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1902 Publications


2010 | Conference Paper | IST-REx-ID: 3719   OA
J. Feret, T. A. Henzinger, H. Koeppl, and T. Petrov, “Lumpability abstractions of rule-based systems,” presented at the MECBIC: Membrane Computing and Biologically Inspired Process Calculi, Jena, Germany, 2010, vol. 40, pp. 142–161.
View | Files available | arXiv
 

2010 | Journal Article | IST-REx-ID: 3776   OA
N. H. Barton, “Genetic linkage and natural selection,” Philosophical Transactions of the Royal Society of London. Series B, Biological Sciences, vol. 365, no. 1552, pp. 2559–2569, 2010.
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2010 | Journal Article | IST-REx-ID: 3790   OA
A. Diz Muñoz et al., “Control of directed cell migration in vivo by membrane-to-cortex attachment,” PLoS Biology, vol. 8, no. 11, 2010.
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2010 | Book Chapter | IST-REx-ID: 3795   OA
H. Edelsbrunner, D. Morozov, and A. Patel, “The stability of the apparent contour of an orientable 2-manifold,” in Topological Data Analysis and Visualization: Theory, Algorithms and Applications, Springer, 2010, pp. 27–42.
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2010 | Journal Article | IST-REx-ID: 3834   OA
V. Wolf, R. Goel, M. Mateescu, and T. A. Henzinger, “Solving the chemical master equation using sliding windows,” BMC Systems Biology, vol. 4, no. 42, pp. 1–19, 2010.
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2010 | Conference Paper | IST-REx-ID: 3839   OA
T. A. Henzinger, T. Hottelier, L. Kovács, and A. Voronkov, “Invariant and type inference for matrices,” presented at the VMCAI: Verification, Model Checking and Abstract Interpretation, Madrid, Spain, 2010, vol. 5944, pp. 163–179.
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2010 | Conference Paper | IST-REx-ID: 3853   OA
K. Chatterjee, L. Doyen, H. Edelsbrunner, T. A. Henzinger, and P. Rannou, “Mean-payoff automaton expressions,” presented at the CONCUR: Concurrency Theory, Paris, France, 2010, vol. 6269, pp. 269–283.
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2010 | Journal Article | IST-REx-ID: 4243   OA
N. H. Barton, A. Etheridge, and A. Véber, “A new model for evolution in a spatial continuum,” Electronic Journal of Probability, vol. 15, no. 7, pp. 162–216, 2010.
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2010 | Conference Paper | IST-REx-ID: 4382   OA
R. Guerraoui, T. A. Henzinger, M. Kapalka, and V. Singh, “Transactions in the jungle,” presented at the SPAA: ACM Symposium on Parallel Algorithms and Architectures, Santorini, Greece, 2010, pp. 263–272.
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2010 | Conference Paper | IST-REx-ID: 3860   OA
K. Chatterjee, L. Doyen, T. A. Henzinger, and J. Raskin, “Generalized mean-payoff and energy games,” presented at the FSTTCS: Foundations of Software Technology and Theoretical Computer Science, Chennai, India, 2010, vol. 8, pp. 505–516.
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2010 | Conference Paper | IST-REx-ID: 3858   OA
K. Chatterjee and L. Doyen, “The complexity of partial-observation parity games,” presented at the LPAR: Logic for Programming, Artificial Intelligence, and Reasoning, Yogyakarta, Indonesia, 2010, vol. 6397, pp. 1–14.
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2010 | Journal Article | IST-REx-ID: 3772   OA
N. H. Barton, “Understanding adaptation in large populations,” PLoS Genetics, vol. 6, no. 6, 2010.
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2010 | Journal Article | IST-REx-ID: 3777   OA
N. H. Barton, “Mutation and the evolution of recombination,” Philosophical Transactions of the Royal Society of London. Series B, Biological Sciences, vol. 365, no. 1544, pp. 1281–1294, 2010.
View | DOI | Download (ext.) | PubMed | Europe PMC
 

2010 | Conference Paper | IST-REx-ID: 3847   OA
F. Didier, T. A. Henzinger, M. Mateescu, and V. Wolf, “SABRE: A tool for the stochastic analysis of biochemical reaction networks,” presented at the QEST: Quantitative Evaluation of Systems, Williamsburg, USA, 2010, pp. 193–194.
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2010 | Conference Paper | IST-REx-ID: 3866   OA
R. Bloem, K. Chatterjee, K. Greimel, T. A. Henzinger, and B. Jobstmann, “Robustness in the presence of liveness,” presented at the CAV: Computer Aided Verification, Edinburgh, UK, 2010, vol. 6174, pp. 410–424.
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2010 | Conference Paper | IST-REx-ID: 4369   OA
D. Nickovic and N. Piterman, “From MTL to deterministic timed automata,” presented at the FORMATS: Formal Modeling and Analysis of Timed Systems, Klosterneuburg, Austria, 2010, vol. 6246, pp. 152–167.
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2010 | Conference Paper | IST-REx-ID: 4388   OA
K. Chatterjee, T. A. Henzinger, B. Jobstmann, and A. Radhakrishna, “GIST: A solver for probabilistic games,” presented at the CAV: Computer Aided Verification, Edinburgh, UK, 2010, vol. 6174, pp. 665–669.
View | Files available | DOI | arXiv
 

2010 | Conference Paper | IST-REx-ID: 4390   OA
P. Cerny, A. Radhakrishna, D. Zufferey, S. Chaudhuri, and R. Alur, “Model checking of linearizability of concurrent list implementations,” presented at the CAV: Computer Aided Verification, Edinburgh, UK, 2010, vol. 6174, pp. 465–479.
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2010 | Journal Article | IST-REx-ID: 3773   OA
N. H. Barton, “What role does natural selection play in speciation?,” Philosophical Transactions of the Royal Society of London. Series B, Biological Sciences, vol. 365, no. 1547, pp. 1825–1840, 2010.
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2010 | Journal Article | IST-REx-ID: 3901   OA
P. Bendich, H. Edelsbrunner, and M. Kerber, “Computing robustness and persistence for images,” IEEE Transactions of Visualization and Computer Graphics, vol. 16, no. 6, pp. 1251–1260, 2010.
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2010 | Book | IST-REx-ID: 4346   OA
P. Danowski and J. Bergmann, Handbuch Bibliothek 2.0. De Gruyter, 2010.
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2010 | Book Chapter | IST-REx-ID: 4339   OA
J. Bergmann and P. Danowski, “Ist Bibliothek 2.0 überhaupt noch relevant? – Eine Einleitung in das Handbuch,” in Handbuch Bibliothek 2.0, J. Bergmann and P. Danowski, Eds. De Gruyter, 2010, pp. 5–20.
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2010 | Conference Paper | IST-REx-ID: 4396   OA
D. Beyer, T. A. Henzinger, G. Théoduloz, and D. Zufferey, “Shape refinement through explicit heap analysis,” presented at the FASE: Fundamental Approaches To Software Engineering, Paphos, Cyprus, 2010, vol. 6013, pp. 263–277.
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2010 | Conference Paper | IST-REx-ID: 4389   OA
L. Doyen, T. A. Henzinger, A. Legay, and D. Nickovic, “Robustness of sequential circuits,” presented at the ACSD: Application of Concurrency to System Design, 2010, pp. 77–84.
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2010 | Journal Article | IST-REx-ID: 2409   OA
A. Kupczok, H. Schmidt, and A. Von Haeseler, “Accuracy of phylogeny reconstruction methods combining overlapping gene data sets ,” Algorithms for Molecular Biology, vol. 5, no. 1, 2010.
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2010 | Journal Article | IST-REx-ID: 3779   OA
U. Rosas, N. H. Barton, L. Copsey, P. Barbier De Reuille, and E. Coen, “Cryptic variation between species and the basis of hybrid performance,” PLoS Biology, vol. 8, no. 7, 2010.
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2010 | Journal Article | IST-REx-ID: 3832   OA
J. Guzmán and P. M. Jonas, “Beyond TARPs: The growing list of auxiliary AMPAR subunits,” Neuron, vol. 66, no. 1, pp. 8–10, 2010.
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2010 | Conference Paper | IST-REx-ID: 3849   OA
P. Bendich, H. Edelsbrunner, M. Kerber, and A. Patel, “Persistent homology under non-uniform error,” presented at the MFCS: Mathematical Foundations of Computer Science, Brno, Czech Republic, 2010, vol. 6281, pp. 12–23.
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2010 | Journal Article | IST-REx-ID: 3868   OA
K. Chatterjee, L. De Alfaro, R. Majumdar, and V. Raman, “Algorithms for game metrics,” Logical Methods in Computer Science, vol. 6, no. 3, pp. 1–27, 2010.
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2010 | Journal Article | IST-REx-ID: 4157   OA
E. Papusheva and C.-P. J. Heisenberg, “Spatial organization of adhesion: force-dependent regulation and function in tissue morphogenesis,” EMBO Journal, vol. 29, no. 16, pp. 2753–2768, 2010.
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2010 | Conference Paper | IST-REx-ID: 4378   OA
V. Kuncak, R. Piskac, P. Suter, and T. Wies, “Building a calculus of data structures,” presented at the VMCAI: Verification, Model Checking and Abstract Interpretation, Madrid, Spain, 2010, vol. 5944, pp. 26–44.
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2010 | Conference Paper | IST-REx-ID: 4380   OA
T. A. Henzinger, A. Tomar, V. Singh, T. Wies, and D. Zufferey, “A marketplace for cloud resources,” presented at the EMSOFT: Embedded Software , Arizona, USA, 2010, pp. 1–8.
View | Files available | DOI
 

2010 | Conference Paper | IST-REx-ID: 488   OA
R. Alur and P. Cerny, “Expressiveness of streaming string transducers,” presented at the FSTTCS: Foundations of Software Technology and Theoretical Computer Science, Chennai, India, 2010, vol. 8, pp. 1–12.
View | Files available | DOI
 

2010 | Technical Report | IST-REx-ID: 5390   OA
K. Chatterjee and N. Fijalkow, Topological, automata-theoretic and logical characterization of finitary languages. IST Austria, 2010.
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2010 | Conference Paper | IST-REx-ID: 3793   OA
S. Nowozin, P. Gehler, and C. Lampert, “On parameter learning in CRF-based approaches to object class image segmentation,” presented at the ECCV: European Conference on Computer Vision, Heraklion, Crete, Greece, 2010, vol. 6316, pp. 98–111.
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2009 | Journal Article | IST-REx-ID: 3775   OA
N. H. Barton and J. Coe, “On the application of statistical physics to evolutionary biology,” Journal of Theoretical Biology, vol. 259, no. 2, pp. 317–324, 2009.
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2009 | Conference Paper | IST-REx-ID: 3871   OA
K. Chatterjee, L. Doyen, and T. A. Henzinger, “Probabilistic weighted automata,” presented at the CONCUR: Concurrency Theory, Bologna, Italy, 2009, vol. 5710, pp. 244–258.
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2009 | Journal Article | IST-REx-ID: 4242   OA
N. H. Barton and M. De Cara, “The evolution of strong reproductive isolation,” Evolution; International Journal of Organic Evolution, vol. 63, no. 5, pp. 1171–1190, 2009.
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2009 | Conference Paper | IST-REx-ID: 4545   OA
K. Chatterjee, L. Doyen, and T. A. Henzinger, “A survey of stochastic games with limsup and liminf objectives,” presented at the ICALP: Automata, Languages and Programming, Rhodos, Greece, 2009, vol. 5556, pp. 1–15.
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2009 | Conference Paper | IST-REx-ID: 4569   OA
R. Bloem, K. Chatterjee, T. A. Henzinger, and B. Jobstmann, “Better quality in synthesis through quantitative objectives,” presented at the CAV: Computer Aided Verification, Grenoble, France, 2009, vol. 5643, pp. 140–156.
View | DOI | Download (ext.) | arXiv
 

2009 | Conference Paper | IST-REx-ID: 3841   OA
T. A. Henzinger, B. Jobstmann, and V. Wolf, “Formalisms for specifying Markovian population models,” presented at the RP: Reachability Problems, Palaiseau, France, 2009, vol. 5797, pp. 3–23.
View | Files available | DOI
 

2009 | Technical Report | IST-REx-ID: 5392   OA
K. Chatterjee, Probabilistic automata on infinite words: Decidability and undecidability results. IST Austria, 2009.
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2009 | Conference Paper | IST-REx-ID: 4542   OA
K. Chatterjee, L. Doyen, and T. A. Henzinger, “Alternating weighted automata,” presented at the FCT: Fundamentals of Computation Theory, Wroclaw, Poland, 2009, vol. 5699, pp. 3–13.
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2009 | Journal Article | IST-REx-ID: 4136   OA
J. Polechova, N. H. Barton, and G. Marion, “Species’ range: Adaptation in space and time,” American Naturalist, vol. 174, no. 5, pp. E186–E204, 2009.
View | Files available | DOI | Download (ext.) | PubMed | Europe PMC
 

2009 | Journal Article | IST-REx-ID: 3780   OA
A. Davison, N. H. Barton, and B. Clarke, “The effect of chirality phenotype and genotype on the fecundity and viability of Partula suturalis and Lymnaea stagnalis: Implications for the evolution of sinistral snails,” Journal of Evolutionary Biology, vol. 22, no. 8, pp. 1624–1635, 2009.
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2009 | Conference Paper | IST-REx-ID: 3968   OA
H. Edelsbrunner and J. Harer, “The persistent Morse complex segmentation of a 3-manifold,” presented at the 3DPH: Modelling the Physiological Human, Zermatt, Switzerland, 2009, vol. 5903, pp. 36–50.
View | Files available | DOI
 

2009 | Technical Report | IST-REx-ID: 5394   OA
K. Chatterjee, T. A. Henzinger, and F. Horn, Improved lower bounds for request-response and finitary Streett games. IST Austria, 2009.
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2009 | Conference Paper | IST-REx-ID: 3843   OA
F. Didier, T. A. Henzinger, M. Mateescu, and V. Wolf, “Fast adaptive uniformization of the chemical master equation,” presented at the HIBI: High-Performance Computational Systems Biology, Trento, Italy, 2009, vol. 4, no. 6, pp. 118–127.
View | Files available | DOI
 

2009 | Conference Paper | IST-REx-ID: 3837   OA
S. Tripakis, B. Lickly, T. A. Henzinger, and E. Lee, “On relational interfaces,” in EMSOFT ’09 Proceedings of the seventh ACM international conference on Embedded software, Grenoble, France, 2009, pp. 67–76.
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2009 | Conference Paper | IST-REx-ID: 3844   OA
T. A. Henzinger, C. Kirsch, E. Marques, and A. Sokolova, “Distributed, modular HTL,” presented at the RTSS: Real-Time Systems Symposium, Washington, DC, United States, 2009, pp. 171–180.
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