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4133 Publications
2023 | Journal Article | IST-REx-ID: 14039 |
The membrane surface as a platform that organizes cellular and biochemical processes
T.A. Leonard, M. Loose, S. Martens, Developmental Cell 58 (2023) 1315–1332.
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T.A. Leonard, M. Loose, S. Martens, Developmental Cell 58 (2023) 1315–1332.
2023 | Journal Article | IST-REx-ID: 14040 |
The Ycf48 accessory factor occupies the site of the oxygen-evolving manganese cluster during photosystem II biogenesis
Z. Zhao, I. Vercellino, J. Knoppová, R. Sobotka, J.W. Murray, P.J. Nixon, L.A. Sazanov, J. Komenda, Nature Communications 14 (2023).
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Z. Zhao, I. Vercellino, J. Knoppová, R. Sobotka, J.W. Murray, P.J. Nixon, L.A. Sazanov, J. Komenda, Nature Communications 14 (2023).
2023 | Conference Paper | IST-REx-ID: 13967 |
Stopping criteria for value iteration on stochastic games with quantitative objectives
J. Kretinsky, T. Meggendorfer, M. Weininger, in:, 38th Annual ACM/IEEE Symposium on Logic in Computer Science, Institute of Electrical and Electronics Engineers, 2023.
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J. Kretinsky, T. Meggendorfer, M. Weininger, in:, 38th Annual ACM/IEEE Symposium on Logic in Computer Science, Institute of Electrical and Electronics Engineers, 2023.
2023 | Journal Article | IST-REx-ID: 13965 |
Concepts, mechanisms and implications of long-term epigenetic inheritance
E. Hollwey, A. Briffa, M. Howard, D. Zilberman, Current Opinion in Genetics and Development 81 (2023).
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E. Hollwey, A. Briffa, M. Howard, D. Zilberman, Current Opinion in Genetics and Development 81 (2023).
2023 | Thesis | IST-REx-ID: 14058 |
The molecular basis of sexual dimorphism: Experimental and theoretical characterization of phenotypic, transcriptomic and genetic patterns of sex-specific adaptation
G. Puixeu Sala, The Molecular Basis of Sexual Dimorphism: Experimental and Theoretical Characterization of Phenotypic, Transcriptomic and Genetic Patterns of Sex-Specific Adaptation, Institute of Science and Technology Austria, 2023.
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G. Puixeu Sala, The Molecular Basis of Sexual Dimorphism: Experimental and Theoretical Characterization of Phenotypic, Transcriptomic and Genetic Patterns of Sex-Specific Adaptation, Institute of Science and Technology Austria, 2023.
2023 | Journal Article | IST-REx-ID: 14077 |
Sex-specific estimation of cis and trans regulation of gene expression in heads and gonads of Drosophila melanogaster
G. Puixeu Sala, A. Macon, B. Vicoso, G3: Genes, Genomes, Genetics 13 (2023).
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G. Puixeu Sala, A. Macon, B. Vicoso, G3: Genes, Genomes, Genetics 13 (2023).
2023 | Journal Article | IST-REx-ID: 13988 |
Practical limitations of Ethereum’s layer-2
R. Neiheiser, G. Inacio, L. Rech, C. Montez, M. Matos, L. Rodrigues, IEEE Access 11 (2023) 8651–8662.
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R. Neiheiser, G. Inacio, L. Rech, C. Montez, M. Matos, L. Rodrigues, IEEE Access 11 (2023) 8651–8662.
2023 | Research Data | IST-REx-ID: 12933 |
Data from: Sex-specific estimation of cis and trans regulation of gene expression in heads and gonads of Drosophila melanogaster
G. Puixeu Sala, (2023).
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G. Puixeu Sala, (2023).
2023 | Journal Article | IST-REx-ID: 14245 |
Horospherical coordinates of lattice points in hyperbolic spaces: Effective counting and equidistribution
T. Horesh, A. Nevo, Pacific Journal of Mathematics 324 (2023) 265–294.
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T. Horesh, A. Nevo, Pacific Journal of Mathematics 324 (2023) 265–294.
2023 | Journal Article | IST-REx-ID: 14246 |
Emergence of a Bose polaron in a small ring threaded by the Aharonov-Bohm flux
F. Brauneis, A. Ghazaryan, H.-W. Hammer, A. Volosniev, Communications Physics 6 (2023).
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F. Brauneis, A. Ghazaryan, H.-W. Hammer, A. Volosniev, Communications Physics 6 (2023).
2023 | Journal Article | IST-REx-ID: 14239 |
Homological Bondal-Orlov localization conjecture for rational singularities
M. Mauri, E. Shinder, Forum of Mathematics, Sigma 11 (2023).
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M. Mauri, E. Shinder, Forum of Mathematics, Sigma 11 (2023).
2023 | Journal Article | IST-REx-ID: 14192 |
On the global minimum of the energy–momentum relation for the polaron
J. Lampart, D.J. Mitrouskas, K. Mysliwy, Mathematical Physics, Analysis and Geometry 26 (2023).
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J. Lampart, D.J. Mitrouskas, K. Mysliwy, Mathematical Physics, Analysis and Geometry 26 (2023).
2023 | Journal Article | IST-REx-ID: 14238 |
Nonadiabatic laser-induced alignment dynamics of molecules on a surface
L. Kranabetter, H.H. Kristensen, A. Ghazaryan, C.A. Schouder, A.S. Chatterley, P. Janssen, F. Jensen, R.E. Zillich, M. Lemeshko, H. Stapelfeldt, Physical Review Letters 131 (2023).
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L. Kranabetter, H.H. Kristensen, A. Ghazaryan, C.A. Schouder, A.S. Chatterley, P. Janssen, F. Jensen, R.E. Zillich, M. Lemeshko, H. Stapelfeldt, Physical Review Letters 131 (2023).
2023 | Journal Article | IST-REx-ID: 14255 |
The phenuivirus Toscana virus makes an atypical use of vacuolar acidity to enter host cells
J. Koch, Q. Xin, M. Obr, A. Schäfer, N. Rolfs, H.A. Anagho, A. Kudulyte, L. Woltereck, S. Kummer, J. Campos, Z.M. Uckeley, L. Bell-Sakyi, H.G. Kräusslich, F.K. Schur, C. Acuna, P.Y. Lozach, PLoS Pathogens 19 (2023).
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J. Koch, Q. Xin, M. Obr, A. Schäfer, N. Rolfs, H.A. Anagho, A. Kudulyte, L. Woltereck, S. Kummer, J. Campos, Z.M. Uckeley, L. Bell-Sakyi, H.G. Kräusslich, F.K. Schur, C. Acuna, P.Y. Lozach, PLoS Pathogens 19 (2023).
2023 | Journal Article | IST-REx-ID: 14339 |
Antigravitropic PIN polarization maintains non-vertical growth in lateral roots
S. Roychoudhry, K. Sageman-Furnas, C. Wolverton, P. Grones, S. Tan, G. Molnar, M. De Angelis, H. Goodman, N. Capstaff, L. JPB, J. Mullen, R. Hangarter, J. Friml, S. Kepinski, Nature Plants 9 (2023) 1500–1513.
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S. Roychoudhry, K. Sageman-Furnas, C. Wolverton, P. Grones, S. Tan, G. Molnar, M. De Angelis, H. Goodman, N. Capstaff, L. JPB, J. Mullen, R. Hangarter, J. Friml, S. Kepinski, Nature Plants 9 (2023) 1500–1513.
2023 | Journal Article | IST-REx-ID: 14363 |
Mitochondrial network adaptations of microglia reveal sex-specific stress response after injury and UCP2 knockout
M.E. Maes, G. Colombo, F.E. Schoot Uiterkamp, F. Sternberg, A. Venturino, E.E. Pohl, S. Siegert, IScience 26 (2023).
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M.E. Maes, G. Colombo, F.E. Schoot Uiterkamp, F. Sternberg, A. Venturino, E.E. Pohl, S. Siegert, IScience 26 (2023).
2023 | Journal Article | IST-REx-ID: 14343 |
Gaussian fluctuations in the equipartition principle for Wigner matrices
G. Cipolloni, L. Erdös, S.J. Henheik, O. Kolupaiev, Forum of Mathematics, Sigma 11 (2023).
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G. Cipolloni, L. Erdös, S.J. Henheik, O. Kolupaiev, Forum of Mathematics, Sigma 11 (2023).
2023 | Journal Article | IST-REx-ID: 14364 |
Why extension-based proofs fail
D.-A. Alistarh, J. Aspnes, F. Ellen, R. Gelashvili, L. Zhu, SIAM Journal on Computing 52 (2023) 913–944.
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D.-A. Alistarh, J. Aspnes, F. Ellen, R. Gelashvili, L. Zhu, SIAM Journal on Computing 52 (2023) 913–944.
2023 | Journal Article | IST-REx-ID: 14345 |
On angles in higher order Brillouin tessellations and related tilings in the plane
H. Edelsbrunner, A. Garber, M. Ghafari, T. Heiss, M. Saghafian, Discrete and Computational Geometry (2023).
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H. Edelsbrunner, A. Garber, M. Ghafari, T. Heiss, M. Saghafian, Discrete and Computational Geometry (2023).
2023 | Journal Article | IST-REx-ID: 14378 |
Self-organized and directed branching results in optimal coverage in developing dermal lymphatic networks
M.C. Ucar, E.B. Hannezo, E. Tiilikainen, I. Liaqat, E. Jakobsson, H. Nurmi, K. Vaahtomeri, Nature Communications 14 (2023).
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M.C. Ucar, E.B. Hannezo, E. Tiilikainen, I. Liaqat, E. Jakobsson, H. Nurmi, K. Vaahtomeri, Nature Communications 14 (2023).
2023 | Journal Article | IST-REx-ID: 14361 |
Synchronization in collectively moving inanimate and living active matter
M. Riedl, I.D. Mayer, J. Merrin, M.K. Sixt, B. Hof, Nature Communications 14 (2023).
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M. Riedl, I.D. Mayer, J. Merrin, M.K. Sixt, B. Hof, Nature Communications 14 (2023).
2023 | Journal Article | IST-REx-ID: 14421 |
Creation rate of Dirac particles at a point source
S.J. Henheik, R. Tumulka, Journal of Physics A: Mathematical and Theoretical 56 (2023).
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S.J. Henheik, R. Tumulka, Journal of Physics A: Mathematical and Theoretical 56 (2023).
2023 | Journal Article | IST-REx-ID: 14400 |
Symbolic control for stochastic systems via finite parity games
R. Majumdar, K. Mallik, A.K. Schmuck, S. Soudjani, Nonlinear Analysis: Hybrid Systems 51 (2023).
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R. Majumdar, K. Mallik, A.K. Schmuck, S. Soudjani, Nonlinear Analysis: Hybrid Systems 51 (2023).
2023 | Journal Article | IST-REx-ID: 14425 |
Mechanistic insight on water dissociation on pristine low-index TiO2 surfaces from machine learning molecular dynamics simulations
Z. Zeng, F. Wodaczek, K. Liu, F. Stein, J. Hutter, J. Chen, B. Cheng, Nature Communications 14 (2023).
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Z. Zeng, F. Wodaczek, K. Liu, F. Stein, J. Hutter, J. Chen, B. Cheng, Nature Communications 14 (2023).
2023 | Journal Article | IST-REx-ID: 14453 |
Extreme precipitation in tropical squall lines
S. Abramian, C.J. Muller, C. Risi, Journal of Advances in Modeling Earth Systems 15 (2023).
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S. Abramian, C.J. Muller, C. Risi, Journal of Advances in Modeling Earth Systems 15 (2023).
2023 | Journal Article | IST-REx-ID: 14463 |
Chromosomal inversion polymorphisms are widespread across the species ranges of rough periwinkles (Littorina saxatilis and L. arcana)
J. Reeve, R.K. Butlin, E.L. Koch, S. Stankowski, R. Faria, Molecular Ecology (2023).
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J. Reeve, R.K. Butlin, E.L. Koch, S. Stankowski, R. Faria, Molecular Ecology (2023).
2023 | Journal Article | IST-REx-ID: 14455 |
Tempering expectations: Considerations on the current state of stem cells therapy for autism treatment
A. Narzisi, A. Halladay, G. Masi, G. Novarino, C. Lord, Frontiers in Psychiatry 14 (2023).
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A. Narzisi, A. Halladay, G. Masi, G. Novarino, C. Lord, Frontiers in Psychiatry 14 (2023).
2023 | Journal Article | IST-REx-ID: 14427 |
Length spectrum rigidity for piecewise analytic Bunimovich billiards
J. Chen, V. Kaloshin, H.K. Zhang, Communications in Mathematical Physics (2023).
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J. Chen, V. Kaloshin, H.K. Zhang, Communications in Mathematical Physics (2023).
2023 | Journal Article | IST-REx-ID: 14464 |
Optimal embedded and enclosing isosceles triangles
Á. Ambrus, M. Csikós, G. Kiss, J. Pach, G. Somlai, International Journal of Foundations of Computer Science 34 (2023) 737–760.
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Á. Ambrus, M. Csikós, G. Kiss, J. Pach, G. Somlai, International Journal of Foundations of Computer Science 34 (2023) 737–760.
2023 | Journal Article | IST-REx-ID: 14449 |
Advancing microbiome research with machine learning: Key findings from the ML4Microbiome COST action
D’Elia D, Truu J, Lahti L, Berland M, Papoutsoglou G, Ceci M, Zomer A, Lopes MB, Ibrahimi E, Gruca A, Nechyporenko A, Frohme M, Klammsteiner T, Pau ECDS, Marcos-Zambrano LJ, Hron K, Pio G, Simeon A, Suharoschi R, Moreno-Indias I, Temko A, Nedyalkova M, Apostol ES, Truică CO, Shigdel R, Telalović JH, Bongcam-Rudloff E, Przymus P, Jordamović NB, Falquet L, Tarazona S, Sampri A, Isola G, Pérez-Serrano D, Trajkovik V, Klucar L, Loncar-Turukalo T, Havulinna AS, Jansen C, Bertelsen RJ, Claesson MJ. 2023. Advancing microbiome research with machine learning: Key findings from the ML4Microbiome COST action. Frontiers in Microbiology. 14, 1257002.
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D’Elia D, Truu J, Lahti L, Berland M, Papoutsoglou G, Ceci M, Zomer A, Lopes MB, Ibrahimi E, Gruca A, Nechyporenko A, Frohme M, Klammsteiner T, Pau ECDS, Marcos-Zambrano LJ, Hron K, Pio G, Simeon A, Suharoschi R, Moreno-Indias I, Temko A, Nedyalkova M, Apostol ES, Truică CO, Shigdel R, Telalović JH, Bongcam-Rudloff E, Przymus P, Jordamović NB, Falquet L, Tarazona S, Sampri A, Isola G, Pérez-Serrano D, Trajkovik V, Klucar L, Loncar-Turukalo T, Havulinna AS, Jansen C, Bertelsen RJ, Claesson MJ. 2023. Advancing microbiome research with machine learning: Key findings from the ML4Microbiome COST action. Frontiers in Microbiology. 14, 1257002.
2023 | Journal Article | IST-REx-ID: 13125 |
Recursive greedy initialization of the quantum approximate optimization algorithm with guaranteed improvement
S. Sack, R.A. Medina Ramos, R. Kueng, M. Serbyn, Physical Review A 107 (2023).
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S. Sack, R.A. Medina Ramos, R. Kueng, M. Serbyn, Physical Review A 107 (2023).
2023 | Journal Article | IST-REx-ID: 14445 |
Coboundary expansion, equivariant overlap, and crossing numbers of simplicial complexes
U. Wagner, P. Wild, Israel Journal of Mathematics 256 (2023) 675–717.
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U. Wagner, P. Wild, Israel Journal of Mathematics 256 (2023) 675–717.
2023 | Journal Article | IST-REx-ID: 14447 |
New fluorescent auxin derivatives: anti-auxin activity and accumulation patterns in Arabidopsis thaliana
K. Bieleszová, P. Hladík, M. Kubala, R. Napier, F. Brunoni, Z. Gelová, L. Fiedler, I. Kulich, M. Strnad, K. Doležal, O. Novák, J. Friml, A. Žukauskaitė, Plant Growth Regulation (2023).
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K. Bieleszová, P. Hladík, M. Kubala, R. Napier, F. Brunoni, Z. Gelová, L. Fiedler, I. Kulich, M. Strnad, K. Doležal, O. Novák, J. Friml, A. Žukauskaitė, Plant Growth Regulation (2023).
2023 | Journal Article | IST-REx-ID: 14683 |
Protocol for sorting cells from mouse brains labeled with mosaic analysis with double markers by flow cytometry
N. Amberg, G.T. Cheung, S. Hippenmeyer, STAR Protocols 5 (2023).
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N. Amberg, G.T. Cheung, S. Hippenmeyer, STAR Protocols 5 (2023).
2023 | Journal Article | IST-REx-ID: 12486 |
Delayed blow-up and enhanced diffusion by transport noise for systems of reaction-diffusion equations
A. Agresti, Stochastics and Partial Differential Equations: Analysis and Computations (2023).
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A. Agresti, Stochastics and Partial Differential Equations: Analysis and Computations (2023).
2023 | Journal Article | IST-REx-ID: 14665 |
Multiple packing: Lower bounds via error exponents
Y. Zhang, S. Vatedka, IEEE Transactions on Information Theory (2023).
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Y. Zhang, S. Vatedka, IEEE Transactions on Information Theory (2023).
2023 | Conference Paper | IST-REx-ID: 14693 |
(Verifiable) delay functions from Lucas sequences
C. Hoffmann, P. Hubáček, C. Kamath, T. Krňák, in:, 21st International Conference on Theory of Cryptography, Springer Nature, 2023, pp. 336–362.
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C. Hoffmann, P. Hubáček, C. Kamath, T. Krňák, in:, 21st International Conference on Theory of Cryptography, Springer Nature, 2023, pp. 336–362.
2023 | Conference Paper | IST-REx-ID: 14691 |
On the cost of post-compromise security in concurrent Continuous Group-Key Agreement
B. Auerbach, M. Cueto Noval, G. Pascual Perez, K.Z. Pietrzak, in:, 21st International Conference on Theory of Cryptography, Springer Nature, 2023, pp. 271–300.
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B. Auerbach, M. Cueto Noval, G. Pascual Perez, K.Z. Pietrzak, in:, 21st International Conference on Theory of Cryptography, Springer Nature, 2023, pp. 271–300.
2023 | Conference Paper | IST-REx-ID: 14692 |
Generic-group lower bounds via reductions between geometric-search problems: With and without preprocessing
B. Auerbach, C. Hoffmann, G. Pascual Perez, in:, 21st International Conference on Theory of Cryptography, Springer Nature, 2023, pp. 301–330.
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B. Auerbach, C. Hoffmann, G. Pascual Perez, in:, 21st International Conference on Theory of Cryptography, Springer Nature, 2023, pp. 301–330.
2023 | Journal Article | IST-REx-ID: 14690 |
Boundary multifractality in the spin quantum Hall symmetry class with interaction
S. Babkin, I. Burmistrov, Physical Review B 108 (2023).
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S. Babkin, I. Burmistrov, Physical Review B 108 (2023).
2023 | Journal Article | IST-REx-ID: 14360 |
Sensing their plasma membrane curvature allows migrating cells to circumvent obstacles
E. Sitarska, S.D. Almeida, M.S. Beckwith, J.A. Stopp, J. Czuchnowski, M. Siggel, R. Roessner, A. Tschanz, C. Ejsing, Y. Schwab, J. Kosinski, M.K. Sixt, A. Kreshuk, A. Erzberger, A. Diz-Muñoz, Nature Communications 14 (2023).
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E. Sitarska, S.D. Almeida, M.S. Beckwith, J.A. Stopp, J. Czuchnowski, M. Siggel, R. Roessner, A. Tschanz, C. Ejsing, Y. Schwab, J. Kosinski, M.K. Sixt, A. Kreshuk, A. Erzberger, A. Diz-Muñoz, Nature Communications 14 (2023).
2023 | Journal Article | IST-REx-ID: 14274 |
CCR7 acts as both a sensor and a sink for CCL19 to coordinate collective leukocyte migration
J.H. Alanko, M.C. Ucar, N. Canigova, J.A. Stopp, J. Schwarz, J. Merrin, E.B. Hannezo, M.K. Sixt, Science Immunology 8 (2023).
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J.H. Alanko, M.C. Ucar, N. Canigova, J.A. Stopp, J. Schwarz, J. Merrin, E.B. Hannezo, M.K. Sixt, Science Immunology 8 (2023).
2023 | Thesis | IST-REx-ID: 14651 |
Investigating inbreeding depression and the self-incompatibility locus of Antirrhinum majus
L.S. Arathoon, Investigating Inbreeding Depression and the Self-Incompatibility Locus of Antirrhinum Majus, Institute of Science and Technology Austria, 2023.
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L.S. Arathoon, Investigating Inbreeding Depression and the Self-Incompatibility Locus of Antirrhinum Majus, Institute of Science and Technology Austria, 2023.
2023 | Preprint | IST-REx-ID: 14703 |
Quantitative convergence of a discretization of dynamic optimal transport using the dual formulation
S. Ishida, H. Lavenant, ArXiv (n.d.).
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S. Ishida, H. Lavenant, ArXiv (n.d.).
2023 | Journal Article | IST-REx-ID: 14716 |
Machine learning and phylogenetic analysis allow for predicting antibiotic resistance in M. tuberculosis
A. Yurtseven, S. Buyanova, A.A.A. Agrawal, O. Bochkareva, O.V.V. Kalinina, BMC Microbiology 23 (2023).
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A. Yurtseven, S. Buyanova, A.A.A. Agrawal, O. Bochkareva, O.V.V. Kalinina, BMC Microbiology 23 (2023).
2023 | Conference Paper | IST-REx-ID: 14718 |
Binary decision diagrams on modern hardware
S. Pastva, T.A. Henzinger, in:, Proceedings of the 23rd Conference on Formal Methods in Computer-Aided Design, TU Vienna Academic Press, 2023, pp. 122–131.
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S. Pastva, T.A. Henzinger, in:, Proceedings of the 23rd Conference on Formal Methods in Computer-Aided Design, TU Vienna Academic Press, 2023, pp. 122–131.
2023 | Journal Article | IST-REx-ID: 14717 |
Equidistribution of primitive lattices in ℝn
T. Horesh, Y. Karasik, Quarterly Journal of Mathematics 74 (2023) 1253–1294.
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T. Horesh, Y. Karasik, Quarterly Journal of Mathematics 74 (2023) 1253–1294.
2023 | Journal Article | IST-REx-ID: 14715 |
Exponential decay of the number of excitations in the weakly interacting Bose gas
D.J. Mitrouskas, P. Pickl, Journal of Mathematical Physics 64 (2023).
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D.J. Mitrouskas, P. Pickl, Journal of Mathematical Physics 64 (2023).
2023 | Journal Article | IST-REx-ID: 14240 |
Generalizing shallow water simulations with dispersive surface waves
S. Jeschke, C. Wojtan, ACM Transactions on Graphics 42 (2023).
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S. Jeschke, C. Wojtan, ACM Transactions on Graphics 42 (2023).
2023 | Journal Article | IST-REx-ID: 14710 |
A computational toolbox for the assembly yield of complex and heterogeneous structures
A.I. Curatolo, O. Kimchi, C.P. Goodrich, R.K. Krueger, M.P. Brenner, Nature Communications 14 (2023).
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A.I. Curatolo, O. Kimchi, C.P. Goodrich, R.K. Krueger, M.P. Brenner, Nature Communications 14 (2023).