification. Vol. 3148, Springer, 2004, pp. 2–18, doi:10.1007/978-3-540-27864-1_2.
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2004 | Conference Paper | IST-REx-ID: 4577
Beyer, Dirk, et al. An Eclipse Plug-in for Model Checking. IEEE, 2004, pp. 251–55, doi:10.1109/WPC.2004.1311069 .
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2004 | Conference Paper | IST-REx-ID: 4581
Beyer, Dirk, et al. Generating Tests from Counterexamples. IEEE, 2004, pp. 326–35, doi:10.1109/ICSE.2004.1317455.
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2004 | Conference Paper | IST-REx-ID: 4629
De Alfaro, Luca, et al. Model Checking Discounted Temporal Properties. Vol. 2988, Springer, 2004, pp. 77–92, doi:10.1007/978-3-540-24730-2_6.
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2004 | Journal Article | IST-REx-ID: 6155
Cheung, Benny H. .., et al. “Soluble Guanylate Cyclases Act in Neurons Exposed to the Body Fluid to Promote C. Elegans Aggregation Behavior.” Current Biology, vol. 14, no. 12, Elsevier, 2004, pp. 1105–11, doi:10.1016/j.cub.2004.06.027.
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2004 | Journal Article | IST-REx-ID: 7334
Mantzaras, John, et al. “Fuel Cell Modeling and Simulations.” CHIMIA International Journal for Chemistry, vol. 58, no. 12, Swiss Chemical Society, 2004, pp. 857–68, doi:10.2533/000942904777677029.
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2004 | Journal Article | IST-REx-ID: 7333
Santis, M., et al. “Modular Stack-Internal Air Humidification Concept-Verification in a 1 KW Stack.” Fuel Cells, vol. 4, no. 3, Wiley, 2004, pp. 214–18, doi:10.1002/fuce.200400028.
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2004 | Journal Article | IST-REx-ID: 864
Panchenko, Anna, et al. “Prediction of Functional Sites by Analysis of Sequence and Structure Conservation.” Protein Science, vol. 13, no. 4, Wiley-Blackwell, 2004, pp. 884–92, doi:10.1110/ps.03465504.
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2004 | Journal Article | IST-REx-ID: 870
Kondrashov, Fyodor, et al. “Bioinformatical Assay of Human Gene Morbidity.” Nucleic Acids Research, vol. 32, no. 5, Oxford University Press, 2004, pp. 1731–37, doi:10.1093/nar/gkh330.
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2004 | Journal Article | IST-REx-ID: 875
Kondrashov, Fyodor, and Eugene Koonin. “A Common Framework for Understanding the Origin of Genetic Dominance and Evolutionary Fates of Gene Duplications.” Trends in Genetics, vol. 20, no. 7, Elsevier, 2004, pp. 287–91, doi:10.1016/j.tig.2004.05.001.
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2004 | Journal Article | IST-REx-ID: 889
Kern, Andrew, and Fyodor Kondrashov. “Mechanisms and Convergence of Compensatory Evolution in Mammalian Mitochondrial TRNAs.” Nature Genetics, vol. 36, no. 11, Nature Publishing Group, 2004, pp. 1207–12, doi:10.1038/ng1451.
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2004 | Journal Article | IST-REx-ID: 9493 |
Zilberman, Daniel, et al. “Role of Arabidopsis ARGONAUTE4 in RNA-Directed DNA Methylation Triggered by Inverted Repeats.” Current Biology, vol. 14, no. 13, Elsevier, 2004, pp. 1214–20, doi:10.1016/j.cub.2004.06.055.
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